RNA–Protein interactions for RNA: ENST00000537178.5

CLIP1-209, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLIP1, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-209ENST00000537178 KCNQ1P51787 676 aa10.21□□□□□ -0.78
CLIP1-209ENST00000537178 ARL6IP1Q15041 203 aa10.21□□□□□ -0.78
CLIP1-209ENST00000537178 ATP6AP1Q15904 470 aa10.21□□□□□ -0.78
CLIP1-209ENST00000537178 C6orf136Q5SQH8 315 aa10.21□□□□□ -0.78
CLIP1-209ENST00000537178 OR56B2PQ8NGI1 322 aa10.21□□□□□ -0.78
CLIP1-209ENST00000537178 PEX13Q92968 403 aa10.21□□□□□ -0.78
CLIP1-209ENST00000537178 KLHDC7BQ96G42 594 aa10.21□□□□□ -0.78
CLIP1-209ENST00000537178 PGAM5Q96HS1 289 aa10.21□□□□□ -0.78
CLIP1-209ENST00000537178 ZFP57Q9NU63 452 aa10.21□□□□□ -0.78
CLIP1-209ENST00000537178 A0A096LPI6 279 aa10.2□□□□□ -0.78
CLIP1-209ENST00000537178 A0A1B0GVG6 124 aa10.2□□□□□ -0.78
CLIP1-209ENST00000537178 SLC22A31A6NKX4 558 aa10.2□□□□□ -0.78
CLIP1-209ENST00000537178 GGT2P36268 569 aa10.2□□□□□ -0.78
CLIP1-209ENST00000537178 CDNFQ49AH0 187 aa10.2□□□□□ -0.78
CLIP1-209ENST00000537178 RNASE10Q5GAN6 216 aaKnown RBP10.2□□□□□ -0.78
CLIP1-209ENST00000537178 ZNF678Q5SXM1 525 aa10.2□□□□□ -0.78
CLIP1-209ENST00000537178 LIPJQ5W064 366 aa10.2□□□□□ -0.78
CLIP1-209ENST00000537178 CES4AQ5XG92 561 aa10.2□□□□□ -0.78
CLIP1-209ENST00000537178 ANKLE1Q8NAG6 615 aa10.2□□□□□ -0.78
CLIP1-209ENST00000537178 MEAF6Q9HAF1 191 aa10.2□□□□□ -0.78
CLIP1-209ENST00000537178 MGAT4CQ9UBM8 478 aa10.2□□□□□ -0.78
CLIP1-209ENST00000537178 B4GALT7Q9UBV7 327 aa10.2□□□□□ -0.78
CLIP1-209ENST00000537178 UBE2J1Q9Y385 318 aaPredicted RBP10.2□□□□□ -0.78
CLIP1-209ENST00000537178 CIB4A0PJX0 185 aa10.2□□□□□ -0.78
CLIP1-209ENST00000537178 C11orf98E9PRG8 122 aa10.2□□□□□ -0.78
CLIP1-209ENST00000537178 SSX4O60224 188 aa10.2□□□□□ -0.78
CLIP1-209ENST00000537178 USP2O75604 605 aaPredicted RBP10.2□□□□□ -0.78
CLIP1-209ENST00000537178 HPRP00739 348 aa10.2□□□□□ -0.78
CLIP1-209ENST00000537178 MRPL3P09001 348 aaKnown RBP10.2□□□□□ -0.78
CLIP1-209ENST00000537178 MLLT1Q03111 559 aaPredicted RBP10.2□□□□□ -0.78
CLIP1-209ENST00000537178 LRP8Q14114 963 aa10.2□□□□□ -0.78
CLIP1-209ENST00000537178 C6orf141Q5SZD1 244 aa10.2□□□□□ -0.78
CLIP1-209ENST00000537178 CDCA2Q69YH5 1023 aaPredicted RBP10.2□□□□□ -0.78
CLIP1-209ENST00000537178 C3P1Q6ZMU1 363 aa10.2□□□□□ -0.78
CLIP1-209ENST00000537178 COMTD1Q86VU5 262 aa10.2□□□□□ -0.78
CLIP1-209ENST00000537178 ARL14Q8N4G2 192 aa10.2□□□□□ -0.78
CLIP1-209ENST00000537178 DEFB126Q9BYW3 111 aa10.2□□□□□ -0.78
CLIP1-209ENST00000537178 LIN28AQ9H9Z2 209 aaKnown RBP10.2□□□□□ -0.78
CLIP1-209ENST00000537178 CLDND1Q9NY35 253 aa10.2□□□□□ -0.78
CLIP1-209ENST00000537178 B4GALT6Q9UBX8 382 aa10.2□□□□□ -0.78
CLIP1-209ENST00000537178 EP400Q96L91 3159 aa10.2□□□□□ -0.78
CLIP1-209ENST00000537178 ADAMTSL1Q8N6G6 1762 aa10.2□□□□□ -0.78
CLIP1-209ENST00000537178 ZNF850A8MQ14 1090 aa10.2□□□□□ -0.78
CLIP1-209ENST00000537178 TM4SF1P30408 202 aa10.2□□□□□ -0.78
CLIP1-209ENST00000537178 ACTA2P62736 377 aa10.2□□□□□ -0.78
CLIP1-209ENST00000537178 ACTG2P63267 376 aa10.2□□□□□ -0.78
CLIP1-209ENST00000537178 ZNF616Q08AN1 781 aa10.2□□□□□ -0.78
CLIP1-209ENST00000537178 LAPTM4AQ15012 233 aa10.2□□□□□ -0.78
CLIP1-209ENST00000537178 GPR157Q5UAW9 335 aa10.2□□□□□ -0.78
CLIP1-209ENST00000537178 LIPKQ5VXJ0 399 aa10.2□□□□□ -0.78
CLIP1-209ENST00000537178 NANOGP8Q6NSW7 305 aa10.2□□□□□ -0.78
CLIP1-209ENST00000537178 CHCHD4Q8N4Q1 142 aa10.2□□□□□ -0.78
CLIP1-209ENST00000537178 MS4A15Q8N5U1 240 aa10.2□□□□□ -0.78
CLIP1-209ENST00000537178 IRF7Q92985 503 aa10.2□□□□□ -0.78
CLIP1-209ENST00000537178 ISOC1Q96CN7 298 aa10.2□□□□□ -0.78
CLIP1-209ENST00000537178 RRNAD1Q96FB5 475 aaKnown RBP10.2□□□□□ -0.78
CLIP1-209ENST00000537178 PTCHD1Q96NR3 888 aa10.2□□□□□ -0.78
CLIP1-209ENST00000537178 MUS81Q96NY9 551 aa10.2□□□□□ -0.78
CLIP1-209ENST00000537178 PIP5K1AQ99755 562 aa10.2□□□□□ -0.78
CLIP1-209ENST00000537178 DOHHQ9BU89 302 aa10.2□□□□□ -0.78
CLIP1-209ENST00000537178 TP63Q9H3D4 680 aaPredicted RBP10.2□□□□□ -0.78
CLIP1-209ENST00000537178 NANOGQ9H9S0 305 aa10.2□□□□□ -0.78
CLIP1-209ENST00000537178 FOLH1BQ9HBA9 442 aa10.2□□□□□ -0.78
CLIP1-209ENST00000537178 TAS2R8Q9NYW2 309 aa10.2□□□□□ -0.78
CLIP1-209ENST00000537178 TTC24A2A3L6 582 aaPredicted RBP10.2□□□□□ -0.78
CLIP1-209ENST00000537178 UNC119BA6NIH7 251 aa10.2□□□□□ -0.78
CLIP1-209ENST00000537178 SOBPA7XYQ1 873 aa10.2□□□□□ -0.78
CLIP1-209ENST00000537178 PCDH17O14917 1159 aa10.2□□□□□ -0.78
CLIP1-209ENST00000537178 BRINP1O60477 761 aa10.2□□□□□ -0.78
CLIP1-209ENST00000537178 PRAMEF11O60813 436 aa10.2□□□□□ -0.78
CLIP1-209ENST00000537178 ACTL6BO94805 426 aa10.2□□□□□ -0.78
CLIP1-209ENST00000537178 JMJD7P0C870 316 aa10.2□□□□□ -0.78
CLIP1-209ENST00000537178 TYRP1P17643 537 aa10.2□□□□□ -0.78
CLIP1-209ENST00000537178 SFT2D3Q587I9 215 aa10.2□□□□□ -0.78
CLIP1-209ENST00000537178 MARVELD2Q8N4S9 558 aa10.2□□□□□ -0.78
CLIP1-209ENST00000537178 HOXB13Q92826 284 aaPredicted RBP10.2□□□□□ -0.78
CLIP1-209ENST00000537178 CAPNS2Q96L46 248 aa10.2□□□□□ -0.78
CLIP1-209ENST00000537178 MGLLQ99685 303 aa10.2□□□□□ -0.78
CLIP1-209ENST00000537178 SLC2A11Q9BYW1 496 aa10.2□□□□□ -0.78
CLIP1-209ENST00000537178 TTTY10Q9BZA0 68 aa10.2□□□□□ -0.78
CLIP1-209ENST00000537178 HRASLS2Q9NWW9 162 aa10.2□□□□□ -0.78
CLIP1-209ENST00000537178 PDE4DIPQ5VU43 2346 aa10.2□□□□□ -0.78
CLIP1-209ENST00000537178 A0A0U1RQF3 1178 aa10.2□□□□□ -0.78
CLIP1-209ENST00000537178 GLTPD2A6NH11 291 aa10.2□□□□□ -0.78
CLIP1-209ENST00000537178 C2orf74A8MZ97 194 aa10.2□□□□□ -0.78
CLIP1-209ENST00000537178 AK1P00568 194 aa10.2□□□□□ -0.78
CLIP1-209ENST00000537178 CHRNA1P02708 482 aa10.2□□□□□ -0.78
CLIP1-209ENST00000537178 ASGR2P07307 311 aa10.2□□□□□ -0.78
CLIP1-209ENST00000537178 IL7P13232 177 aa10.2□□□□□ -0.78
CLIP1-209ENST00000537178 GCGRP47871 477 aa10.2□□□□□ -0.78
CLIP1-209ENST00000537178 FPGSQ05932 587 aa10.2□□□□□ -0.78
CLIP1-209ENST00000537178 PRRT3Q5FWE3 981 aa10.2□□□□□ -0.78
CLIP1-209ENST00000537178 ATAD3CQ5T2N8 411 aa10.2□□□□□ -0.78
CLIP1-209ENST00000537178 SUSD1Q6UWL2 747 aa10.2□□□□□ -0.78
CLIP1-209ENST00000537178 ACBD7Q8N6N7 88 aa10.2□□□□□ -0.78
CLIP1-209ENST00000537178 OR51A7Q8NH64 312 aa10.2□□□□□ -0.78
CLIP1-209ENST00000537178 CHPT1Q8WUD6 406 aa10.2□□□□□ -0.78
CLIP1-209ENST00000537178 FAM46BQ96A09 425 aa10.2□□□□□ -0.78
CLIP1-209ENST00000537178 MMABQ96EY8 250 aaPredicted RBP10.2□□□□□ -0.78
CLIP1-209ENST00000537178 PLEKHA3Q9HB20 300 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms