RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 EMP2P54851 167 aa10.02□□□□□ -0.81
TNFRSF1A-211ENST00000538363 RPS15P62841 145 aaKnown RBP10.02□□□□□ -0.81
TNFRSF1A-211ENST00000538363 GABREP78334 506 aa10.02□□□□□ -0.81
TNFRSF1A-211ENST00000538363 BTG2P78543 158 aa10.02□□□□□ -0.81
TNFRSF1A-211ENST00000538363 PRR5P85299 388 aa10.02□□□□□ -0.81
TNFRSF1A-211ENST00000538363 NSDHLQ15738 373 aa10.02□□□□□ -0.81
TNFRSF1A-211ENST00000538363 VWA2Q5GFL6 755 aa10.02□□□□□ -0.81
TNFRSF1A-211ENST00000538363 SAMD4BQ5PRF9 694 aaKnown RBP10.02□□□□□ -0.81
TNFRSF1A-211ENST00000538363 SHISA6Q6ZSJ9 500 aa10.02□□□□□ -0.81
TNFRSF1A-211ENST00000538363 OVCH1Q7RTY7 1134 aa10.02□□□□□ -0.81
TNFRSF1A-211ENST00000538363 RETREG3Q86VR2 466 aa10.02□□□□□ -0.81
TNFRSF1A-211ENST00000538363 SCUBE1Q8IWY4 988 aa10.02□□□□□ -0.81
TNFRSF1A-211ENST00000538363 DPP10Q8N608 796 aa10.02□□□□□ -0.81
TNFRSF1A-211ENST00000538363 BMPERQ8N8U9 685 aa10.02□□□□□ -0.81
TNFRSF1A-211ENST00000538363 TNIP2Q8NFZ5 429 aa10.02□□□□□ -0.81
TNFRSF1A-211ENST00000538363 OR5AK3PQ8NH89 298 aa10.02□□□□□ -0.81
TNFRSF1A-211ENST00000538363 MOAP1Q96BY2 351 aa10.02□□□□□ -0.81
TNFRSF1A-211ENST00000538363 LRGUKQ96M69 825 aa10.02□□□□□ -0.81
TNFRSF1A-211ENST00000538363 LRMDAQ9H2I8 198 aa10.02□□□□□ -0.81
TNFRSF1A-211ENST00000538363 GLIPR2Q9H4G4 154 aa10.02□□□□□ -0.81
TNFRSF1A-211ENST00000538363 PIF1Q9H611 641 aa10.02□□□□□ -0.81
TNFRSF1A-211ENST00000538363 SOX17Q9H6I2 414 aaPredicted RBP10.02□□□□□ -0.81
TNFRSF1A-211ENST00000538363 NEUROD4Q9HD90 331 aa10.02□□□□□ -0.81
TNFRSF1A-211ENST00000538363 ZCCHC3Q9NUD5 404 aaKnown RBP10.02□□□□□ -0.81
TNFRSF1A-211ENST00000538363 DDX18Q9NVP1 670 aaKnown RBP10.02□□□□□ -0.81
TNFRSF1A-211ENST00000538363 MAP10Q9P2G4 905 aa10.02□□□□□ -0.81
TNFRSF1A-211ENST00000538363 PRPF19Q9UMS4 504 aaKnown RBP10.02□□□□□ -0.81
TNFRSF1A-211ENST00000538363 FAF1Q9UNN5 650 aaPredicted RBP10.02□□□□□ -0.81
TNFRSF1A-211ENST00000538363 EXO1Q9UQ84 846 aaKnown RBP10.02□□□□□ -0.81
TNFRSF1A-211ENST00000538363 PADI2Q9Y2J8 665 aa10.02□□□□□ -0.81
TNFRSF1A-211ENST00000538363 PCDHB14Q9Y5E9 798 aa10.02□□□□□ -0.81
TNFRSF1A-211ENST00000538363 ADAMTS20P59510 1910 aa10.01□□□□□ -0.81
TNFRSF1A-211ENST00000538363 DCDC2BA2VCK2 349 aa10.01□□□□□ -0.81
TNFRSF1A-211ENST00000538363 SYNDIG1LA6NDD5 238 aa10.01□□□□□ -0.81
TNFRSF1A-211ENST00000538363 MYO1GB0I1T2 1018 aa10.01□□□□□ -0.81
TNFRSF1A-211ENST00000538363 GSC2O15499 205 aa10.01□□□□□ -0.81
TNFRSF1A-211ENST00000538363 EMC8O43402 210 aa10.01□□□□□ -0.81
TNFRSF1A-211ENST00000538363 FGF17O60258 216 aa10.01□□□□□ -0.81
TNFRSF1A-211ENST00000538363 JRKO75564 520 aa10.01□□□□□ -0.81
TNFRSF1A-211ENST00000538363 ZGLP1P0C6A0 271 aa10.01□□□□□ -0.81
TNFRSF1A-211ENST00000538363 SLC35E2P0CK97 266 aa10.01□□□□□ -0.81
TNFRSF1A-211ENST00000538363 NQO1P15559 274 aaKnown RBP10.01□□□□□ -0.81
TNFRSF1A-211ENST00000538363 TCN1P20061 433 aaPredicted RBP10.01□□□□□ -0.81
TNFRSF1A-211ENST00000538363 TCN2P20062 427 aa10.01□□□□□ -0.81
TNFRSF1A-211ENST00000538363 MAOAP21397 527 aa10.01□□□□□ -0.81
TNFRSF1A-211ENST00000538363 ME2P23368 584 aa10.01□□□□□ -0.81
TNFRSF1A-211ENST00000538363 FOLR3P41439 243 aa10.01□□□□□ -0.81
TNFRSF1A-211ENST00000538363 CDKN2CP42773 168 aa10.01□□□□□ -0.81
TNFRSF1A-211ENST00000538363 ID4P47928 161 aa10.01□□□□□ -0.81
TNFRSF1A-211ENST00000538363 ZFP36L2P47974 494 aaKnown RBP10.01□□□□□ -0.81
TNFRSF1A-211ENST00000538363 SLC7A2P52569 658 aa10.01□□□□□ -0.81
TNFRSF1A-211ENST00000538363 WNT3P56703 355 aa10.01□□□□□ -0.81
TNFRSF1A-211ENST00000538363 SNRPNP63162 240 aaKnown RBP10.01□□□□□ -0.81
TNFRSF1A-211ENST00000538363 HBA1P69905 142 aa10.01□□□□□ -0.81
TNFRSF1A-211ENST00000538363 PHC1P78364 1004 aa10.01□□□□□ -0.81
TNFRSF1A-211ENST00000538363 CYP51A1Q16850 503 aa10.01□□□□□ -0.81
TNFRSF1A-211ENST00000538363 ZNF750Q32MQ0 723 aa10.01□□□□□ -0.81
TNFRSF1A-211ENST00000538363 NANOGP8Q6NSW7 305 aa10.01□□□□□ -0.81
TNFRSF1A-211ENST00000538363 TMEM107Q6UX40 140 aa10.01□□□□□ -0.81
TNFRSF1A-211ENST00000538363 TMEM151BQ8IW70 566 aa10.01□□□□□ -0.81
TNFRSF1A-211ENST00000538363 ARHGEF39Q8N4T4 335 aa10.01□□□□□ -0.81
TNFRSF1A-211ENST00000538363 ADCY4Q8NFM4 1077 aa10.01□□□□□ -0.81
TNFRSF1A-211ENST00000538363 OR56A1Q8NGH5 318 aa10.01□□□□□ -0.81
TNFRSF1A-211ENST00000538363 OR9A2Q8NGT5 310 aa10.01□□□□□ -0.81
TNFRSF1A-211ENST00000538363 FBXO27Q8NI29 283 aa10.01□□□□□ -0.81
TNFRSF1A-211ENST00000538363 STT3BQ8TCJ2 826 aa10.01□□□□□ -0.81
TNFRSF1A-211ENST00000538363 PNPT1Q8TCS8 783 aaKnown RBP10.01□□□□□ -0.81
TNFRSF1A-211ENST00000538363 JADE3Q92613 823 aa10.01□□□□□ -0.81
TNFRSF1A-211ENST00000538363 KAT2AQ92830 837 aa10.01□□□□□ -0.81
TNFRSF1A-211ENST00000538363 RIT1Q92963 219 aa10.01□□□□□ -0.81
TNFRSF1A-211ENST00000538363 PPWD1Q96BP3 646 aaKnown RBP10.01□□□□□ -0.81
TNFRSF1A-211ENST00000538363 SLC7A6OSQ96CW6 309 aaPredicted RBP10.01□□□□□ -0.81
TNFRSF1A-211ENST00000538363 CNRIP1Q96F85 164 aaPredicted RBP10.01□□□□□ -0.81
TNFRSF1A-211ENST00000538363 ZNF764Q96H86 408 aaPredicted RBP10.01□□□□□ -0.81
TNFRSF1A-211ENST00000538363 VPS50Q96JG6 964 aa10.01□□□□□ -0.81
TNFRSF1A-211ENST00000538363 SLC35G5Q96KT7 338 aa10.01□□□□□ -0.81
TNFRSF1A-211ENST00000538363 AMDHD1Q96NU7 426 aa10.01□□□□□ -0.81
TNFRSF1A-211ENST00000538363 ANKRD27Q96NW4 1050 aa10.01□□□□□ -0.81
TNFRSF1A-211ENST00000538363 KCTD14Q9BQ13 255 aaPredicted RBP10.01□□□□□ -0.81
TNFRSF1A-211ENST00000538363 SLC39A3Q9BRY0 314 aa10.01□□□□□ -0.81
TNFRSF1A-211ENST00000538363 CRB3Q9BUF7 120 aa10.01□□□□□ -0.81
TNFRSF1A-211ENST00000538363 PAIP1Q9H074 479 aaKnown RBP10.01□□□□□ -0.81
TNFRSF1A-211ENST00000538363 MMADHCQ9H3L0 296 aaPredicted RBP10.01□□□□□ -0.81
TNFRSF1A-211ENST00000538363 NANOGQ9H9S0 305 aa10.01□□□□□ -0.81
TNFRSF1A-211ENST00000538363 POLR1BQ9H9Y6 1135 aa10.01□□□□□ -0.81
TNFRSF1A-211ENST00000538363 CACYBPQ9HB71 228 aaKnown RBP10.01□□□□□ -0.81
TNFRSF1A-211ENST00000538363 C19orf25Q9UFG5 118 aaPredicted RBP10.01□□□□□ -0.81
TNFRSF1A-211ENST00000538363 NXT1Q9UKK6 140 aaKnown RBP10.01□□□□□ -0.81
TNFRSF1A-211ENST00000538363 MAN2B2Q9Y2E5 1009 aa10.01□□□□□ -0.81
TNFRSF1A-211ENST00000538363 CLCA3PQ9Y6N3 262 aa10.01□□□□□ -0.81
TNFRSF1A-211ENST00000538363 LAMA1P25391 3075 aa10.01□□□□□ -0.81
TNFRSF1A-211ENST00000538363 CFAP54Q96N23 3096 aa10.01□□□□□ -0.81
TNFRSF1A-211ENST00000538363 FRYLO94915 3013 aa10.01□□□□□ -0.81
TNFRSF1A-211ENST00000538363 WDR87Q6ZQQ6 2873 aa10□□□□□ -0.81
TNFRSF1A-211ENST00000538363 ASPDHA6ND91 283 aa10□□□□□ -0.81
TNFRSF1A-211ENST00000538363 C5orf58C9J3I9 102 aa10□□□□□ -0.81
TNFRSF1A-211ENST00000538363 H3BMH7 237 aa10□□□□□ -0.81
TNFRSF1A-211ENST00000538363 GPR37O15354 613 aa10□□□□□ -0.81
TNFRSF1A-211ENST00000538363 BRINP1O60477 761 aa10□□□□□ -0.81
TNFRSF1A-211ENST00000538363 BCAS2O75934 225 aaPredicted RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms