RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 FCGR1BQ92637 280 aa13.32□□□□□ -0.28
UBE3B-210ENST00000539599 NEURL3Q96EH8 262 aa13.32□□□□□ -0.28
UBE3B-210ENST00000539599 C16orf58Q96GQ5 468 aa13.32□□□□□ -0.28
UBE3B-210ENST00000539599 FCRL4Q96PJ5 515 aa13.32□□□□□ -0.28
UBE3B-210ENST00000539599 SDHCQ99643 169 aaPredicted RBP13.32□□□□□ -0.28
UBE3B-210ENST00000539599 MENTQ9BUN1 341 aa13.32□□□□□ -0.28
UBE3B-210ENST00000539599 NTNG1Q9Y2I2 539 aa13.32□□□□□ -0.28
UBE3B-210ENST00000539599 PGRMC2O15173 223 aa13.32□□□□□ -0.28
UBE3B-210ENST00000539599 TLX2O43763 284 aaPredicted RBP13.32□□□□□ -0.28
UBE3B-210ENST00000539599 PAK4O96013 591 aaPredicted RBP13.32□□□□□ -0.28
UBE3B-210ENST00000539599 SRPRAP08240 638 aaKnown RBP13.32□□□□□ -0.28
UBE3B-210ENST00000539599 HBQ1P09105 142 aa13.32□□□□□ -0.28
UBE3B-210ENST00000539599 SERPINB1P30740 379 aa13.32□□□□□ -0.28
UBE3B-210ENST00000539599 GPC1P35052 558 aa13.32□□□□□ -0.28
UBE3B-210ENST00000539599 PXNP49023 591 aaPredicted RBP13.32□□□□□ -0.28
UBE3B-210ENST00000539599 HMGA2P52926 109 aa13.32□□□□□ -0.28
UBE3B-210ENST00000539599 WSCD2Q2TBF2 565 aa13.32□□□□□ -0.28
UBE3B-210ENST00000539599 DCST1Q5T197 706 aa13.32□□□□□ -0.28
UBE3B-210ENST00000539599 LIPKQ5VXJ0 399 aa13.32□□□□□ -0.28
UBE3B-210ENST00000539599 PGBD2Q6P3X8 592 aa13.32□□□□□ -0.28
UBE3B-210ENST00000539599 ERN2Q76MJ5 926 aaKnown RBP13.32□□□□□ -0.28
UBE3B-210ENST00000539599 KRT78Q8N1N4 520 aa13.32□□□□□ -0.28
UBE3B-210ENST00000539599 OR8K5Q8NH50 307 aa13.32□□□□□ -0.28
UBE3B-210ENST00000539599 SMPDL3AQ92484 453 aa13.32□□□□□ -0.28
UBE3B-210ENST00000539599 DPH7Q9BTV6 452 aa13.32□□□□□ -0.28
UBE3B-210ENST00000539599 PLA2G12AQ9BZM1 189 aa13.32□□□□□ -0.28
UBE3B-210ENST00000539599 UCK2Q9BZX2 261 aa13.32□□□□□ -0.28
UBE3B-210ENST00000539599 SLC6A17Q9H1V8 727 aa13.32□□□□□ -0.28
UBE3B-210ENST00000539599 GLIPR2Q9H4G4 154 aa13.32□□□□□ -0.28
UBE3B-210ENST00000539599 FZD3Q9NPG1 666 aa13.32□□□□□ -0.28
UBE3B-210ENST00000539599 DYRK4Q9NR20 520 aa13.32□□□□□ -0.28
UBE3B-210ENST00000539599 SNTG1Q9NSN8 517 aa13.32□□□□□ -0.28
UBE3B-210ENST00000539599 CLN6Q9NWW5 311 aa13.32□□□□□ -0.28
UBE3B-210ENST00000539599 SPATA7Q9P0W8 599 aa13.32□□□□□ -0.28
UBE3B-210ENST00000539599 DEC1Q9P2X7 70 aa13.32□□□□□ -0.28
UBE3B-210ENST00000539599 IL20RAQ9UHF4 553 aa13.32□□□□□ -0.28
UBE3B-210ENST00000539599 INSL6Q9Y581 213 aa13.32□□□□□ -0.28
UBE3B-210ENST00000539599 F5P12259 2224 aa13.31□□□□□ -0.28
UBE3B-210ENST00000539599 CXorf51AA0A1B0GTR3 108 aa13.31□□□□□ -0.28
UBE3B-210ENST00000539599 CLEC2LP0C7M8 214 aa13.31□□□□□ -0.28
UBE3B-210ENST00000539599 UGT2B10P36537 528 aa13.31□□□□□ -0.28
UBE3B-210ENST00000539599 CD79BP40259 229 aa13.31□□□□□ -0.28
UBE3B-210ENST00000539599 XKP51811 444 aa13.31□□□□□ -0.28
UBE3B-210ENST00000539599 LIMK1P53667 647 aa13.31□□□□□ -0.28
UBE3B-210ENST00000539599 RAB15P59190 212 aa13.31□□□□□ -0.28
UBE3B-210ENST00000539599 LASP1Q14847 261 aaKnown RBP13.31□□□□□ -0.28
UBE3B-210ENST00000539599 MLF2Q15773 248 aaPredicted RBP13.31□□□□□ -0.28
UBE3B-210ENST00000539599 PLAG1Q6DJT9 500 aa13.31□□□□□ -0.28
UBE3B-210ENST00000539599 LCTLQ6UWM7 567 aa13.31□□□□□ -0.28
UBE3B-210ENST00000539599 DCUN1D3Q8IWE4 304 aa13.31□□□□□ -0.28
UBE3B-210ENST00000539599 AMER2Q8N7J2 671 aa13.31□□□□□ -0.28
UBE3B-210ENST00000539599 SIMC1Q8NDZ2 872 aa13.31□□□□□ -0.28
UBE3B-210ENST00000539599 OR6T1Q8NGN1 323 aa13.31□□□□□ -0.28
UBE3B-210ENST00000539599 TMEM245Q9H330 911 aa13.31□□□□□ -0.28
UBE3B-210ENST00000539599 SIAEQ9HAT2 523 aa13.31□□□□□ -0.28
UBE3B-210ENST00000539599 KCND3Q9UK17 655 aa13.31□□□□□ -0.28
UBE3B-210ENST00000539599 IRAK3Q9Y616 596 aa13.31□□□□□ -0.28
UBE3B-210ENST00000539599 GRXCR1A8MXD5 290 aa13.31□□□□□ -0.28
UBE3B-210ENST00000539599 KIAA0355O15063 1070 aa13.31□□□□□ -0.28
UBE3B-210ENST00000539599 KMOO15229 486 aa13.31□□□□□ -0.28
UBE3B-210ENST00000539599 MID1O15344 667 aa13.31□□□□□ -0.28
UBE3B-210ENST00000539599 NDUFS4O43181 175 aa13.31□□□□□ -0.28
UBE3B-210ENST00000539599 KELP23276 732 aa13.31□□□□□ -0.28
UBE3B-210ENST00000539599 S100A5P33763 92 aa13.31□□□□□ -0.28
UBE3B-210ENST00000539599 HTRA4P83105 476 aaPredicted RBP13.31□□□□□ -0.28
UBE3B-210ENST00000539599 CDK3Q00526 305 aa13.31□□□□□ -0.28
UBE3B-210ENST00000539599 ELAVL3Q14576 367 aaKnown RBP13.31□□□□□ -0.28
UBE3B-210ENST00000539599 FLYWCH1Q4VC44 716 aa13.31□□□□□ -0.28
UBE3B-210ENST00000539599 MLIPQ5VWP3 458 aa13.31□□□□□ -0.28
UBE3B-210ENST00000539599 ACSM5Q6NUN0 579 aa13.31□□□□□ -0.28
UBE3B-210ENST00000539599 PODNL1Q6PEZ8 512 aa13.31□□□□□ -0.28
UBE3B-210ENST00000539599 GDPD3Q7L5L3 318 aa13.31□□□□□ -0.28
UBE3B-210ENST00000539599 IQCHQ86VS3 1027 aa13.31□□□□□ -0.28
UBE3B-210ENST00000539599 CCDC116Q8IYX3 515 aa13.31□□□□□ -0.28
UBE3B-210ENST00000539599 ZFP41Q8N8Y5 198 aa13.31□□□□□ -0.28
UBE3B-210ENST00000539599 ABHD8Q96I13 439 aa13.31□□□□□ -0.28
UBE3B-210ENST00000539599 LRIG1Q96JA1 1093 aa13.31□□□□□ -0.28
UBE3B-210ENST00000539599 C12orf66Q96MD2 445 aa13.31□□□□□ -0.28
UBE3B-210ENST00000539599 FERD3LQ96RJ6 166 aa13.31□□□□□ -0.28
UBE3B-210ENST00000539599 NUAK2Q9H093 628 aa13.31□□□□□ -0.28
UBE3B-210ENST00000539599 POLR2J3Q9H1A7 115 aaKnown RBP13.31□□□□□ -0.28
UBE3B-210ENST00000539599 DPEP2Q9H4A9 486 aa13.31□□□□□ -0.28
UBE3B-210ENST00000539599 EPHX3Q9H6B9 360 aa13.31□□□□□ -0.28
UBE3B-210ENST00000539599 C6orf106Q9H6K1 298 aaPredicted RBP13.31□□□□□ -0.28
UBE3B-210ENST00000539599 EGLN3Q9H6Z9 239 aa13.31□□□□□ -0.28
UBE3B-210ENST00000539599 ZCCHC3Q9NUD5 404 aaKnown RBP13.31□□□□□ -0.28
UBE3B-210ENST00000539599 FBXW2Q9UKT8 454 aa13.31□□□□□ -0.28
UBE3B-210ENST00000539599 TMCC3Q9ULS5 477 aa13.31□□□□□ -0.28
UBE3B-210ENST00000539599 A8MV72 311 aaPredicted RBP13.3□□□□□ -0.28
UBE3B-210ENST00000539599 PSMD11O00231 422 aa13.3□□□□□ -0.28
UBE3B-210ENST00000539599 CAPN5O15484 640 aaPredicted RBP13.3□□□□□ -0.28
UBE3B-210ENST00000539599 TP53P04637 393 aaPredicted RBP13.3□□□□□ -0.28
UBE3B-210ENST00000539599 H1F0P07305 194 aaKnown RBP13.3□□□□□ -0.28
UBE3B-210ENST00000539599 DDX6P26196 483 aaKnown RBP eCLIP13.3□□□□□ -0.28
UBE3B-210ENST00000539599 BMPR1AP36894 532 aa13.3□□□□□ -0.28
UBE3B-210ENST00000539599 BUD31P41223 144 aaPredicted RBP13.3□□□□□ -0.28
UBE3B-210ENST00000539599 PCBP4P57723 403 aaKnown RBP13.3□□□□□ -0.28
UBE3B-210ENST00000539599 RAB8AP61006 207 aa13.3□□□□□ -0.28
UBE3B-210ENST00000539599 ZNF91Q05481 1191 aa13.3□□□□□ -0.28
UBE3B-210ENST00000539599 FUT5Q11128 374 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms