RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 SLC35F4A4IF30 521 aa12.94□□□□□ -0.34
BNIP3-202ENST00000540159 FOXE1O00358 373 aaPredicted RBP12.94□□□□□ -0.34
BNIP3-202ENST00000540159 PRKYO43930 277 aa12.94□□□□□ -0.34
BNIP3-202ENST00000540159 IFNA14P01570 189 aa12.94□□□□□ -0.34
BNIP3-202ENST00000540159 PRNPP04156 253 aa12.94□□□□□ -0.34
BNIP3-202ENST00000540159 DDCP20711 480 aa12.94□□□□□ -0.34
BNIP3-202ENST00000540159 UQCRC2P22695 453 aa12.94□□□□□ -0.34
BNIP3-202ENST00000540159 KRT33BQ14525 404 aa12.94□□□□□ -0.34
BNIP3-202ENST00000540159 AGAP7PQ5VUJ5 663 aa12.94□□□□□ -0.34
BNIP3-202ENST00000540159 GDPD3Q7L5L3 318 aa12.94□□□□□ -0.34
BNIP3-202ENST00000540159 CAMKK1Q8N5S9 505 aa12.94□□□□□ -0.34
BNIP3-202ENST00000540159 DTX3Q8N9I9 347 aa12.94□□□□□ -0.34
BNIP3-202ENST00000540159 LINC01555Q8NAE3 123 aa12.94□□□□□ -0.34
BNIP3-202ENST00000540159 DENND6BQ8NEG7 585 aa12.94□□□□□ -0.34
BNIP3-202ENST00000540159 KBTBD8Q8NFY9 601 aa12.94□□□□□ -0.34
BNIP3-202ENST00000540159 GANCQ8TET4 914 aa12.94□□□□□ -0.34
BNIP3-202ENST00000540159 FCGR1BQ92637 280 aa12.94□□□□□ -0.34
BNIP3-202ENST00000540159 HHIPL1Q96JK4 782 aa12.94□□□□□ -0.34
BNIP3-202ENST00000540159 TEFMQ96QE5 360 aaKnown RBP12.94□□□□□ -0.34
BNIP3-202ENST00000540159 BEX2Q9BXY8 128 aa12.94□□□□□ -0.34
BNIP3-202ENST00000540159 UCK2Q9BZX2 261 aa12.94□□□□□ -0.34
BNIP3-202ENST00000540159 SLC6A17Q9H1V8 727 aa12.94□□□□□ -0.34
BNIP3-202ENST00000540159 OR52A5Q9H2C5 316 aa12.94□□□□□ -0.34
BNIP3-202ENST00000540159 TMEM38AQ9H6F2 299 aa12.94□□□□□ -0.34
BNIP3-202ENST00000540159 ABCB9Q9NP78 766 aa12.94□□□□□ -0.34
BNIP3-202ENST00000540159 LHX9Q9NQ69 397 aa12.94□□□□□ -0.34
BNIP3-202ENST00000540159 CNIH4Q9P003 139 aa12.94□□□□□ -0.34
BNIP3-202ENST00000540159 PLXNA2O75051 1894 aa12.94□□□□□ -0.34
BNIP3-202ENST00000540159 ALPK2Q86TB3 2170 aa12.94□□□□□ -0.34
BNIP3-202ENST00000540159 TMEM221A6NGB7 291 aa12.94□□□□□ -0.34
BNIP3-202ENST00000540159 ZAR1LA6NP61 321 aa12.94□□□□□ -0.34
BNIP3-202ENST00000540159 CCRL2O00421 344 aa12.94□□□□□ -0.34
BNIP3-202ENST00000540159 PLD2O14939 933 aa12.94□□□□□ -0.34
BNIP3-202ENST00000540159 PGRMC2O15173 223 aa12.94□□□□□ -0.34
BNIP3-202ENST00000540159 HYAL3O43820 417 aaPredicted RBP12.94□□□□□ -0.34
BNIP3-202ENST00000540159 CSO75390 466 aaKnown RBP12.94□□□□□ -0.34
BNIP3-202ENST00000540159 MFN2O95140 757 aa12.94□□□□□ -0.34
BNIP3-202ENST00000540159 MED26O95402 600 aa12.94□□□□□ -0.34
BNIP3-202ENST00000540159 H1F0P07305 194 aaKnown RBP12.94□□□□□ -0.34
BNIP3-202ENST00000540159 GSTT2P0CG29 244 aa12.94□□□□□ -0.34
BNIP3-202ENST00000540159 GSTT2BP0CG30 244 aa12.94□□□□□ -0.34
BNIP3-202ENST00000540159 P2RY2P41231 377 aa12.94□□□□□ -0.34
BNIP3-202ENST00000540159 IL12RB1P42701 662 aa12.94□□□□□ -0.34
BNIP3-202ENST00000540159 NCBP2P52298 156 aaKnown RBP eCLIP12.94□□□□□ -0.341e-7■■■■□ 26
BNIP3-202ENST00000540159 GPAT3Q53EU6 434 aa12.94□□□□□ -0.34
BNIP3-202ENST00000540159 PLAG1Q6DJT9 500 aa12.94□□□□□ -0.34
BNIP3-202ENST00000540159 FAM129CQ86XR2 697 aa12.94□□□□□ -0.34
BNIP3-202ENST00000540159 OR6T1Q8NGN1 323 aa12.94□□□□□ -0.34
BNIP3-202ENST00000540159 OR2L2Q8NH16 312 aa12.94□□□□□ -0.34
BNIP3-202ENST00000540159 GOT1L1Q8NHS2 421 aaPredicted RBP12.94□□□□□ -0.34
BNIP3-202ENST00000540159 SLC6A18Q96N87 628 aa12.94□□□□□ -0.34
BNIP3-202ENST00000540159 OPALINQ96PE5 141 aa12.94□□□□□ -0.34
BNIP3-202ENST00000540159 TSSK6Q9BXA6 273 aa12.94□□□□□ -0.34
BNIP3-202ENST00000540159 EFCAB10A6NFE3 127 aa12.93□□□□□ -0.34
BNIP3-202ENST00000540159 KMOO15229 486 aa12.93□□□□□ -0.34
BNIP3-202ENST00000540159 SNX4O95219 450 aa12.93□□□□□ -0.34
BNIP3-202ENST00000540159 PAPLNO95428 1278 aa12.93□□□□□ -0.34
BNIP3-202ENST00000540159 HBQ1P09105 142 aa12.93□□□□□ -0.34
BNIP3-202ENST00000540159 BSGP35613 385 aa12.93□□□□□ -0.34
BNIP3-202ENST00000540159 CLDN2P57739 230 aa12.93□□□□□ -0.34
BNIP3-202ENST00000540159 DUSP2Q05923 314 aa12.93□□□□□ -0.34
BNIP3-202ENST00000540159 RBBP4Q09028 425 aa12.93□□□□□ -0.34
BNIP3-202ENST00000540159 INSL4Q14641 139 aa12.93□□□□□ -0.34
BNIP3-202ENST00000540159 SF3B4Q15427 424 aaKnown RBP eCLIP12.93□□□□□ -0.341e-18■■□□□ 12.3
BNIP3-202ENST00000540159 NDUFAF5Q5TEU4 345 aa12.93□□□□□ -0.34
BNIP3-202ENST00000540159 ACSM5Q6NUN0 579 aa12.93□□□□□ -0.34
BNIP3-202ENST00000540159 PODNL1Q6PEZ8 512 aa12.93□□□□□ -0.34
BNIP3-202ENST00000540159 FAM46DQ8NEK8 389 aa12.93□□□□□ -0.34
BNIP3-202ENST00000540159 SMPDL3AQ92484 453 aa12.93□□□□□ -0.34
BNIP3-202ENST00000540159 DPH7Q9BTV6 452 aa12.93□□□□□ -0.34
BNIP3-202ENST00000540159 BARHL1Q9BZE3 327 aa12.93□□□□□ -0.34
BNIP3-202ENST00000540159 HHATLQ9HCP6 504 aa12.93□□□□□ -0.34
BNIP3-202ENST00000540159 THSD1Q9NS62 852 aa12.93□□□□□ -0.34
BNIP3-202ENST00000540159 SIRT3Q9NTG7 399 aaPredicted RBP12.93□□□□□ -0.34
BNIP3-202ENST00000540159 MUTYHQ9UIF7 546 aa12.93□□□□□ -0.34
BNIP3-202ENST00000540159 PCDHGA3Q9Y5H0 932 aa12.93□□□□□ -0.34
BNIP3-202ENST00000540159 PDZK1P1A8MUH7 402 aa12.93□□□□□ -0.34
BNIP3-202ENST00000540159 GRXCR1A8MXD5 290 aa12.93□□□□□ -0.34
BNIP3-202ENST00000540159 UGT2B17O75795 530 aa12.93□□□□□ -0.34
BNIP3-202ENST00000540159 CD79BP40259 229 aa12.93□□□□□ -0.34
BNIP3-202ENST00000540159 C21orf58P58505 322 aa12.93□□□□□ -0.34
BNIP3-202ENST00000540159 ZNF91Q05481 1191 aa12.93□□□□□ -0.34
BNIP3-202ENST00000540159 IRF3Q14653 427 aa12.93□□□□□ -0.34
BNIP3-202ENST00000540159 BCL7AQ4VC05 210 aa12.93□□□□□ -0.34
BNIP3-202ENST00000540159 NXNL2Q5VZ03 156 aa12.93□□□□□ -0.34
BNIP3-202ENST00000540159 C22orf42Q6IC83 251 aa12.93□□□□□ -0.34
BNIP3-202ENST00000540159 TMEM107Q6UX40 140 aa12.93□□□□□ -0.34
BNIP3-202ENST00000540159 SIMC1Q8NDZ2 872 aa12.93□□□□□ -0.34
BNIP3-202ENST00000540159 LRR1Q96L50 414 aa12.93□□□□□ -0.34
BNIP3-202ENST00000540159 TM9SF2Q99805 663 aa12.93□□□□□ -0.34
BNIP3-202ENST00000540159 AIF1LQ9BQI0 150 aa12.93□□□□□ -0.34
BNIP3-202ENST00000540159 PLA2G12AQ9BZM1 189 aa12.93□□□□□ -0.34
BNIP3-202ENST00000540159 C4orf51C9J302 202 aa12.92□□□□□ -0.34
BNIP3-202ENST00000540159 TIMP1P01033 207 aa12.92□□□□□ -0.34
BNIP3-202ENST00000540159 CSF2P04141 144 aa12.92□□□□□ -0.34
BNIP3-202ENST00000540159 HOXB6P17509 224 aaKnown RBP12.92□□□□□ -0.34
BNIP3-202ENST00000540159 TNFSF8P32971 234 aa12.92□□□□□ -0.34
BNIP3-202ENST00000540159 SOX6P35712 828 aa12.92□□□□□ -0.34
BNIP3-202ENST00000540159 SNRPNP63162 240 aaKnown RBP12.92□□□□□ -0.34
BNIP3-202ENST00000540159 TUBA1BP68363 451 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms