RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 LYPD8Q6UX82 237 aa12.73□□□□□ -0.37
CD9-208ENST00000538834 MMP21Q8N119 569 aa12.73□□□□□ -0.37
CD9-208ENST00000538834 ZNF615Q8N8J6 731 aa12.73□□□□□ -0.37
CD9-208ENST00000538834 ZNF441Q8N8Z8 693 aa12.73□□□□□ -0.37
CD9-208ENST00000538834 OR2T11Q8NH01 316 aa12.73□□□□□ -0.37
CD9-208ENST00000538834 NUBPLQ8TB37 319 aa12.73□□□□□ -0.37
CD9-208ENST00000538834 FAR1Q8WVX9 515 aa12.73□□□□□ -0.37
CD9-208ENST00000538834 PPWD1Q96BP3 646 aaKnown RBP12.73□□□□□ -0.37
CD9-208ENST00000538834 TLCD1Q96CP7 247 aa12.73□□□□□ -0.37
CD9-208ENST00000538834 NTNG2Q96CW9 530 aa12.73□□□□□ -0.37
CD9-208ENST00000538834 CNRIP1Q96F85 164 aaPredicted RBP12.73□□□□□ -0.37
CD9-208ENST00000538834 RBM18Q96H35 190 aaKnown RBP12.73□□□□□ -0.37
CD9-208ENST00000538834 WDR41Q9HAD4 459 aa12.73□□□□□ -0.37
CD9-208ENST00000538834 HAO1Q9UJM8 370 aa12.73□□□□□ -0.37
CD9-208ENST00000538834 WBP11Q9Y2W2 641 aaKnown RBP12.73□□□□□ -0.37
CD9-208ENST00000538834 YARS2Q9Y2Z4 477 aaKnown RBP12.73□□□□□ -0.37
CD9-208ENST00000538834 COPG1Q9Y678 874 aaKnown RBP12.73□□□□□ -0.37
CD9-208ENST00000538834 ICE1Q9Y2F5 2266 aa12.73□□□□□ -0.37
CD9-208ENST00000538834 USP9YO00507 2555 aaPredicted RBP12.73□□□□□ -0.37
CD9-208ENST00000538834 TCP11X1B4DZS4 312 aa12.72□□□□□ -0.37
CD9-208ENST00000538834 NADKO95544 446 aaPredicted RBP12.72□□□□□ -0.37
CD9-208ENST00000538834 IFNA16P05015 189 aa12.72□□□□□ -0.37
CD9-208ENST00000538834 CT62P0C5K7 136 aa12.72□□□□□ -0.37
CD9-208ENST00000538834 CPMP14384 443 aa12.72□□□□□ -0.37
CD9-208ENST00000538834 SERPINB4P48594 390 aa12.72□□□□□ -0.37
CD9-208ENST00000538834 PLIN5Q00G26 463 aa12.72□□□□□ -0.37
CD9-208ENST00000538834 PRSS53Q2L4Q9 553 aa12.72□□□□□ -0.37
CD9-208ENST00000538834 PRICKLE4Q2TBC4 344 aa12.72□□□□□ -0.37
CD9-208ENST00000538834 XKR7Q5GH72 579 aa12.72□□□□□ -0.37
CD9-208ENST00000538834 CLEC6AQ6EIG7 209 aa12.72□□□□□ -0.37
CD9-208ENST00000538834 FAM71E1Q6IPT2 247 aa12.72□□□□□ -0.37
CD9-208ENST00000538834 SCIMPQ6UWF3 145 aa12.72□□□□□ -0.37
CD9-208ENST00000538834 HSDL2Q6YN16 418 aa12.72□□□□□ -0.37
CD9-208ENST00000538834 C9orf40Q8IXQ3 194 aa12.72□□□□□ -0.37
CD9-208ENST00000538834 CLYBLQ8N0X4 340 aa12.72□□□□□ -0.37
CD9-208ENST00000538834 CCDC63Q8NA47 563 aa12.72□□□□□ -0.37
CD9-208ENST00000538834 OR4K14Q8NGD5 310 aa12.72□□□□□ -0.37
CD9-208ENST00000538834 GRHL3Q8TE85 626 aa12.72□□□□□ -0.37
CD9-208ENST00000538834 C16orf78Q8WTQ4 265 aa12.72□□□□□ -0.37
CD9-208ENST00000538834 ZNF764Q96H86 408 aaPredicted RBP12.72□□□□□ -0.37
CD9-208ENST00000538834 DGAT2Q96PD7 388 aa12.72□□□□□ -0.37
CD9-208ENST00000538834 UTP23Q9BRU9 249 aaKnown RBP12.72□□□□□ -0.37
CD9-208ENST00000538834 IQCGQ9H095 443 aaKnown RBP12.72□□□□□ -0.37
CD9-208ENST00000538834 EHD3Q9NZN3 535 aa12.72□□□□□ -0.37
CD9-208ENST00000538834 ABI3Q9P2A4 366 aa12.72□□□□□ -0.37
CD9-208ENST00000538834 MAP10Q9P2G4 905 aa12.72□□□□□ -0.37
CD9-208ENST00000538834 SPTBN1Q01082 2364 aaKnown RBP12.72□□□□□ -0.37
CD9-208ENST00000538834 PHF3Q92576 2039 aaKnown RBP12.71□□□□□ -0.37
CD9-208ENST00000538834 PCDH7O60245 1069 aa12.71□□□□□ -0.37
CD9-208ENST00000538834 ITGA10O75578 1167 aa12.71□□□□□ -0.37
CD9-208ENST00000538834 F10P00742 488 aa12.71□□□□□ -0.37
CD9-208ENST00000538834 SP1P08047 785 aa12.71□□□□□ -0.37
CD9-208ENST00000538834 PORP16435 677 aaPredicted RBP12.71□□□□□ -0.37
CD9-208ENST00000538834 PIK3R1P27986 724 aa12.71□□□□□ -0.37
CD9-208ENST00000538834 XKP51811 444 aa12.71□□□□□ -0.37
CD9-208ENST00000538834 ACSM2AQ08AH3 577 aa12.71□□□□□ -0.37
CD9-208ENST00000538834 OR1C1Q15619 314 aa12.71□□□□□ -0.37
CD9-208ENST00000538834 ZNF750Q32MQ0 723 aa12.71□□□□□ -0.37
CD9-208ENST00000538834 PIGGQ5H8A4 983 aa12.71□□□□□ -0.37
CD9-208ENST00000538834 ZNF766Q5HY98 468 aa12.71□□□□□ -0.37
CD9-208ENST00000538834 ACSM2BQ68CK6 577 aa12.71□□□□□ -0.37
CD9-208ENST00000538834 SPINK14Q6IE38 97 aa12.71□□□□□ -0.37
CD9-208ENST00000538834 C16orf47Q6ZP98 133 aaPredicted RBP12.71□□□□□ -0.37
CD9-208ENST00000538834 ZCCHC23Q6ZST2 131 aa12.71□□□□□ -0.37
CD9-208ENST00000538834 DNAJB8Q8NHS0 232 aa12.71□□□□□ -0.37
CD9-208ENST00000538834 ART5Q96L15 291 aa12.71□□□□□ -0.37
CD9-208ENST00000538834 RASL10BQ96S79 203 aa12.71□□□□□ -0.37
CD9-208ENST00000538834 HES7Q9BYE0 225 aa12.71□□□□□ -0.37
CD9-208ENST00000538834 SHCBP1LQ9BZQ2 653 aa12.71□□□□□ -0.37
CD9-208ENST00000538834 OR8D2Q9GZM6 311 aa12.71□□□□□ -0.37
CD9-208ENST00000538834 C20orf27Q9GZN8 174 aa12.71□□□□□ -0.37
CD9-208ENST00000538834 TMBIM4Q9HC24 238 aa12.71□□□□□ -0.37
CD9-208ENST00000538834 SH2D2AQ9NP31 389 aa12.71□□□□□ -0.37
CD9-208ENST00000538834 MYNNQ9NPC7 610 aa12.71□□□□□ -0.37
CD9-208ENST00000538834 RRAGDQ9NQL2 400 aaPredicted RBP12.71□□□□□ -0.37
CD9-208ENST00000538834 LRFN1Q9P244 771 aa12.71□□□□□ -0.37
CD9-208ENST00000538834 ZDHHC2Q9UIJ5 367 aa12.71□□□□□ -0.37
CD9-208ENST00000538834 DLGAP4Q9Y2H0 992 aa12.71□□□□□ -0.37
CD9-208ENST00000538834 TRAF6Q9Y4K3 522 aa12.71□□□□□ -0.37
CD9-208ENST00000538834 PTGDR2Q9Y5Y4 395 aa12.71□□□□□ -0.37
CD9-208ENST00000538834 SPTAN1Q13813 2472 aaKnown RBP12.7□□□□□ -0.38
CD9-208ENST00000538834 DOPEY1Q5JWR5 2465 aa12.7□□□□□ -0.38
CD9-208ENST00000538834 ARHGAP10A1A4S6 786 aa12.7□□□□□ -0.38
CD9-208ENST00000538834 OR6C76A6NM76 312 aa12.7□□□□□ -0.38
CD9-208ENST00000538834 TMEM233B4DJY2 109 aa12.7□□□□□ -0.38
CD9-208ENST00000538834 SLC28A1O00337 649 aa12.7□□□□□ -0.38
CD9-208ENST00000538834 FCHO1O14526 889 aa12.7□□□□□ -0.38
CD9-208ENST00000538834 LSM1O15116 133 aaKnown RBP12.7□□□□□ -0.38
CD9-208ENST00000538834 NME2P1O60361 137 aa12.7□□□□□ -0.38
CD9-208ENST00000538834 TBX19O60806 448 aa12.7□□□□□ -0.38
CD9-208ENST00000538834 ERLIN1O75477 346 aa12.7□□□□□ -0.38
CD9-208ENST00000538834 WISP2O76076 250 aa12.7□□□□□ -0.38
CD9-208ENST00000538834 IL3P08700 152 aa12.7□□□□□ -0.38
CD9-208ENST00000538834 COX7A2P14406 83 aa12.7□□□□□ -0.38
CD9-208ENST00000538834 NME2P22392 152 aa12.7□□□□□ -0.38
CD9-208ENST00000538834 UQCRFS1P47985 274 aa12.7□□□□□ -0.38
CD9-208ENST00000538834 CYB561P49447 251 aa12.7□□□□□ -0.38
CD9-208ENST00000538834 ST13P50502 369 aaKnown RBP12.7□□□□□ -0.38
CD9-208ENST00000538834 WDR4P57081 412 aaKnown RBP12.7□□□□□ -0.38
CD9-208ENST00000538834 KCNC4Q03721 635 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms