RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 FOLR1P15328 257 aa4.09□□□□□ -1.75
SNHG1-208ENST00000538266 NPPBP16860 134 aa4.09□□□□□ -1.75
SNHG1-208ENST00000538266 GSTM2P28161 218 aa4.09□□□□□ -1.75
SNHG1-208ENST00000538266 PTPN4P29074 926 aa4.09□□□□□ -1.75
SNHG1-208ENST00000538266 TSPAN7P41732 249 aa4.09□□□□□ -1.75
SNHG1-208ENST00000538266 GRIA3P42263 894 aa4.09□□□□□ -1.75
SNHG1-208ENST00000538266 SLC6A12P48065 614 aa4.09□□□□□ -1.75
SNHG1-208ENST00000538266 PTDSS1P48651 473 aaKnown RBP4.09□□□□□ -1.75
SNHG1-208ENST00000538266 MAPK10P53779 464 aa4.09□□□□□ -1.75
SNHG1-208ENST00000538266 PTTG1IPP53801 180 aa4.09□□□□□ -1.75
SNHG1-208ENST00000538266 PRKAA2P54646 552 aa4.09□□□□□ -1.75
SNHG1-208ENST00000538266 SH3BGRP55822 239 aaPredicted RBP4.09□□□□□ -1.75
SNHG1-208ENST00000538266 RPS15AP62244 130 aaKnown RBP4.09□□□□□ -1.75
SNHG1-208ENST00000538266 PHEXP78562 749 aa4.09□□□□□ -1.75
SNHG1-208ENST00000538266 ROR2Q01974 943 aaKnown RBP4.09□□□□□ -1.75
SNHG1-208ENST00000538266 IRF8Q02556 426 aa4.09□□□□□ -1.75
SNHG1-208ENST00000538266 NHLH2Q02577 135 aa4.09□□□□□ -1.75
SNHG1-208ENST00000538266 RGS1Q08116 209 aa4.09□□□□□ -1.75
SNHG1-208ENST00000538266 GTF2H2Q13888 395 aa4.09□□□□□ -1.75
SNHG1-208ENST00000538266 IL11RAQ14626 422 aa4.09□□□□□ -1.75
SNHG1-208ENST00000538266 C16orf72Q14CZ0 275 aa4.09□□□□□ -1.75
SNHG1-208ENST00000538266 HIST2H2ACQ16777 129 aaPredicted RBP4.09□□□□□ -1.75
SNHG1-208ENST00000538266 DEFB110Q30KQ9 67 aa4.09□□□□□ -1.75
SNHG1-208ENST00000538266 RABL3Q5HYI8 236 aa4.09□□□□□ -1.75
SNHG1-208ENST00000538266 DCAF12Q5T6F0 453 aa4.09□□□□□ -1.75
SNHG1-208ENST00000538266 LIPMQ5VYY2 423 aa4.09□□□□□ -1.75
SNHG1-208ENST00000538266 ATG9BQ674R7 924 aa4.09□□□□□ -1.75
SNHG1-208ENST00000538266 HIST2H2AA3Q6FI13 130 aa4.09□□□□□ -1.75
SNHG1-208ENST00000538266 GTF2H2CQ6P1K8 395 aa4.09□□□□□ -1.75
SNHG1-208ENST00000538266 ZNF529Q6P280 563 aa4.09□□□□□ -1.75
SNHG1-208ENST00000538266 FIGLAQ6QHK4 219 aa4.09□□□□□ -1.75
SNHG1-208ENST00000538266 CEACAM20Q6UY09 585 aa4.09□□□□□ -1.75
SNHG1-208ENST00000538266 SH2D5Q6ZV89 423 aa4.09□□□□□ -1.75
SNHG1-208ENST00000538266 GPRIN3Q6ZVF9 776 aa4.09□□□□□ -1.75
SNHG1-208ENST00000538266 MED25Q71SY5 747 aa4.09□□□□□ -1.75
SNHG1-208ENST00000538266 GOLGA7Q7Z5G4 137 aa4.09□□□□□ -1.75
SNHG1-208ENST00000538266 ARHGAP22Q7Z5H3 698 aa4.09□□□□□ -1.75
SNHG1-208ENST00000538266 PPP1R3BQ86XI6 285 aa4.09□□□□□ -1.75
SNHG1-208ENST00000538266 TMEM126BQ8IUX1 230 aa4.09□□□□□ -1.75
SNHG1-208ENST00000538266 KIRREL3Q8IZU9 778 aa4.09□□□□□ -1.75
SNHG1-208ENST00000538266 LSMEM2Q8N112 164 aa4.09□□□□□ -1.75
SNHG1-208ENST00000538266 ABHD11Q8NFV4 315 aa4.09□□□□□ -1.75
SNHG1-208ENST00000538266 TTLQ8NG68 377 aa4.09□□□□□ -1.75
SNHG1-208ENST00000538266 OR10H5Q8NGA6 315 aa4.09□□□□□ -1.75
SNHG1-208ENST00000538266 FLVCR1-AS1Q8TAF5 88 aa4.09□□□□□ -1.75
SNHG1-208ENST00000538266 CPT1CQ8TCG5 803 aa4.09□□□□□ -1.75
SNHG1-208ENST00000538266 ZNF483Q8TF39 744 aaPredicted RBP4.09□□□□□ -1.75
SNHG1-208ENST00000538266 UBE2E3Q969T4 207 aa4.09□□□□□ -1.75
SNHG1-208ENST00000538266 ESAMQ96AP7 390 aa4.09□□□□□ -1.75
SNHG1-208ENST00000538266 MCUR1Q96AQ8 359 aa4.09□□□□□ -1.75
SNHG1-208ENST00000538266 REPS1Q96D71 796 aa4.09□□□□□ -1.75
SNHG1-208ENST00000538266 L3HYPDHQ96EM0 354 aa4.09□□□□□ -1.75
SNHG1-208ENST00000538266 PTCD3Q96EY7 689 aaKnown RBP4.09□□□□□ -1.75
SNHG1-208ENST00000538266 SLC41A2Q96JW4 573 aa4.09□□□□□ -1.75
SNHG1-208ENST00000538266 MRGPRX4Q96LA9 322 aa4.09□□□□□ -1.75
SNHG1-208ENST00000538266 PRAP1Q96NZ9 151 aa4.09□□□□□ -1.75
SNHG1-208ENST00000538266 TEFMQ96QE5 360 aaKnown RBP4.09□□□□□ -1.75
SNHG1-208ENST00000538266 OR4K3Q96R72 315 aa4.09□□□□□ -1.75
SNHG1-208ENST00000538266 OR6C1Q96RD1 312 aa4.09□□□□□ -1.75
SNHG1-208ENST00000538266 TAAR9Q96RI9 348 aa4.09□□□□□ -1.75
SNHG1-208ENST00000538266 DMRTA2Q96SC8 542 aa4.09□□□□□ -1.75
SNHG1-208ENST00000538266 VRK1Q99986 396 aaPredicted RBP4.09□□□□□ -1.75
SNHG1-208ENST00000538266 NDC1Q9BTX1 674 aa4.09□□□□□ -1.75
SNHG1-208ENST00000538266 CCDC28BQ9BUN5 200 aa4.09□□□□□ -1.75
SNHG1-208ENST00000538266 EFCAB11Q9BUY7 163 aa4.09□□□□□ -1.75
SNHG1-208ENST00000538266 SCNM1Q9BWG6 230 aa4.09□□□□□ -1.75
SNHG1-208ENST00000538266 ULBP3Q9BZM4 244 aa4.09□□□□□ -1.75
SNHG1-208ENST00000538266 FAM192AQ9GZU8 254 aa4.09□□□□□ -1.75
SNHG1-208ENST00000538266 EHD1Q9H4M9 534 aa4.09□□□□□ -1.75
SNHG1-208ENST00000538266 GSTO2Q9H4Y5 243 aa4.09□□□□□ -1.75
SNHG1-208ENST00000538266 ZNF703Q9H7S9 590 aaPredicted RBP4.09□□□□□ -1.75
SNHG1-208ENST00000538266 POLR1BQ9H9Y6 1135 aa4.09□□□□□ -1.75
SNHG1-208ENST00000538266 PELI2Q9HAT8 420 aa4.09□□□□□ -1.75
SNHG1-208ENST00000538266 SEMA4BQ9NPR2 832 aaPredicted RBP4.09□□□□□ -1.75
SNHG1-208ENST00000538266 THSD1Q9NS62 852 aa4.09□□□□□ -1.75
SNHG1-208ENST00000538266 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.09□□□□□ -1.75
SNHG1-208ENST00000538266 NMRK1Q9NWW6 199 aa4.09□□□□□ -1.75
SNHG1-208ENST00000538266 SLC39A1Q9NY26 324 aa4.09□□□□□ -1.75
SNHG1-208ENST00000538266 SEMA5BQ9P283 1151 aa4.09□□□□□ -1.75
SNHG1-208ENST00000538266 NKX1-2Q9UD57 310 aaPredicted RBP4.09□□□□□ -1.75
SNHG1-208ENST00000538266 SLC23A1Q9UHI7 598 aa4.09□□□□□ -1.75
SNHG1-208ENST00000538266 HAO1Q9UJM8 370 aa4.09□□□□□ -1.75
SNHG1-208ENST00000538266 SERTAD3Q9UJW9 196 aa4.09□□□□□ -1.75
SNHG1-208ENST00000538266 PCTPQ9UKL6 214 aa4.09□□□□□ -1.75
SNHG1-208ENST00000538266 KLK13Q9UKR3 277 aa4.09□□□□□ -1.75
SNHG1-208ENST00000538266 ANGPTL2Q9UKU9 493 aa4.09□□□□□ -1.75
SNHG1-208ENST00000538266 RARRES3Q9UL19 164 aa4.09□□□□□ -1.75
SNHG1-208ENST00000538266 EMCNQ9ULC0 261 aa4.09□□□□□ -1.75
SNHG1-208ENST00000538266 PLCL2Q9UPR0 1127 aa4.09□□□□□ -1.75
SNHG1-208ENST00000538266 SH2B3Q9UQQ2 575 aa4.09□□□□□ -1.75
SNHG1-208ENST00000538266 MYRFQ9Y2G1 1151 aa4.09□□□□□ -1.75
SNHG1-208ENST00000538266 KLHL20Q9Y2M5 609 aa4.09□□□□□ -1.75
SNHG1-208ENST00000538266 NEUROG3Q9Y4Z2 214 aa4.09□□□□□ -1.75
SNHG1-208ENST00000538266 KLK4Q9Y5K2 254 aa4.09□□□□□ -1.75
SNHG1-208ENST00000538266 CEP250Q9BV73 2442 aa4.09□□□□□ -1.76
SNHG1-208ENST00000538266 PIEZO1Q92508 2521 aa4.09□□□□□ -1.76
SNHG1-208ENST00000538266 IGKV1-8A0A0C4DH67 115 aa4.08□□□□□ -1.76
SNHG1-208ENST00000538266 FEZF1A0PJY2 475 aa4.08□□□□□ -1.76
SNHG1-208ENST00000538266 WDR91A4D1P6 747 aa4.08□□□□□ -1.76
SNHG1-208ENST00000538266 DPPA5A6NC42 116 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms