RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 PTGES3Q15185 160 aaKnown RBP13.25□□□□□ -0.29
LIMK1-208ENST00000538333 TMEM64Q6YI46 380 aa13.25□□□□□ -0.29
LIMK1-208ENST00000538333 P2RY8Q86VZ1 359 aa13.25□□□□□ -0.29
LIMK1-208ENST00000538333 DEPDC4Q8N2C3 294 aa13.25□□□□□ -0.29
LIMK1-208ENST00000538333 MFSD9Q8NBP5 474 aa13.25□□□□□ -0.29
LIMK1-208ENST00000538333 FNDC8Q8TC99 324 aa13.25□□□□□ -0.29
LIMK1-208ENST00000538333 JPH3Q8WXH2 748 aaPredicted RBP13.25□□□□□ -0.29
LIMK1-208ENST00000538333 PROX1Q92786 737 aa13.25□□□□□ -0.29
LIMK1-208ENST00000538333 GGHQ92820 318 aa13.25□□□□□ -0.29
LIMK1-208ENST00000538333 HSPBAP1Q96EW2 488 aa13.25□□□□□ -0.29
LIMK1-208ENST00000538333 CNRIP1Q96F85 164 aaPredicted RBP13.25□□□□□ -0.29
LIMK1-208ENST00000538333 NECTIN3Q9NQS3 549 aa13.25□□□□□ -0.29
LIMK1-208ENST00000538333 ZCCHC3Q9NUD5 404 aaKnown RBP13.25□□□□□ -0.29
LIMK1-208ENST00000538333 KLF15Q9UIH9 416 aa13.25□□□□□ -0.29
LIMK1-208ENST00000538333 CES1P1Q9UKY3 287 aa13.25□□□□□ -0.29
LIMK1-208ENST00000538333 SCML1Q9UN30 329 aa13.25□□□□□ -0.29
LIMK1-208ENST00000538333 SLC6A14Q9UN76 642 aa13.25□□□□□ -0.29
LIMK1-208ENST00000538333 KLHL20Q9Y2M5 609 aa13.25□□□□□ -0.29
LIMK1-208ENST00000538333 GPC6Q9Y625 555 aaPredicted RBP13.25□□□□□ -0.29
LIMK1-208ENST00000538333 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.24□□□□□ -0.29
LIMK1-208ENST00000538333 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.24□□□□□ -0.29
LIMK1-208ENST00000538333 ZAR1LA6NP61 321 aa13.24□□□□□ -0.29
LIMK1-208ENST00000538333 SLC28A2O43868 658 aa13.24□□□□□ -0.29
LIMK1-208ENST00000538333 SH3BP5O60239 455 aa13.24□□□□□ -0.29
LIMK1-208ENST00000538333 AIFM1O95831 613 aa13.24□□□□□ -0.29
LIMK1-208ENST00000538333 C21orf33P30042 268 aaPredicted RBP13.24□□□□□ -0.29
LIMK1-208ENST00000538333 CMPK1P30085 196 aa13.24□□□□□ -0.29
LIMK1-208ENST00000538333 NTSP30990 170 aa13.24□□□□□ -0.29
LIMK1-208ENST00000538333 GPC1P35052 558 aa13.24□□□□□ -0.29
LIMK1-208ENST00000538333 HTR4Q13639 388 aa13.24□□□□□ -0.29
LIMK1-208ENST00000538333 TBCEQ15813 527 aaPredicted RBP13.24□□□□□ -0.29
LIMK1-208ENST00000538333 TOR1AIP1Q5JTV8 583 aa13.24□□□□□ -0.29
LIMK1-208ENST00000538333 TPRG1LQ5T0D9 272 aa13.24□□□□□ -0.29
LIMK1-208ENST00000538333 MTSS1LQ765P7 747 aa13.24□□□□□ -0.29
LIMK1-208ENST00000538333 COMTD1Q86VU5 262 aa13.24□□□□□ -0.29
LIMK1-208ENST00000538333 RBM45Q8IUH3 476 aaKnown RBP13.24□□□□□ -0.29
LIMK1-208ENST00000538333 TAGAPQ8N103 731 aa13.24□□□□□ -0.29
LIMK1-208ENST00000538333 UTP15Q8TED0 518 aaKnown RBP13.24□□□□□ -0.29
LIMK1-208ENST00000538333 RASSF5Q8WWW0 418 aa13.24□□□□□ -0.29
LIMK1-208ENST00000538333 SIPA1Q96FS4 1042 aa13.24□□□□□ -0.29
LIMK1-208ENST00000538333 COL21A1Q96P44 957 aa13.24□□□□□ -0.29
LIMK1-208ENST00000538333 ZNF607Q96SK3 696 aa13.24□□□□□ -0.29
LIMK1-208ENST00000538333 MAPKAP1Q9BPZ7 522 aa13.24□□□□□ -0.29
LIMK1-208ENST00000538333 AMBNQ9NP70 447 aa13.24□□□□□ -0.29
LIMK1-208ENST00000538333 CD93Q9NPY3 652 aa13.24□□□□□ -0.29
LIMK1-208ENST00000538333 ETAA1Q9NY74 926 aa13.24□□□□□ -0.29
LIMK1-208ENST00000538333 OR6C2Q9NZP2 312 aa13.24□□□□□ -0.29
LIMK1-208ENST00000538333 APOBEC3BQ9UH17 382 aaKnown RBP13.24□□□□□ -0.29
LIMK1-208ENST00000538333 ENOPH1Q9UHY7 261 aa13.24□□□□□ -0.29
LIMK1-208ENST00000538333 COLEC10Q9Y6Z7 277 aa13.24□□□□□ -0.29
LIMK1-208ENST00000538333 H0Y8X5 98 aa13.24□□□□□ -0.29
LIMK1-208ENST00000538333 CDK1P06493 297 aa13.24□□□□□ -0.29
LIMK1-208ENST00000538333 CHRM5P08912 532 aaPredicted RBP13.24□□□□□ -0.29
LIMK1-208ENST00000538333 CHMP24386 653 aa13.24□□□□□ -0.29
LIMK1-208ENST00000538333 ELAVL4P26378 380 aaKnown RBP13.24□□□□□ -0.29
LIMK1-208ENST00000538333 AK4P27144 223 aaPredicted RBP13.24□□□□□ -0.29
LIMK1-208ENST00000538333 CERS1P27544 350 aa13.24□□□□□ -0.29
LIMK1-208ENST00000538333 MAGEA8P43361 318 aa13.24□□□□□ -0.29
LIMK1-208ENST00000538333 FUT5Q11128 374 aa13.24□□□□□ -0.29
LIMK1-208ENST00000538333 SEC23BQ15437 767 aa13.24□□□□□ -0.29
LIMK1-208ENST00000538333 GPR19Q15760 415 aa13.24□□□□□ -0.29
LIMK1-208ENST00000538333 ZNF750Q32MQ0 723 aa13.24□□□□□ -0.29
LIMK1-208ENST00000538333 USP30Q70CQ3 517 aa13.24□□□□□ -0.29
LIMK1-208ENST00000538333 AMIGO1Q86WK6 493 aa13.24□□□□□ -0.29
LIMK1-208ENST00000538333 LACC1Q8IV20 430 aa13.24□□□□□ -0.29
LIMK1-208ENST00000538333 NLGN4XQ8N0W4 816 aa13.24□□□□□ -0.29
LIMK1-208ENST00000538333 XAGE5Q8WWM1 108 aa13.24□□□□□ -0.29
LIMK1-208ENST00000538333 FCGR1BQ92637 280 aa13.24□□□□□ -0.29
LIMK1-208ENST00000538333 BBS4Q96RK4 519 aa13.24□□□□□ -0.29
LIMK1-208ENST00000538333 FUZQ9BT04 418 aa13.24□□□□□ -0.29
LIMK1-208ENST00000538333 SELENONQ9NZV5 590 aa13.24□□□□□ -0.29
LIMK1-208ENST00000538333 SEC14L3Q9UDX4 400 aa13.24□□□□□ -0.29
LIMK1-208ENST00000538333 CA5BQ9Y2D0 317 aa13.24□□□□□ -0.29
LIMK1-208ENST00000538333 M0R129 80 aa13.23□□□□□ -0.29
LIMK1-208ENST00000538333 KDM1AO60341 852 aa13.23□□□□□ -0.29
LIMK1-208ENST00000538333 ERAL1O75616 437 aaKnown RBP13.23□□□□□ -0.29
LIMK1-208ENST00000538333 ADAP00813 363 aa13.23□□□□□ -0.29
LIMK1-208ENST00000538333 PTGER1P34995 402 aa13.23□□□□□ -0.29
LIMK1-208ENST00000538333 TSFMP43897 325 aaKnown RBP13.23□□□□□ -0.29
LIMK1-208ENST00000538333 CRISP1P54107 249 aa13.23□□□□□ -0.29
LIMK1-208ENST00000538333 NFATC4Q14934 902 aa13.23□□□□□ -0.29
LIMK1-208ENST00000538333 RAB30Q15771 203 aa13.23□□□□□ -0.29
LIMK1-208ENST00000538333 C18orf63Q68DL7 685 aa13.23□□□□□ -0.29
LIMK1-208ENST00000538333 FRMPD2BQ6IN97 320 aa13.23□□□□□ -0.29
LIMK1-208ENST00000538333 SLC48A1Q6P1K1 146 aa13.23□□□□□ -0.29
LIMK1-208ENST00000538333 ENPP7Q6UWV6 458 aa13.23□□□□□ -0.29
LIMK1-208ENST00000538333 SZRD1Q7Z422 152 aa13.23□□□□□ -0.29
LIMK1-208ENST00000538333 PAQR7Q86WK9 346 aa13.23□□□□□ -0.29
LIMK1-208ENST00000538333 TBC1D19Q8N5T2 526 aa13.23□□□□□ -0.29
LIMK1-208ENST00000538333 SLC15A4Q8N697 577 aa13.23□□□□□ -0.29
LIMK1-208ENST00000538333 OR4E2Q8NGC2 313 aa13.23□□□□□ -0.29
LIMK1-208ENST00000538333 NDNFQ8TB73 568 aa13.23□□□□□ -0.29
LIMK1-208ENST00000538333 SFXN5Q8TD22 340 aa13.23□□□□□ -0.29
LIMK1-208ENST00000538333 MYDGFQ969H8 173 aa13.23□□□□□ -0.29
LIMK1-208ENST00000538333 BMFQ96LC9 184 aa13.23□□□□□ -0.29
LIMK1-208ENST00000538333 RIPOR3Q96MK2 946 aa13.23□□□□□ -0.29
LIMK1-208ENST00000538333 BCL2L10Q9HD36 194 aa13.23□□□□□ -0.29
LIMK1-208ENST00000538333 ZNF624Q9P2J8 865 aaPredicted RBP13.23□□□□□ -0.29
LIMK1-208ENST00000538333 PCOLCE2Q9UKZ9 415 aa13.23□□□□□ -0.29
LIMK1-208ENST00000538333 SNX7Q9UNH6 387 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms