RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 NPY2RP49146 381 aa4.52□□□□□ -1.69
PRKDC-208ENST00000536710 GPC3P51654 580 aa4.52□□□□□ -1.69
PRKDC-208ENST00000536710 ZNF131P52739 623 aa4.52□□□□□ -1.69
PRKDC-208ENST00000536710 MTTPP55157 894 aa4.52□□□□□ -1.69
PRKDC-208ENST00000536710 HTD2P86397 168 aa4.52□□□□□ -1.69
PRKDC-208ENST00000536710 GABPB1Q06547 395 aaPredicted RBP4.52□□□□□ -1.69
PRKDC-208ENST00000536710 SPP2Q13103 211 aa4.52□□□□□ -1.69
PRKDC-208ENST00000536710 CALCOCO2Q13137 446 aa4.52□□□□□ -1.69
PRKDC-208ENST00000536710 MS4A18Q3C1V0 323 aa4.52□□□□□ -1.69
PRKDC-208ENST00000536710 DNAJC21Q5F1R6 531 aaKnown RBP4.52□□□□□ -1.69
PRKDC-208ENST00000536710 TCHHL1Q5QJ38 904 aaPredicted RBP4.52□□□□□ -1.69
PRKDC-208ENST00000536710 C12orf60Q5U649 245 aa4.52□□□□□ -1.69
PRKDC-208ENST00000536710 TRIM65Q6PJ69 517 aa4.52□□□□□ -1.69
PRKDC-208ENST00000536710 OLFM4Q6UX06 510 aa4.52□□□□□ -1.69
PRKDC-208ENST00000536710 UNC5DQ6UXZ4 953 aa4.52□□□□□ -1.69
PRKDC-208ENST00000536710 SLC22A16Q86VW1 577 aa4.52□□□□□ -1.69
PRKDC-208ENST00000536710 ZFAND4Q86XD8 727 aa4.52□□□□□ -1.69
PRKDC-208ENST00000536710 RNF148Q8N7C7 305 aa4.52□□□□□ -1.69
PRKDC-208ENST00000536710 FBXO25Q8TCJ0 367 aa4.52□□□□□ -1.69
PRKDC-208ENST00000536710 C16orf45Q96MC5 204 aaPredicted RBP4.52□□□□□ -1.69
PRKDC-208ENST00000536710 OPRPNQ99935 248 aaPredicted RBP4.52□□□□□ -1.69
PRKDC-208ENST00000536710 FGFBP2Q9BYJ0 223 aa4.52□□□□□ -1.69
PRKDC-208ENST00000536710 NLNQ9BYT8 704 aa4.52□□□□□ -1.69
PRKDC-208ENST00000536710 DCTPP1Q9H773 170 aa4.52□□□□□ -1.69
PRKDC-208ENST00000536710 SP140LQ9H930 580 aa4.52□□□□□ -1.69
PRKDC-208ENST00000536710 TAS2R3Q9NYW6 316 aa4.52□□□□□ -1.69
PRKDC-208ENST00000536710 LHX3Q9UBR4 397 aa4.52□□□□□ -1.69
PRKDC-208ENST00000536710 NIP7Q9Y221 180 aaKnown RBP eCLIP4.52□□□□□ -1.69
PRKDC-208ENST00000536710 FGD5Q6ZNL6 1462 aa4.51□□□□□ -1.69
PRKDC-208ENST00000536710 IGHV3-38A0A0C4DH36 116 aa4.51□□□□□ -1.69
PRKDC-208ENST00000536710 IGLON5A6NGN9 336 aa4.51□□□□□ -1.69
PRKDC-208ENST00000536710 TRAFD1O14545 582 aaPredicted RBP4.51□□□□□ -1.69
PRKDC-208ENST00000536710 ADAM12O43184 909 aa4.51□□□□□ -1.69
PRKDC-208ENST00000536710 IDH3BO43837 385 aa4.51□□□□□ -1.69
PRKDC-208ENST00000536710 FCER2P06734 321 aa4.51□□□□□ -1.69
PRKDC-208ENST00000536710 ZNF10P21506 573 aaPredicted RBP4.51□□□□□ -1.69
PRKDC-208ENST00000536710 OXTRP30559 389 aa4.51□□□□□ -1.69
PRKDC-208ENST00000536710 HPDP32754 393 aaPredicted RBP4.51□□□□□ -1.69
PRKDC-208ENST00000536710 RIGQ13278 110 aa4.51□□□□□ -1.69
PRKDC-208ENST00000536710 SNX1Q13596 522 aa4.51□□□□□ -1.69
PRKDC-208ENST00000536710 FAM159AQ6UWV7 190 aa4.51□□□□□ -1.69
PRKDC-208ENST00000536710 BANPQ8N9N5 519 aa4.51□□□□□ -1.69
PRKDC-208ENST00000536710 P3H4Q92791 437 aa4.51□□□□□ -1.69
PRKDC-208ENST00000536710 MRPL38Q96DV4 380 aaKnown RBP4.51□□□□□ -1.69
PRKDC-208ENST00000536710 STRADBQ9C0K7 418 aa4.51□□□□□ -1.69
PRKDC-208ENST00000536710 DPH5Q9H2P9 285 aa4.51□□□□□ -1.69
PRKDC-208ENST00000536710 ROPN1Q9HAT0 212 aaPredicted RBP4.51□□□□□ -1.69
PRKDC-208ENST00000536710 ZDHHC18Q9NUE0 388 aa4.51□□□□□ -1.69
PRKDC-208ENST00000536710 BCAP29Q9UHQ4 241 aa4.51□□□□□ -1.69
PRKDC-208ENST00000536710 FAM205AQ6ZU69 1335 aa4.5□□□□□ -1.69
PRKDC-208ENST00000536710 MEX3AA1L020 520 aaKnown RBP4.5□□□□□ -1.69
PRKDC-208ENST00000536710 PDHXO00330 501 aa4.5□□□□□ -1.69
PRKDC-208ENST00000536710 ARPC1BO15143 372 aaKnown RBP4.5□□□□□ -1.69
PRKDC-208ENST00000536710 TSPAN2O60636 221 aa4.5□□□□□ -1.69
PRKDC-208ENST00000536710 SCGB2A1O75556 95 aa4.5□□□□□ -1.69
PRKDC-208ENST00000536710 GSTA1P08263 222 aa4.5□□□□□ -1.69
PRKDC-208ENST00000536710 UGT1A4P22310 534 aa4.5□□□□□ -1.69
PRKDC-208ENST00000536710 DNAJB1P25685 340 aa4.5□□□□□ -1.69
PRKDC-208ENST00000536710 CALML3P27482 149 aa4.5□□□□□ -1.69
PRKDC-208ENST00000536710 CCND2P30279 289 aa4.5□□□□□ -1.69
PRKDC-208ENST00000536710 PRDX2P32119 198 aa4.5□□□□□ -1.69
PRKDC-208ENST00000536710 MATKP42679 507 aa4.5□□□□□ -1.69
PRKDC-208ENST00000536710 MAGEA4P43358 317 aa4.5□□□□□ -1.69
PRKDC-208ENST00000536710 SLC1A6P48664 564 aa4.5□□□□□ -1.69
PRKDC-208ENST00000536710 IRX1P78414 480 aaPredicted RBP4.5□□□□□ -1.69
PRKDC-208ENST00000536710 FKBP3Q00688 224 aaKnown RBP4.5□□□□□ -1.69
PRKDC-208ENST00000536710 FASTKQ14296 549 aaKnown RBP4.5□□□□□ -1.69
PRKDC-208ENST00000536710 PDIA5Q14554 519 aa4.5□□□□□ -1.69
PRKDC-208ENST00000536710 ZNF146Q15072 292 aa4.5□□□□□ -1.69
PRKDC-208ENST00000536710 ADAM5Q6NVV9 412 aa4.5□□□□□ -1.69
PRKDC-208ENST00000536710 Q6ZTC4 211 aa4.5□□□□□ -1.69
PRKDC-208ENST00000536710 WDSUB1Q8N9V3 476 aa4.5□□□□□ -1.69
PRKDC-208ENST00000536710 Q8NBF4 154 aa4.5□□□□□ -1.69
PRKDC-208ENST00000536710 CHDHQ8NE62 594 aaPredicted RBP4.5□□□□□ -1.69
PRKDC-208ENST00000536710 OR1K1Q8NGR3 316 aa4.5□□□□□ -1.69
PRKDC-208ENST00000536710 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.5□□□□□ -1.69
PRKDC-208ENST00000536710 POM121L2Q96KW2 1035 aa4.5□□□□□ -1.69
PRKDC-208ENST00000536710 AGAP3Q96P47 875 aa4.5□□□□□ -1.69
PRKDC-208ENST00000536710 RCHY1Q96PM5 261 aa4.5□□□□□ -1.69
PRKDC-208ENST00000536710 SYT11Q9BT88 431 aa4.5□□□□□ -1.69
PRKDC-208ENST00000536710 MCRIP2Q9BUT9 160 aaKnown RBP4.5□□□□□ -1.69
PRKDC-208ENST00000536710 NMNAT2Q9BZQ4 307 aa4.5□□□□□ -1.69
PRKDC-208ENST00000536710 LIME1Q9H400 295 aa4.5□□□□□ -1.69
PRKDC-208ENST00000536710 FAM124BQ9H5Z6 455 aaPredicted RBP4.5□□□□□ -1.69
PRKDC-208ENST00000536710 YAE1D1Q9NRH1 226 aa4.5□□□□□ -1.69
PRKDC-208ENST00000536710 DEPPQ9NTK1 212 aa4.5□□□□□ -1.69
PRKDC-208ENST00000536710 SLC9A8Q9Y2E8 581 aa4.5□□□□□ -1.69
PRKDC-208ENST00000536710 ZNF175Q9Y473 711 aa4.5□□□□□ -1.69
PRKDC-208ENST00000536710 AUP1Q9Y679 476 aa4.5□□□□□ -1.69
PRKDC-208ENST00000536710 AFF2P51816 1311 aa4.49□□□□□ -1.69
PRKDC-208ENST00000536710 IGHV4-30-2A0A087WSY4 118 aa4.49□□□□□ -1.69
PRKDC-208ENST00000536710 TRGV8A0A0C4DH27 118 aa4.49□□□□□ -1.69
PRKDC-208ENST00000536710 ASB14A6NK59 587 aa4.49□□□□□ -1.69
PRKDC-208ENST00000536710 ZNF724A8MTY0 619 aa4.49□□□□□ -1.69
PRKDC-208ENST00000536710 K7ERI5 159 aa4.49□□□□□ -1.69
PRKDC-208ENST00000536710 LGALS8O00214 317 aa4.49□□□□□ -1.69
PRKDC-208ENST00000536710 IFNB1P01574 187 aa4.49□□□□□ -1.69
PRKDC-208ENST00000536710 FUT1P19526 365 aa4.49□□□□□ -1.69
PRKDC-208ENST00000536710 SLC6A8P48029 635 aa4.49□□□□□ -1.69
PRKDC-208ENST00000536710 NDST1P52848 882 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms