RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 ANGPTL8Q6UXH0 198 aa15.93■□□□□ 0.14
COPS3-212ENST00000539941 TMEM64Q6YI46 380 aa15.93■□□□□ 0.14
COPS3-212ENST00000539941 PLXDC1Q8IUK5 500 aa15.93■□□□□ 0.14
COPS3-212ENST00000539941 SLC30A8Q8IWU4 369 aa15.93■□□□□ 0.14
COPS3-212ENST00000539941 OR4C6Q8NH72 309 aa15.93■□□□□ 0.14
COPS3-212ENST00000539941 SAP25Q8TEE9 199 aa15.93■□□□□ 0.14
COPS3-212ENST00000539941 LRTOMTQ8WZ04 291 aa15.93■□□□□ 0.14
COPS3-212ENST00000539941 PPWD1Q96BP3 646 aaKnown RBP15.93■□□□□ 0.14
COPS3-212ENST00000539941 GLIPR2Q9H4G4 154 aa15.93■□□□□ 0.14
COPS3-212ENST00000539941 TMEM38AQ9H6F2 299 aa15.93■□□□□ 0.14
COPS3-212ENST00000539941 MAGIXQ9H6Y5 334 aa15.93■□□□□ 0.14
COPS3-212ENST00000539941 PDE7BQ9NP56 450 aa15.93■□□□□ 0.14
COPS3-212ENST00000539941 SIRT3Q9NTG7 399 aaPredicted RBP15.93■□□□□ 0.14
COPS3-212ENST00000539941 GPATCH2Q9NW75 528 aa15.93■□□□□ 0.14
COPS3-212ENST00000539941 SDK1Q7Z5N4 2213 aa15.93■□□□□ 0.14
COPS3-212ENST00000539941 PTPRZ1P23471 2315 aaPredicted RBP15.93■□□□□ 0.14
COPS3-212ENST00000539941 ZNF701M0R085 212 aaPredicted RBP15.92■□□□□ 0.14
COPS3-212ENST00000539941 SERPINB7O75635 380 aa15.92■□□□□ 0.14
COPS3-212ENST00000539941 TIPRLO75663 272 aa15.92■□□□□ 0.14
COPS3-212ENST00000539941 C1QCP02747 245 aa15.92■□□□□ 0.14
COPS3-212ENST00000539941 C9P02748 559 aa15.92■□□□□ 0.14
COPS3-212ENST00000539941 RAP2AP10114 183 aa15.92■□□□□ 0.14
COPS3-212ENST00000539941 MLLT3P42568 568 aaPredicted RBP15.92■□□□□ 0.14
COPS3-212ENST00000539941 CRATP43155 626 aa15.92■□□□□ 0.14
COPS3-212ENST00000539941 GABRA4P48169 554 aa15.92■□□□□ 0.14
COPS3-212ENST00000539941 OR1D5P58170 312 aa15.92■□□□□ 0.14
COPS3-212ENST00000539941 CHRNB3Q05901 458 aa15.92■□□□□ 0.14
COPS3-212ENST00000539941 HSPB3Q12988 150 aa15.92■□□□□ 0.14
COPS3-212ENST00000539941 RUNX2Q13950 521 aa15.92■□□□□ 0.14
COPS3-212ENST00000539941 NDUFA9Q16795 377 aa15.92■□□□□ 0.14
COPS3-212ENST00000539941 DGLUCYQ7Z3D6 616 aa15.92■□□□□ 0.14
COPS3-212ENST00000539941 CLEC4FQ8N1N0 589 aa15.92■□□□□ 0.14
COPS3-212ENST00000539941 ARHGEF39Q8N4T4 335 aa15.92■□□□□ 0.14
COPS3-212ENST00000539941 SFXN5Q8TD22 340 aa15.92■□□□□ 0.14
COPS3-212ENST00000539941 NETO1Q8TDF5 533 aa15.92■□□□□ 0.14
COPS3-212ENST00000539941 UCN3Q969E3 161 aa15.92■□□□□ 0.14
COPS3-212ENST00000539941 CAPN10Q9HC96 672 aa15.92■□□□□ 0.14
COPS3-212ENST00000539941 PALMDQ9NP74 551 aa15.92■□□□□ 0.14
COPS3-212ENST00000539941 AGPAT4Q9NRZ5 378 aa15.92■□□□□ 0.14
COPS3-212ENST00000539941 SEMA3GQ9NS98 782 aa15.92■□□□□ 0.14
COPS3-212ENST00000539941 DDX18Q9NVP1 670 aaKnown RBP15.92■□□□□ 0.14
COPS3-212ENST00000539941 UBAP1Q9NZ09 502 aa15.92■□□□□ 0.14
COPS3-212ENST00000539941 SEMA5BQ9P283 1151 aa15.92■□□□□ 0.14
COPS3-212ENST00000539941 SAMD4AQ9UPU9 718 aaKnown RBP15.92■□□□□ 0.14
COPS3-212ENST00000539941 MRPS2Q9Y399 296 aaKnown RBP15.92■□□□□ 0.14
COPS3-212ENST00000539941 SNX8Q9Y5X2 465 aa15.92■□□□□ 0.14
COPS3-212ENST00000539941 ZNF780BQ9Y6R6 833 aa15.92■□□□□ 0.14
COPS3-212ENST00000539941 GLOD5A6NK44 160 aa15.92■□□□□ 0.14
COPS3-212ENST00000539941 ERAL1O75616 437 aaKnown RBP15.92■□□□□ 0.14
COPS3-212ENST00000539941 PGM3O95394 542 aa15.92■□□□□ 0.14
COPS3-212ENST00000539941 CFIP05156 583 aa15.92■□□□□ 0.14
COPS3-212ENST00000539941 MPIP34949 423 aa15.92■□□□□ 0.14
COPS3-212ENST00000539941 NCBP2P52298 156 aaKnown RBP eCLIP15.92■□□□□ 0.14
COPS3-212ENST00000539941 MN1Q10571 1320 aaPredicted RBP15.92■□□□□ 0.14
COPS3-212ENST00000539941 INAQ16352 499 aa15.92■□□□□ 0.14
COPS3-212ENST00000539941 GRAMD1BQ3KR37 738 aa15.92■□□□□ 0.14
COPS3-212ENST00000539941 SPDYE7PQ495Y7 208 aa15.92■□□□□ 0.14
COPS3-212ENST00000539941 TCTE1Q5JU00 501 aa15.92■□□□□ 0.14
COPS3-212ENST00000539941 GARNL3Q5VVW2 1013 aa15.92■□□□□ 0.14
COPS3-212ENST00000539941 LPCAT4Q643R3 524 aa15.92■□□□□ 0.14
COPS3-212ENST00000539941 FAM180BQ6P0A1 224 aa15.92■□□□□ 0.14
COPS3-212ENST00000539941 TMEM53Q6P2H8 277 aa15.92■□□□□ 0.14
COPS3-212ENST00000539941 RNF130Q86XS8 419 aa15.92■□□□□ 0.14
COPS3-212ENST00000539941 ZBTB44Q8NCP5 570 aa15.92■□□□□ 0.14
COPS3-212ENST00000539941 OR5AK3PQ8NH89 298 aa15.92■□□□□ 0.14
COPS3-212ENST00000539941 MOAP1Q96BY2 351 aa15.92■□□□□ 0.14
COPS3-212ENST00000539941 CNRIP1Q96F85 164 aaPredicted RBP15.92■□□□□ 0.14
COPS3-212ENST00000539941 C10orf90Q96M02 699 aa15.92■□□□□ 0.14
COPS3-212ENST00000539941 ANKHQ9HCJ1 492 aa15.92■□□□□ 0.14
COPS3-212ENST00000539941 ENAMQ9NRM1 1142 aa15.92■□□□□ 0.14
COPS3-212ENST00000539941 INIPQ9NRY2 104 aa15.92■□□□□ 0.14
COPS3-212ENST00000539941 SOHLH2Q9NX45 425 aa15.92■□□□□ 0.14
COPS3-212ENST00000539941 RPS6KA6Q9UK32 745 aa15.92■□□□□ 0.14
COPS3-212ENST00000539941 ACSL6Q9UKU0 697 aa15.92■□□□□ 0.14
COPS3-212ENST00000539941 CNOT11Q9UKZ1 510 aaKnown RBP15.92■□□□□ 0.14
COPS3-212ENST00000539941 R4GN57 208 aa15.92■□□□□ 0.14
COPS3-212ENST00000539941 CABIN1Q9Y6J0 2220 aa15.91■□□□□ 0.14
COPS3-212ENST00000539941 FRYLO94915 3013 aa15.91■□□□□ 0.14
COPS3-212ENST00000539941 IGHV5-51A0A0C4DH38 117 aa15.91■□□□□ 0.14
COPS3-212ENST00000539941 HCRTR1O43613 425 aa15.91■□□□□ 0.14
COPS3-212ENST00000539941 PRKRAO75569 313 aaKnown RBP15.91■□□□□ 0.14
COPS3-212ENST00000539941 KDELR2P33947 212 aa15.91■□□□□ 0.14
COPS3-212ENST00000539941 CCT3P49368 545 aaKnown RBP15.91■□□□□ 0.14
COPS3-212ENST00000539941 CCT8P50990 548 aa15.91■□□□□ 0.14
COPS3-212ENST00000539941 SNRPNP63162 240 aaKnown RBP15.91■□□□□ 0.14
COPS3-212ENST00000539941 NR0B2Q15466 257 aa15.91■□□□□ 0.14
COPS3-212ENST00000539941 ZNF630Q2M218 657 aaPredicted RBP15.91■□□□□ 0.14
COPS3-212ENST00000539941 DEFB110Q30KQ9 67 aa15.91■□□□□ 0.14
COPS3-212ENST00000539941 COX20Q5RI15 118 aa15.91■□□□□ 0.14
COPS3-212ENST00000539941 INTS11Q5TA45 600 aaKnown RBP15.91■□□□□ 0.14
COPS3-212ENST00000539941 NKAIN2Q5VXU1 208 aa15.91■□□□□ 0.14
COPS3-212ENST00000539941 BHLHB9Q6PI77 547 aa15.91■□□□□ 0.14
COPS3-212ENST00000539941 WDR74Q6RFH5 385 aaPredicted RBP15.91■□□□□ 0.14
COPS3-212ENST00000539941 FKBP9P1Q75LS8 142 aa15.91■□□□□ 0.14
COPS3-212ENST00000539941 ANKFN1Q8N957 763 aa15.91■□□□□ 0.14
COPS3-212ENST00000539941 FAM181AQ8N9Y4 354 aa15.91■□□□□ 0.14
COPS3-212ENST00000539941 CENPNQ96H22 339 aaPredicted RBP15.91■□□□□ 0.14
COPS3-212ENST00000539941 RNF145Q96MT1 663 aa15.91■□□□□ 0.14
COPS3-212ENST00000539941 ZNF681Q96N22 645 aa15.91■□□□□ 0.14
COPS3-212ENST00000539941 SEPHS2Q99611 448 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms