RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 SLAMF7Q9NQ25 335 aa13.22□□□□□ -0.29
SCNN1A-215ENST00000540037 KLHL42Q9P2K6 505 aa13.22□□□□□ -0.29
SCNN1A-215ENST00000540037 HCN2Q9UL51 889 aa13.22□□□□□ -0.29
SCNN1A-215ENST00000540037 NPC1O15118 1278 aa13.22□□□□□ -0.29
SCNN1A-215ENST00000540037 SEC14L5O43304 696 aa13.22□□□□□ -0.29
SCNN1A-215ENST00000540037 AVPR1BP47901 424 aa13.22□□□□□ -0.29
SCNN1A-215ENST00000540037 IL18Q14116 193 aa13.22□□□□□ -0.29
SCNN1A-215ENST00000540037 TMEM201Q5SNT2 666 aa13.22□□□□□ -0.29
SCNN1A-215ENST00000540037 TECPR1Q7Z6L1 1165 aa13.22□□□□□ -0.29
SCNN1A-215ENST00000540037 OR8J1Q8NGP2 316 aa13.22□□□□□ -0.29
SCNN1A-215ENST00000540037 TMEM19Q96HH6 336 aa13.22□□□□□ -0.29
SCNN1A-215ENST00000540037 SENP5Q96HI0 755 aaPredicted RBP13.22□□□□□ -0.29
SCNN1A-215ENST00000540037 KCTD7Q96MP8 289 aa13.22□□□□□ -0.29
SCNN1A-215ENST00000540037 MAPRE3Q9UPY8 281 aa13.22□□□□□ -0.29
SCNN1A-215ENST00000540037 ANKDD1BA6NHY2 528 aa13.21□□□□□ -0.29
SCNN1A-215ENST00000540037 H7C4K7 107 aa13.21□□□□□ -0.29
SCNN1A-215ENST00000540037 SLC16A5O15375 505 aa13.21□□□□□ -0.29
SCNN1A-215ENST00000540037 PSIP1O75475 530 aaKnown RBP13.21□□□□□ -0.29
SCNN1A-215ENST00000540037 LALBAP00709 142 aa13.21□□□□□ -0.29
SCNN1A-215ENST00000540037 CPEP16870 476 aa13.21□□□□□ -0.29
SCNN1A-215ENST00000540037 HLA-DMAP28067 261 aa13.21□□□□□ -0.29
SCNN1A-215ENST00000540037 TUFMP49411 452 aaKnown RBP13.21□□□□□ -0.29
SCNN1A-215ENST00000540037 CTBP2P56545 445 aa13.21□□□□□ -0.29
SCNN1A-215ENST00000540037 WDR5P61964 334 aaKnown RBP13.21□□□□□ -0.29
SCNN1A-215ENST00000540037 C19orf57Q0VDD7 668 aa13.21□□□□□ -0.29
SCNN1A-215ENST00000540037 WSCD2Q2TBF2 565 aa13.21□□□□□ -0.29
SCNN1A-215ENST00000540037 TRIQKQ629K1 86 aa13.21□□□□□ -0.29
SCNN1A-215ENST00000540037 TYW3Q6IPR3 259 aaKnown RBP13.21□□□□□ -0.29
SCNN1A-215ENST00000540037 CCSAPQ6IQ19 270 aaPredicted RBP13.21□□□□□ -0.29
SCNN1A-215ENST00000540037 MED27Q6P2C8 311 aa13.21□□□□□ -0.29
SCNN1A-215ENST00000540037 ZNF730Q6ZMV8 503 aa13.21□□□□□ -0.29
SCNN1A-215ENST00000540037 AMIGO1Q86WK6 493 aa13.21□□□□□ -0.29
SCNN1A-215ENST00000540037 PEX5LQ8IYB4 626 aa13.21□□□□□ -0.29
SCNN1A-215ENST00000540037 FAM109AQ8N4B1 249 aa13.21□□□□□ -0.29
SCNN1A-215ENST00000540037 CLDN22Q8N7P3 220 aa13.21□□□□□ -0.29
SCNN1A-215ENST00000540037 C19orf18Q8NEA5 215 aa13.21□□□□□ -0.29
SCNN1A-215ENST00000540037 VN1R3Q9BXE9 311 aa13.21□□□□□ -0.29
SCNN1A-215ENST00000540037 TRIM45Q9H8W5 580 aaPredicted RBP13.21□□□□□ -0.29
SCNN1A-215ENST00000540037 ANKRA2Q9H9E1 313 aa13.21□□□□□ -0.29
SCNN1A-215ENST00000540037 TAAR2Q9P1P5 351 aa13.21□□□□□ -0.29
SCNN1A-215ENST00000540037 STOML2Q9UJZ1 356 aa13.21□□□□□ -0.29
SCNN1A-215ENST00000540037 FAM240BA0A1B0GVZ2 78 aa13.21□□□□□ -0.29
SCNN1A-215ENST00000540037 WASHC1A8K0Z3 465 aa13.21□□□□□ -0.29
SCNN1A-215ENST00000540037 M0R3H8 397 aa13.21□□□□□ -0.29
SCNN1A-215ENST00000540037 RTCAO00442 366 aaKnown RBP13.21□□□□□ -0.29
SCNN1A-215ENST00000540037 SEPT4O43236 478 aa13.21□□□□□ -0.29
SCNN1A-215ENST00000540037 SLCO2B1O94956 709 aa13.21□□□□□ -0.29
SCNN1A-215ENST00000540037 IFNA14P01570 189 aa13.21□□□□□ -0.29
SCNN1A-215ENST00000540037 PTGER1P34995 402 aa13.21□□□□□ -0.29
SCNN1A-215ENST00000540037 IRS1P35568 1242 aa13.21□□□□□ -0.29
SCNN1A-215ENST00000540037 AGFG1P52594 562 aaKnown RBP13.21□□□□□ -0.29
SCNN1A-215ENST00000540037 SYTL3Q4VX76 610 aa13.21□□□□□ -0.29
SCNN1A-215ENST00000540037 REEP3Q6NUK4 255 aa13.21□□□□□ -0.29
SCNN1A-215ENST00000540037 LAPTM4BQ86VI4 370 aa13.21□□□□□ -0.29
SCNN1A-215ENST00000540037 DBF4BQ8NFT6 615 aa13.21□□□□□ -0.29
SCNN1A-215ENST00000540037 PPP1R3EQ9H7J1 279 aa13.21□□□□□ -0.29
SCNN1A-215ENST00000540037 ZNF334Q9HCZ1 680 aaPredicted RBP13.21□□□□□ -0.29
SCNN1A-215ENST00000540037 SEMA3GQ9NS98 782 aa13.21□□□□□ -0.29
SCNN1A-215ENST00000540037 COQ3Q9NZJ6 369 aa13.21□□□□□ -0.29
SCNN1A-215ENST00000540037 ENOPH1Q9UHY7 261 aa13.21□□□□□ -0.29
SCNN1A-215ENST00000540037 SF3B6Q9Y3B4 125 aaKnown RBP13.21□□□□□ -0.29
SCNN1A-215ENST00000540037 AP1M2Q9Y6Q5 423 aa13.21□□□□□ -0.29
SCNN1A-215ENST00000540037 C5orf42Q9H799 3197 aa13.21□□□□□ -0.3
SCNN1A-215ENST00000540037 A0A1B0GVC2 190 aa13.21□□□□□ -0.3
SCNN1A-215ENST00000540037 A6NIN4 97 aa13.21□□□□□ -0.3
SCNN1A-215ENST00000540037 ISM1B1AKI9 464 aa13.21□□□□□ -0.3
SCNN1A-215ENST00000540037 GTPBP1O00178 669 aaKnown RBP13.21□□□□□ -0.3
SCNN1A-215ENST00000540037 B4GALT2O60909 372 aa13.21□□□□□ -0.3
SCNN1A-215ENST00000540037 FAM157BP0CG42 384 aa13.21□□□□□ -0.3
SCNN1A-215ENST00000540037 HSD3B1P14060 373 aa13.21□□□□□ -0.3
SCNN1A-215ENST00000540037 DDX5P17844 614 aaKnown RBP13.21□□□□□ -0.3
SCNN1A-215ENST00000540037 HSD3B2P26439 372 aa13.21□□□□□ -0.3
SCNN1A-215ENST00000540037 TBPL1P62380 186 aa13.21□□□□□ -0.3
SCNN1A-215ENST00000540037 TCTN1Q2MV58 587 aa13.21□□□□□ -0.3
SCNN1A-215ENST00000540037 FAM71E1Q6IPT2 247 aa13.21□□□□□ -0.3
SCNN1A-215ENST00000540037 LHFPL3Q86UP9 236 aa13.21□□□□□ -0.3
SCNN1A-215ENST00000540037 TIGD4Q8IY51 512 aa13.21□□□□□ -0.3
SCNN1A-215ENST00000540037 ZNF480Q8WV37 535 aa13.21□□□□□ -0.3
SCNN1A-215ENST00000540037 SOCS4Q8WXH5 440 aa13.21□□□□□ -0.3
SCNN1A-215ENST00000540037 ZNF582Q96NG8 517 aaPredicted RBP13.21□□□□□ -0.3
SCNN1A-215ENST00000540037 WACQ9BTA9 647 aa13.21□□□□□ -0.3
SCNN1A-215ENST00000540037 PRR14Q9BWN1 585 aa13.21□□□□□ -0.3
SCNN1A-215ENST00000540037 PLA2G12AQ9BZM1 189 aa13.21□□□□□ -0.3
SCNN1A-215ENST00000540037 MKRN2Q9H000 416 aaKnown RBP13.21□□□□□ -0.3
SCNN1A-215ENST00000540037 NRG2O14511 850 aaPredicted RBP13.2□□□□□ -0.3
SCNN1A-215ENST00000540037 CASKO14936 926 aa13.2□□□□□ -0.3
SCNN1A-215ENST00000540037 LYRM1O43325 122 aa13.2□□□□□ -0.3
SCNN1A-215ENST00000540037 RAB36O95755 333 aa13.2□□□□□ -0.3
SCNN1A-215ENST00000540037 LGI1O95970 557 aa13.2□□□□□ -0.3
SCNN1A-215ENST00000540037 H1F0P07305 194 aaKnown RBP13.2□□□□□ -0.3
SCNN1A-215ENST00000540037 MAPK12P53778 367 aa13.2□□□□□ -0.3
SCNN1A-215ENST00000540037 TNK1Q13470 666 aa13.2□□□□□ -0.3
SCNN1A-215ENST00000540037 GINS1Q14691 196 aa13.2□□□□□ -0.3
SCNN1A-215ENST00000540037 SDE2Q6IQ49 451 aa13.2□□□□□ -0.3
SCNN1A-215ENST00000540037 SLC8B1Q6J4K2 584 aa13.2□□□□□ -0.3
SCNN1A-215ENST00000540037 Q6ZVU0 165 aa13.2□□□□□ -0.3
SCNN1A-215ENST00000540037 CMTM8Q8IZV2 173 aa13.2□□□□□ -0.3
SCNN1A-215ENST00000540037 BMPERQ8N8U9 685 aa13.2□□□□□ -0.3
SCNN1A-215ENST00000540037 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.2□□□□□ -0.3
SCNN1A-215ENST00000540037 PCNPQ8WW12 178 aaKnown RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms