RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 SLC22A1O15245 554 aa16.18■□□□□ 0.18
PCDHB17P-201ENST00000539533 PRAMEF10O60809 474 aa16.18■□□□□ 0.18
PCDHB17P-201ENST00000539533 CREG1O75629 220 aa16.18■□□□□ 0.18
PCDHB17P-201ENST00000539533 LSSP48449 732 aa16.18■□□□□ 0.18
PCDHB17P-201ENST00000539533 IL5RAQ01344 420 aa16.18■□□□□ 0.18
PCDHB17P-201ENST00000539533 ELOCQ15369 112 aa16.18■□□□□ 0.18
PCDHB17P-201ENST00000539533 RFX4Q33E94 735 aa16.18■□□□□ 0.18
PCDHB17P-201ENST00000539533 ANXA8L1Q5VT79 327 aa16.18■□□□□ 0.18
PCDHB17P-201ENST00000539533 ZNF438Q7Z4V0 828 aa16.18■□□□□ 0.18
PCDHB17P-201ENST00000539533 SNX29P2Q8IUI4 249 aa16.18■□□□□ 0.18
PCDHB17P-201ENST00000539533 TBC1D19Q8N5T2 526 aa16.18■□□□□ 0.18
PCDHB17P-201ENST00000539533 NDNFQ8TB73 568 aa16.18■□□□□ 0.18
PCDHB17P-201ENST00000539533 SLC6A16Q9GZN6 736 aa16.18■□□□□ 0.18
PCDHB17P-201ENST00000539533 DDX31Q9H8H2 851 aaKnown RBP16.18■□□□□ 0.18
PCDHB17P-201ENST00000539533 RNASET2O00584 256 aaKnown RBP16.18■□□□□ 0.18
PCDHB17P-201ENST00000539533 ERI3O43414 337 aaKnown RBP16.18■□□□□ 0.18
PCDHB17P-201ENST00000539533 ABCB1P08183 1280 aaPredicted RBP16.18■□□□□ 0.18
PCDHB17P-201ENST00000539533 ENGP17813 658 aa16.18■□□□□ 0.18
PCDHB17P-201ENST00000539533 PCYT1AP49585 367 aa16.18■□□□□ 0.18
PCDHB17P-201ENST00000539533 GZMMP51124 257 aa16.18■□□□□ 0.18
PCDHB17P-201ENST00000539533 MAZP56270 477 aaKnown RBP16.18■□□□□ 0.18
PCDHB17P-201ENST00000539533 PPP1CAP62136 330 aa16.18■□□□□ 0.18
PCDHB17P-201ENST00000539533 IFITM3Q01628 133 aa16.18■□□□□ 0.18
PCDHB17P-201ENST00000539533 RAPSNQ13702 412 aa16.18■□□□□ 0.18
PCDHB17P-201ENST00000539533 ADPRMQ3LIE5 342 aa16.18■□□□□ 0.18
PCDHB17P-201ENST00000539533 ZC3H12BQ5HYM0 836 aaKnown RBP16.18■□□□□ 0.18
PCDHB17P-201ENST00000539533 FCRL6Q6DN72 434 aa16.18■□□□□ 0.18
PCDHB17P-201ENST00000539533 IKBIPQ70UQ0 350 aa16.18■□□□□ 0.18
PCDHB17P-201ENST00000539533 DGLUCYQ7Z3D6 616 aa16.18■□□□□ 0.18
PCDHB17P-201ENST00000539533 VN1R4Q7Z5H5 301 aa16.18■□□□□ 0.18
PCDHB17P-201ENST00000539533 HIPK1Q86Z02 1210 aa16.18■□□□□ 0.18
PCDHB17P-201ENST00000539533 MINDY2Q8NBR6 621 aa16.18■□□□□ 0.18
PCDHB17P-201ENST00000539533 RORBQ92753 470 aa16.18■□□□□ 0.18
PCDHB17P-201ENST00000539533 MIEF1Q9NQG6 463 aa16.18■□□□□ 0.18
PCDHB17P-201ENST00000539533 EVA1BQ9NVM1 165 aa16.18■□□□□ 0.18
PCDHB17P-201ENST00000539533 OR2A25A4D2G3 310 aa16.17■□□□□ 0.18
PCDHB17P-201ENST00000539533 M0QX08 132 aa16.17■□□□□ 0.18
PCDHB17P-201ENST00000539533 M0R3G1 203 aa16.17■□□□□ 0.18
PCDHB17P-201ENST00000539533 CTSVO60911 334 aa16.17■□□□□ 0.18
PCDHB17P-201ENST00000539533 ANGPTL1O95841 491 aa16.17■□□□□ 0.18
PCDHB17P-201ENST00000539533 SERPINA1P01009 418 aa16.17■□□□□ 0.18
PCDHB17P-201ENST00000539533 ITGAMP11215 1152 aa16.17■□□□□ 0.18
PCDHB17P-201ENST00000539533 PVRP15151 417 aa16.17■□□□□ 0.18
PCDHB17P-201ENST00000539533 TYRP1P17643 537 aa16.17■□□□□ 0.18
PCDHB17P-201ENST00000539533 SSR2P43308 183 aa16.17■□□□□ 0.18
PCDHB17P-201ENST00000539533 GSSP48637 474 aa16.17■□□□□ 0.18
PCDHB17P-201ENST00000539533 HNRNPFP52597 415 aaKnown RBP16.17■□□□□ 0.18
PCDHB17P-201ENST00000539533 NXPH1P58417 271 aa16.17■□□□□ 0.18
PCDHB17P-201ENST00000539533 HBA1P69905 142 aa16.17■□□□□ 0.18
PCDHB17P-201ENST00000539533 ZXDAP98168 799 aa16.17■□□□□ 0.18
PCDHB17P-201ENST00000539533 VAC14Q08AM6 782 aa16.17■□□□□ 0.18
PCDHB17P-201ENST00000539533 TOR1AIP1Q5JTV8 583 aa16.17■□□□□ 0.18
PCDHB17P-201ENST00000539533 FIGLAQ6QHK4 219 aa16.17■□□□□ 0.18
PCDHB17P-201ENST00000539533 CALHM3Q86XJ0 350 aa16.17■□□□□ 0.18
PCDHB17P-201ENST00000539533 MFSD4AQ8N468 514 aa16.17■□□□□ 0.18
PCDHB17P-201ENST00000539533 DNASE2BQ8WZ79 361 aa16.17■□□□□ 0.18
PCDHB17P-201ENST00000539533 UCN3Q969E3 161 aa16.17■□□□□ 0.18
PCDHB17P-201ENST00000539533 FAM120BQ96EK7 910 aaKnown RBP16.17■□□□□ 0.18
PCDHB17P-201ENST00000539533 QRFPRQ96P65 431 aa16.17■□□□□ 0.18
PCDHB17P-201ENST00000539533 TPK1Q9H3S4 243 aa16.17■□□□□ 0.18
PCDHB17P-201ENST00000539533 NECTIN3Q9NQS3 549 aa16.17■□□□□ 0.18
PCDHB17P-201ENST00000539533 TEX10Q9NXF1 929 aaPredicted RBP16.17■□□□□ 0.18
PCDHB17P-201ENST00000539533 C5AR2Q9P296 337 aa16.17■□□□□ 0.18
PCDHB17P-201ENST00000539533 ERVK-18Q9QC07 812 aa16.17■□□□□ 0.18
PCDHB17P-201ENST00000539533 AP3M1Q9Y2T2 418 aa16.17■□□□□ 0.18
PCDHB17P-201ENST00000539533 C2orf74A8MZ97 194 aa16.16■□□□□ 0.18
PCDHB17P-201ENST00000539533 TNFSF14O43557 240 aa16.16■□□□□ 0.18
PCDHB17P-201ENST00000539533 SDC3O75056 442 aa16.16■□□□□ 0.18
PCDHB17P-201ENST00000539533 NADKO95544 446 aaPredicted RBP16.16■□□□□ 0.18
PCDHB17P-201ENST00000539533 C6orf47O95873 294 aa16.16■□□□□ 0.18
PCDHB17P-201ENST00000539533 ALOX5P09917 674 aa16.16■□□□□ 0.18
PCDHB17P-201ENST00000539533 RCVRNP35243 200 aa16.16■□□□□ 0.18
PCDHB17P-201ENST00000539533 RPL3P39023 403 aaKnown RBP16.16■□□□□ 0.18
PCDHB17P-201ENST00000539533 ALDH9A1P49189 494 aa16.16■□□□□ 0.18
PCDHB17P-201ENST00000539533 RAB8AP61006 207 aa16.16■□□□□ 0.18
PCDHB17P-201ENST00000539533 GAB1Q13480 694 aa16.16■□□□□ 0.18
PCDHB17P-201ENST00000539533 COL9A2Q14055 689 aaPredicted RBP16.16■□□□□ 0.18
PCDHB17P-201ENST00000539533 TMEM35AQ53FP2 167 aa16.16■□□□□ 0.18
PCDHB17P-201ENST00000539533 KCT2Q8NC54 265 aa16.16■□□□□ 0.18
PCDHB17P-201ENST00000539533 OR4A15Q8NGL6 344 aa16.16■□□□□ 0.18
PCDHB17P-201ENST00000539533 OR8K5Q8NH50 307 aa16.16■□□□□ 0.18
PCDHB17P-201ENST00000539533 NETO1Q8TDF5 533 aa16.16■□□□□ 0.18
PCDHB17P-201ENST00000539533 RSC1A1Q92681 617 aa16.16■□□□□ 0.18
PCDHB17P-201ENST00000539533 EFHD2Q96C19 240 aaPredicted RBP16.16■□□□□ 0.18
PCDHB17P-201ENST00000539533 MTERF3Q96E29 417 aa16.16■□□□□ 0.18
PCDHB17P-201ENST00000539533 PRDM7Q9NQW5 492 aa16.16■□□□□ 0.18
PCDHB17P-201ENST00000539533 A0A0A6YYD5 115 aa16.16■□□□□ 0.18
PCDHB17P-201ENST00000539533 FAM220BPB1ANY3 271 aa16.16■□□□□ 0.18
PCDHB17P-201ENST00000539533 MITFO75030 526 aaPredicted RBP16.16■□□□□ 0.18
PCDHB17P-201ENST00000539533 EPN2O95208 641 aa16.16■□□□□ 0.18
PCDHB17P-201ENST00000539533 DDCP20711 480 aa16.16■□□□□ 0.18
PCDHB17P-201ENST00000539533 ACVR2AP27037 513 aa16.16■□□□□ 0.18
PCDHB17P-201ENST00000539533 ALDH4A1P30038 563 aa16.16■□□□□ 0.18
PCDHB17P-201ENST00000539533 MAP2K4P45985 399 aa16.16■□□□□ 0.18
PCDHB17P-201ENST00000539533 SNRPNP63162 240 aaKnown RBP16.16■□□□□ 0.18
PCDHB17P-201ENST00000539533 DGUOKQ16854 277 aa16.16■□□□□ 0.18
PCDHB17P-201ENST00000539533 AGAP7PQ5VUJ5 663 aa16.16■□□□□ 0.18
PCDHB17P-201ENST00000539533 ABHD17CQ6PCB6 329 aa16.16■□□□□ 0.18
PCDHB17P-201ENST00000539533 GALNT5Q7Z7M9 940 aa16.16■□□□□ 0.18
PCDHB17P-201ENST00000539533 TPT1P8Q9HAU6 139 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms