RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 GALNTL5Q7Z4T8 443 aa7.79□□□□□ -1.16
SPARC-208ENST00000538026 FGD2Q7Z6J4 655 aa7.79□□□□□ -1.16
SPARC-208ENST00000538026 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.79□□□□□ -1.16
SPARC-208ENST00000538026 EXOC3L1Q86VI1 746 aa7.79□□□□□ -1.16
SPARC-208ENST00000538026 SRRM1Q8IYB3 904 aaKnown RBP7.79□□□□□ -1.16
SPARC-208ENST00000538026 ST13P4Q8IZP2 240 aaPredicted RBP7.79□□□□□ -1.16
SPARC-208ENST00000538026 RIBC1Q8N443 379 aaPredicted RBP7.79□□□□□ -1.16
SPARC-208ENST00000538026 ZNF615Q8N8J6 731 aa7.79□□□□□ -1.16
SPARC-208ENST00000538026 ZNF441Q8N8Z8 693 aa7.79□□□□□ -1.16
SPARC-208ENST00000538026 ST6GALNAC3Q8NDV1 305 aa7.79□□□□□ -1.16
SPARC-208ENST00000538026 OR2T11Q8NH01 316 aa7.79□□□□□ -1.16
SPARC-208ENST00000538026 RDH11Q8TC12 318 aa7.79□□□□□ -1.16
SPARC-208ENST00000538026 NR4A3Q92570 626 aa7.79□□□□□ -1.16
SPARC-208ENST00000538026 CNRIP1Q96F85 164 aaPredicted RBP7.79□□□□□ -1.16
SPARC-208ENST00000538026 FBXL20Q96IG2 436 aa7.79□□□□□ -1.16
SPARC-208ENST00000538026 APOPT1Q96IL0 206 aa7.79□□□□□ -1.16
SPARC-208ENST00000538026 FRMD6Q96NE9 622 aa7.79□□□□□ -1.16
SPARC-208ENST00000538026 ZIM3Q96PE6 472 aa7.79□□□□□ -1.16
SPARC-208ENST00000538026 PSMG3-AS1Q96PY0 264 aa7.79□□□□□ -1.16
SPARC-208ENST00000538026 FAM111AQ96PZ2 611 aa7.79□□□□□ -1.16
SPARC-208ENST00000538026 RASL10BQ96S79 203 aa7.79□□□□□ -1.16
SPARC-208ENST00000538026 UTP23Q9BRU9 249 aaKnown RBP7.79□□□□□ -1.16
SPARC-208ENST00000538026 ZNF395Q9H8N7 513 aaPredicted RBP7.79□□□□□ -1.16
SPARC-208ENST00000538026 CXorf21Q9HAI6 301 aa7.79□□□□□ -1.16
SPARC-208ENST00000538026 PROK2Q9HC23 129 aa7.79□□□□□ -1.16
SPARC-208ENST00000538026 SH2D2AQ9NP31 389 aa7.79□□□□□ -1.16
SPARC-208ENST00000538026 SIRT5Q9NXA8 310 aa7.79□□□□□ -1.16
SPARC-208ENST00000538026 LRFN1Q9P244 771 aa7.79□□□□□ -1.16
SPARC-208ENST00000538026 MYOTQ9UBF9 498 aa7.79□□□□□ -1.16
SPARC-208ENST00000538026 ZNF639Q9UID6 485 aa7.79□□□□□ -1.16
SPARC-208ENST00000538026 TEKT2Q9UIF3 430 aa7.79□□□□□ -1.16
SPARC-208ENST00000538026 ERRFI1Q9UJM3 462 aaPredicted RBP7.79□□□□□ -1.16
SPARC-208ENST00000538026 VPS4AQ9UN37 437 aa7.79□□□□□ -1.16
SPARC-208ENST00000538026 SNX6Q9UNH7 406 aa7.79□□□□□ -1.16
SPARC-208ENST00000538026 CLCA3PQ9Y6N3 262 aa7.79□□□□□ -1.16
SPARC-208ENST00000538026 CACNA1CQ13936 2221 aa7.79□□□□□ -1.16
SPARC-208ENST00000538026 MAP1AP78559 2803 aaPredicted RBP7.78□□□□□ -1.16
SPARC-208ENST00000538026 ANKUB1A6NFN9 424 aa7.78□□□□□ -1.16
SPARC-208ENST00000538026 NME2P1O60361 137 aa7.78□□□□□ -1.16
SPARC-208ENST00000538026 TRIM13O60858 407 aa7.78□□□□□ -1.16
SPARC-208ENST00000538026 KRT6AP02538 564 aa7.78□□□□□ -1.16
SPARC-208ENST00000538026 KRT6BP04259 564 aa7.78□□□□□ -1.16
SPARC-208ENST00000538026 ENO1P06733 434 aaKnown RBP7.78□□□□□ -1.16
SPARC-208ENST00000538026 HSD3B1P14060 373 aa7.78□□□□□ -1.16
SPARC-208ENST00000538026 TNNI3P19429 210 aa7.78□□□□□ -1.16
SPARC-208ENST00000538026 NME2P22392 152 aa7.78□□□□□ -1.16
SPARC-208ENST00000538026 TACR1P25103 407 aa7.78□□□□□ -1.16
SPARC-208ENST00000538026 HSD3B2P26439 372 aa7.78□□□□□ -1.16
SPARC-208ENST00000538026 SSTR4P31391 388 aa7.78□□□□□ -1.16
SPARC-208ENST00000538026 FEN1P39748 380 aaKnown RBP7.78□□□□□ -1.16
SPARC-208ENST00000538026 SOX3P41225 446 aa7.78□□□□□ -1.16
SPARC-208ENST00000538026 KRT6CP48668 564 aa7.78□□□□□ -1.16
SPARC-208ENST00000538026 XKP51811 444 aa7.78□□□□□ -1.16
SPARC-208ENST00000538026 MAPK12P53778 367 aa7.78□□□□□ -1.16
SPARC-208ENST00000538026 TAS2R50P59544 299 aa7.78□□□□□ -1.16
SPARC-208ENST00000538026 ERVK-8P63133 956 aa7.78□□□□□ -1.16
SPARC-208ENST00000538026 PHEXP78562 749 aa7.78□□□□□ -1.16
SPARC-208ENST00000538026 OC90Q02509 493 aaPredicted RBP7.78□□□□□ -1.16
SPARC-208ENST00000538026 BTKQ06187 659 aa7.78□□□□□ -1.16
SPARC-208ENST00000538026 FUT7Q11130 342 aa7.78□□□□□ -1.16
SPARC-208ENST00000538026 CSTF3Q12996 717 aaKnown RBP7.78□□□□□ -1.16
SPARC-208ENST00000538026 RCN2Q14257 317 aa7.78□□□□□ -1.16
SPARC-208ENST00000538026 ZNF267Q14586 743 aaPredicted RBP7.78□□□□□ -1.16
SPARC-208ENST00000538026 SPRED3Q2MJR0 410 aa7.78□□□□□ -1.16
SPARC-208ENST00000538026 PIGGQ5H8A4 983 aa7.78□□□□□ -1.16
SPARC-208ENST00000538026 BEND6Q5SZJ8 279 aaPredicted RBP7.78□□□□□ -1.16
SPARC-208ENST00000538026 SLC48A1Q6P1K1 146 aa7.78□□□□□ -1.16
SPARC-208ENST00000538026 GALNT18Q6P9A2 607 aa7.78□□□□□ -1.16
SPARC-208ENST00000538026 FAM111BQ6SJ93 734 aa7.78□□□□□ -1.16
SPARC-208ENST00000538026 HSDL2Q6YN16 418 aa7.78□□□□□ -1.16
SPARC-208ENST00000538026 ZCCHC23Q6ZST2 131 aa7.78□□□□□ -1.16
SPARC-208ENST00000538026 ATCAYQ86WG3 371 aa7.78□□□□□ -1.16
SPARC-208ENST00000538026 SULF2Q8IWU5 870 aa7.78□□□□□ -1.16
SPARC-208ENST00000538026 CPSF7Q8N684 471 aaKnown RBP7.78□□□□□ -1.16
SPARC-208ENST00000538026 OR8K3Q8NH51 312 aa7.78□□□□□ -1.16
SPARC-208ENST00000538026 C16orf78Q8WTQ4 265 aa7.78□□□□□ -1.16
SPARC-208ENST00000538026 DAZLQ92904 295 aaKnown RBP7.78□□□□□ -1.16
SPARC-208ENST00000538026 NTNG2Q96CW9 530 aa7.78□□□□□ -1.16
SPARC-208ENST00000538026 CCDC126Q96EE4 140 aa7.78□□□□□ -1.16
SPARC-208ENST00000538026 DGAT2Q96PD7 388 aa7.78□□□□□ -1.16
SPARC-208ENST00000538026 CENPKQ9BS16 269 aa7.78□□□□□ -1.16
SPARC-208ENST00000538026 EBPLQ9BY08 206 aa7.78□□□□□ -1.16
SPARC-208ENST00000538026 C20orf27Q9GZN8 174 aa7.78□□□□□ -1.16
SPARC-208ENST00000538026 AHSPQ9NZD4 102 aa7.78□□□□□ -1.16
SPARC-208ENST00000538026 ABI3Q9P2A4 366 aa7.78□□□□□ -1.16
SPARC-208ENST00000538026 ERVK-19Q9WJR5 959 aa7.78□□□□□ -1.16
SPARC-208ENST00000538026 DTX4Q9Y2E6 619 aa7.78□□□□□ -1.16
SPARC-208ENST00000538026 DLGAP4Q9Y2H0 992 aa7.78□□□□□ -1.16
SPARC-208ENST00000538026 YARS2Q9Y2Z4 477 aaKnown RBP7.78□□□□□ -1.16
SPARC-208ENST00000538026 NPIPB8E9PQR5 432 aa7.77□□□□□ -1.17
SPARC-208ENST00000538026 CDK2AP1O14519 115 aa7.77□□□□□ -1.17
SPARC-208ENST00000538026 ITM2AO43736 263 aa7.77□□□□□ -1.17
SPARC-208ENST00000538026 SLC25A12O75746 678 aa7.77□□□□□ -1.17
SPARC-208ENST00000538026 RASAL1O95294 804 aa7.77□□□□□ -1.17
SPARC-208ENST00000538026 CBX7O95931 251 aa7.77□□□□□ -1.17
SPARC-208ENST00000538026 BPGMP07738 259 aa7.77□□□□□ -1.17
SPARC-208ENST00000538026 FGF4P08620 206 aa7.77□□□□□ -1.17
SPARC-208ENST00000538026 IL3P08700 152 aa7.77□□□□□ -1.17
SPARC-208ENST00000538026 DHRS4L1P0CG22 281 aa7.77□□□□□ -1.17
SPARC-208ENST00000538026 EDN3P14138 238 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms