RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 ESRRAP11474 423 aaPredicted RBP12.14□□□□□ -0.47
CCDC42-202ENST00000539522 IDO1P14902 403 aa12.14□□□□□ -0.47
CCDC42-202ENST00000539522 DDCP20711 480 aa12.14□□□□□ -0.47
CCDC42-202ENST00000539522 CALB2P22676 271 aa12.14□□□□□ -0.47
CCDC42-202ENST00000539522 IL12AP29459 219 aa12.14□□□□□ -0.47
CCDC42-202ENST00000539522 BUD31P41223 144 aaPredicted RBP12.14□□□□□ -0.47
CCDC42-202ENST00000539522 MRPL19P49406 292 aaKnown RBP12.14□□□□□ -0.47
CCDC42-202ENST00000539522 STX1BP61266 288 aa12.14□□□□□ -0.47
CCDC42-202ENST00000539522 ERVK-8P63133 956 aa12.14□□□□□ -0.47
CCDC42-202ENST00000539522 DMTNQ08495 405 aa12.14□□□□□ -0.47
CCDC42-202ENST00000539522 C2orf80Q0P641 193 aa12.14□□□□□ -0.47
CCDC42-202ENST00000539522 SLC13A2Q13183 592 aa12.14□□□□□ -0.47
CCDC42-202ENST00000539522 DUSP8Q13202 625 aa12.14□□□□□ -0.47
CCDC42-202ENST00000539522 TBR1Q16650 682 aa12.14□□□□□ -0.47
CCDC42-202ENST00000539522 DCAF10Q5QP82 559 aa12.14□□□□□ -0.47
CCDC42-202ENST00000539522 BROXQ5VW32 411 aa12.14□□□□□ -0.47
CCDC42-202ENST00000539522 OR52E8Q6IFG1 317 aa12.14□□□□□ -0.47
CCDC42-202ENST00000539522 PSMF1Q92530 271 aa12.14□□□□□ -0.47
CCDC42-202ENST00000539522 TTC9Q92623 222 aa12.14□□□□□ -0.47
CCDC42-202ENST00000539522 NACC2Q96BF6 587 aa12.14□□□□□ -0.47
CCDC42-202ENST00000539522 NPAS2Q99743 824 aa12.14□□□□□ -0.47
CCDC42-202ENST00000539522 ZNF160Q9HCG1 818 aa12.14□□□□□ -0.47
CCDC42-202ENST00000539522 AIG1Q9NVV5 245 aa12.14□□□□□ -0.47
CCDC42-202ENST00000539522 TAGLN3Q9UI15 199 aa12.14□□□□□ -0.47
CCDC42-202ENST00000539522 PPIEQ9UNP9 301 aaKnown RBP12.14□□□□□ -0.47
CCDC42-202ENST00000539522 EIF3LQ9Y262 564 aaKnown RBP12.14□□□□□ -0.47
CCDC42-202ENST00000539522 COPG1Q9Y678 874 aaKnown RBP12.14□□□□□ -0.47
CCDC42-202ENST00000539522 CACNA1GO43497 2377 aa12.13□□□□□ -0.47
CCDC42-202ENST00000539522 GABRR3A8MPY1 467 aa12.13□□□□□ -0.47
CCDC42-202ENST00000539522 K7EM74 188 aa12.13□□□□□ -0.47
CCDC42-202ENST00000539522 AKAP10O43572 662 aa12.13□□□□□ -0.47
CCDC42-202ENST00000539522 PRKNO60260 465 aaPredicted RBP12.13□□□□□ -0.47
CCDC42-202ENST00000539522 TBX19O60806 448 aa12.13□□□□□ -0.47
CCDC42-202ENST00000539522 MYO1DO94832 1006 aa12.13□□□□□ -0.47
CCDC42-202ENST00000539522 UNC5CO95185 931 aa12.13□□□□□ -0.47
CCDC42-202ENST00000539522 IGHEP01854 428 aa12.13□□□□□ -0.47
CCDC42-202ENST00000539522 DRD2P14416 443 aa12.13□□□□□ -0.47
CCDC42-202ENST00000539522 S1PR1P21453 382 aa12.13□□□□□ -0.47
CCDC42-202ENST00000539522 STT3AP46977 705 aa12.13□□□□□ -0.47
CCDC42-202ENST00000539522 ALDH9A1P49189 494 aa12.13□□□□□ -0.47
CCDC42-202ENST00000539522 UCNP55089 124 aa12.13□□□□□ -0.47
CCDC42-202ENST00000539522 C21orf58P58505 322 aa12.13□□□□□ -0.47
CCDC42-202ENST00000539522 PHC1P78364 1004 aa12.13□□□□□ -0.47
CCDC42-202ENST00000539522 LTB4RQ15722 352 aa12.13□□□□□ -0.47
CCDC42-202ENST00000539522 PAPD4Q6PIY7 484 aaKnown RBP12.13□□□□□ -0.47
CCDC42-202ENST00000539522 IKBIPQ70UQ0 350 aa12.13□□□□□ -0.47
CCDC42-202ENST00000539522 NDUFAF7Q7L592 441 aa12.13□□□□□ -0.47
CCDC42-202ENST00000539522 RAB43Q86YS6 212 aa12.13□□□□□ -0.47
CCDC42-202ENST00000539522 TREML1Q86YW5 311 aa12.13□□□□□ -0.47
CCDC42-202ENST00000539522 TICAM1Q8IUC6 712 aa12.13□□□□□ -0.47
CCDC42-202ENST00000539522 MIER2Q8N344 545 aa12.13□□□□□ -0.47
CCDC42-202ENST00000539522 KIF2BQ8N4N8 673 aa12.13□□□□□ -0.47
CCDC42-202ENST00000539522 APCDD1LQ8NCL9 501 aa12.13□□□□□ -0.47
CCDC42-202ENST00000539522 OR7A2PQ8NGA2 310 aa12.13□□□□□ -0.47
CCDC42-202ENST00000539522 RP9Q8TA86 221 aaKnown RBP12.13□□□□□ -0.47
CCDC42-202ENST00000539522 THAP4Q8WY91 577 aa12.13□□□□□ -0.47
CCDC42-202ENST00000539522 TRIM4Q9C037 500 aa12.13□□□□□ -0.47
CCDC42-202ENST00000539522 TAS2R7Q9NYW3 318 aa12.13□□□□□ -0.47
CCDC42-202ENST00000539522 NOP53Q9NZM5 478 aaKnown RBP12.13□□□□□ -0.47
CCDC42-202ENST00000539522 ATP6V1HQ9UI12 483 aa12.13□□□□□ -0.47
CCDC42-202ENST00000539522 IGSF10Q6WRI0 2623 aa12.13□□□□□ -0.47
CCDC42-202ENST00000539522 BLACEA4D250 179 aa12.12□□□□□ -0.47
CCDC42-202ENST00000539522 SAGE2PA6NJ88 616 aa12.12□□□□□ -0.47
CCDC42-202ENST00000539522 TMEM200CA6NKL6 621 aa12.12□□□□□ -0.47
CCDC42-202ENST00000539522 MYO1GB0I1T2 1018 aa12.12□□□□□ -0.47
CCDC42-202ENST00000539522 C9JVG2 144 aa12.12□□□□□ -0.47
CCDC42-202ENST00000539522 CLDN4O14493 209 aa12.12□□□□□ -0.47
CCDC42-202ENST00000539522 MAN1A2O60476 641 aa12.12□□□□□ -0.47
CCDC42-202ENST00000539522 CEACAM4O75871 244 aa12.12□□□□□ -0.47
CCDC42-202ENST00000539522 CBX6O95503 412 aa12.12□□□□□ -0.47
CCDC42-202ENST00000539522 HPP00738 406 aa12.12□□□□□ -0.47
CCDC42-202ENST00000539522 IGKV3-11P04433 115 aa12.12□□□□□ -0.47
CCDC42-202ENST00000539522 CPMP14384 443 aa12.12□□□□□ -0.47
CCDC42-202ENST00000539522 GPX3P22352 226 aa12.12□□□□□ -0.47
CCDC42-202ENST00000539522 PIK3R1P27986 724 aa12.12□□□□□ -0.47
CCDC42-202ENST00000539522 MAPK1P28482 360 aa12.12□□□□□ -0.47
CCDC42-202ENST00000539522 FEN1P39748 380 aaKnown RBP12.12□□□□□ -0.47
CCDC42-202ENST00000539522 FRKP42685 505 aaPredicted RBP12.12□□□□□ -0.47
CCDC42-202ENST00000539522 GSTM5P46439 218 aa12.12□□□□□ -0.47
CCDC42-202ENST00000539522 XKP51811 444 aa12.12□□□□□ -0.47
CCDC42-202ENST00000539522 WNT3P56703 355 aa12.12□□□□□ -0.47
CCDC42-202ENST00000539522 CLDN8P56748 225 aa12.12□□□□□ -0.47
CCDC42-202ENST00000539522 OR4D2P58180 307 aa12.12□□□□□ -0.47
CCDC42-202ENST00000539522 SLC26A5P58743 744 aa12.12□□□□□ -0.47
CCDC42-202ENST00000539522 UFM1P61960 85 aa12.12□□□□□ -0.47
CCDC42-202ENST00000539522 CYLC2Q14093 348 aaPredicted RBP12.12□□□□□ -0.47
CCDC42-202ENST00000539522 MAPRE2Q15555 327 aa12.12□□□□□ -0.47
CCDC42-202ENST00000539522 PDCD4Q53EL6 469 aaKnown RBP12.12□□□□□ -0.47
CCDC42-202ENST00000539522 APLFQ8IW19 511 aaPredicted RBP12.12□□□□□ -0.47
CCDC42-202ENST00000539522 FAM9CQ8IZT9 166 aa12.12□□□□□ -0.47
CCDC42-202ENST00000539522 TMEM132CQ8N3T6 1108 aa12.12□□□□□ -0.47
CCDC42-202ENST00000539522 OR4K14Q8NGD5 310 aa12.12□□□□□ -0.47
CCDC42-202ENST00000539522 CDC26Q8NHZ8 85 aa12.12□□□□□ -0.47
CCDC42-202ENST00000539522 ZNF721Q8TF20 911 aa12.12□□□□□ -0.47
CCDC42-202ENST00000539522 EXTL1Q92935 676 aa12.12□□□□□ -0.47
CCDC42-202ENST00000539522 CIDECQ96AQ7 238 aaPredicted RBP12.12□□□□□ -0.47
CCDC42-202ENST00000539522 EXOSC8Q96B26 276 aaKnown RBP12.12□□□□□ -0.47
CCDC42-202ENST00000539522 ZNF764Q96H86 408 aaPredicted RBP12.12□□□□□ -0.47
CCDC42-202ENST00000539522 BRINP2Q9C0B6 783 aa12.12□□□□□ -0.47
CCDC42-202ENST00000539522 REEP4Q9H6H4 257 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms