RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 SMC6Q96SB8 1091 aa4.97□□□□□ -1.61
CLIP1-207ENST00000536634 EDEM3Q9BZQ6 932 aa4.97□□□□□ -1.61
CLIP1-207ENST00000536634 DYRK4Q9NR20 520 aa4.97□□□□□ -1.61
CLIP1-207ENST00000536634 IL36AQ9UHA7 158 aa4.97□□□□□ -1.61
CLIP1-207ENST00000536634 VPS28Q9UK41 221 aa4.97□□□□□ -1.61
CLIP1-207ENST00000536634 APPL1Q9UKG1 709 aa4.97□□□□□ -1.61
CLIP1-207ENST00000536634 GPR34Q9UPC5 381 aa4.97□□□□□ -1.61
CLIP1-207ENST00000536634 MRPS18BQ9Y676 258 aaKnown RBP4.97□□□□□ -1.61
CLIP1-207ENST00000536634 A0A0D9SEW6 157 aa4.96□□□□□ -1.62
CLIP1-207ENST00000536634 IGHV5-10-1A0A0J9YXX1 117 aa4.96□□□□□ -1.62
CLIP1-207ENST00000536634 ZCWPW2A0A1B0GU75 182 aa4.96□□□□□ -1.62
CLIP1-207ENST00000536634 EFCAB7A8K855 629 aa4.96□□□□□ -1.62
CLIP1-207ENST00000536634 B4GAT1O43505 415 aa4.96□□□□□ -1.62
CLIP1-207ENST00000536634 HCRTR2O43614 444 aa4.96□□□□□ -1.62
CLIP1-207ENST00000536634 KLRC4O43908 158 aa4.96□□□□□ -1.62
CLIP1-207ENST00000536634 LDLRP01130 860 aa4.96□□□□□ -1.62
CLIP1-207ENST00000536634 F8A1P23610 371 aa4.96□□□□□ -1.62
CLIP1-207ENST00000536634 THOP1P52888 689 aa4.96□□□□□ -1.62
CLIP1-207ENST00000536634 OR1D5P58170 312 aa4.96□□□□□ -1.62
CLIP1-207ENST00000536634 EEF1A1P68104 462 aaKnown RBP4.96□□□□□ -1.62
CLIP1-207ENST00000536634 RPL24P83731 157 aaKnown RBP4.96□□□□□ -1.62
CLIP1-207ENST00000536634 PPARDQ03181 441 aa4.96□□□□□ -1.62
CLIP1-207ENST00000536634 NIPAL4Q0D2K0 466 aa4.96□□□□□ -1.62
CLIP1-207ENST00000536634 SGCGQ13326 291 aa4.96□□□□□ -1.62
CLIP1-207ENST00000536634 EIF4EBP2Q13542 120 aaPredicted RBP4.96□□□□□ -1.62
CLIP1-207ENST00000536634 KRTAP21-3Q3LHN1 58 aa4.96□□□□□ -1.62
CLIP1-207ENST00000536634 LRRC73Q5JTD7 316 aa4.96□□□□□ -1.62
CLIP1-207ENST00000536634 OTUD3Q5T2D3 398 aaPredicted RBP4.96□□□□□ -1.62
CLIP1-207ENST00000536634 EEF1A1P5Q5VTE0 462 aa4.96□□□□□ -1.62
CLIP1-207ENST00000536634 CCDC70Q6NSX1 233 aa4.96□□□□□ -1.62
CLIP1-207ENST00000536634 FBXL22Q6P050 247 aa4.96□□□□□ -1.62
CLIP1-207ENST00000536634 C22orf39Q6P5X5 142 aa4.96□□□□□ -1.62
CLIP1-207ENST00000536634 ZNF449Q6P9G9 518 aa4.96□□□□□ -1.62
CLIP1-207ENST00000536634 TIPARPQ7Z3E1 657 aaKnown RBP4.96□□□□□ -1.62
CLIP1-207ENST00000536634 TMEM135Q86UB9 458 aa4.96□□□□□ -1.62
CLIP1-207ENST00000536634 ARHGAP12Q8IWW6 846 aa4.96□□□□□ -1.62
CLIP1-207ENST00000536634 METTL27Q8N6F8 245 aaPredicted RBP4.96□□□□□ -1.62
CLIP1-207ENST00000536634 GOLGA5Q8TBA6 731 aa4.96□□□□□ -1.62
CLIP1-207ENST00000536634 PDCD6IPQ8WUM4 868 aaKnown RBP4.96□□□□□ -1.62
CLIP1-207ENST00000536634 STARD8Q92502 1023 aa4.96□□□□□ -1.62
CLIP1-207ENST00000536634 ART4Q93070 314 aa4.96□□□□□ -1.62
CLIP1-207ENST00000536634 LINGO1Q96FE5 620 aa4.96□□□□□ -1.62
CLIP1-207ENST00000536634 PDXPQ96GD0 296 aa4.96□□□□□ -1.62
CLIP1-207ENST00000536634 BTN2A3PQ96KV6 586 aa4.96□□□□□ -1.62
CLIP1-207ENST00000536634 RPRD1AQ96P16 312 aaPredicted RBP4.96□□□□□ -1.62
CLIP1-207ENST00000536634 USP28Q96RU2 1077 aa4.96□□□□□ -1.62
CLIP1-207ENST00000536634 NEURL2Q9BR09 285 aa4.96□□□□□ -1.62
CLIP1-207ENST00000536634 MIS12Q9H081 205 aa4.96□□□□□ -1.62
CLIP1-207ENST00000536634 ZSCAN16Q9H4T2 348 aaPredicted RBP4.96□□□□□ -1.62
CLIP1-207ENST00000536634 CWC15Q9P013 229 aaKnown RBP4.96□□□□□ -1.62
CLIP1-207ENST00000536634 TMEM9Q9P0T7 183 aa4.96□□□□□ -1.62
CLIP1-207ENST00000536634 KLHL9Q9P2J3 617 aa4.96□□□□□ -1.62
CLIP1-207ENST00000536634 AASSQ9UDR5 926 aa4.96□□□□□ -1.62
CLIP1-207ENST00000536634 ERRFI1Q9UJM3 462 aaPredicted RBP4.96□□□□□ -1.62
CLIP1-207ENST00000536634 PILRAQ9UKJ1 303 aa4.96□□□□□ -1.62
CLIP1-207ENST00000536634 VANGL2Q9ULK5 521 aa4.96□□□□□ -1.62
CLIP1-207ENST00000536634 FAF1Q9UNN5 650 aaPredicted RBP4.96□□□□□ -1.62
CLIP1-207ENST00000536634 R3HDM2Q9Y2K5 976 aaKnown RBP4.96□□□□□ -1.62
CLIP1-207ENST00000536634 DOCK4Q8N1I0 1966 aa4.96□□□□□ -1.62
CLIP1-207ENST00000536634 SYNJ2BP-COX16A0A087WUM0 186 aa4.95□□□□□ -1.62
CLIP1-207ENST00000536634 TCP11X1B4DZS4 312 aa4.95□□□□□ -1.62
CLIP1-207ENST00000536634 M0QYV0 167 aa4.95□□□□□ -1.62
CLIP1-207ENST00000536634 DVL1O14640 695 aa4.95□□□□□ -1.62
CLIP1-207ENST00000536634 SORBS2O94875 1100 aaKnown RBP4.95□□□□□ -1.62
CLIP1-207ENST00000536634 GAS8-AS1O95177 125 aa4.95□□□□□ -1.62
CLIP1-207ENST00000536634 TRUB2O95900 331 aaKnown RBP4.95□□□□□ -1.62
CLIP1-207ENST00000536634 APOEP02649 317 aa4.95□□□□□ -1.62
CLIP1-207ENST00000536634 EIF2S1P05198 315 aaKnown RBP4.95□□□□□ -1.62
CLIP1-207ENST00000536634 ALPIP09923 528 aa4.95□□□□□ -1.62
CLIP1-207ENST00000536634 CFC1BP0CG36 223 aa4.95□□□□□ -1.62
CLIP1-207ENST00000536634 CFC1P0CG37 223 aa4.95□□□□□ -1.62
CLIP1-207ENST00000536634 CTSEP14091 401 aa4.95□□□□□ -1.62
CLIP1-207ENST00000536634 GLIPR1P48060 266 aa4.95□□□□□ -1.62
CLIP1-207ENST00000536634 CCNHP51946 323 aaPredicted RBP4.95□□□□□ -1.62
CLIP1-207ENST00000536634 DVL1P1P54792 670 aaPredicted RBP4.95□□□□□ -1.62
CLIP1-207ENST00000536634 MAZP56270 477 aaKnown RBP4.95□□□□□ -1.62
CLIP1-207ENST00000536634 TAS2R40P59535 323 aa4.95□□□□□ -1.62
CLIP1-207ENST00000536634 NUCB2P80303 420 aa4.95□□□□□ -1.62
CLIP1-207ENST00000536634 PLIN5Q00G26 463 aa4.95□□□□□ -1.62
CLIP1-207ENST00000536634 CUL2Q13617 745 aa4.95□□□□□ -1.62
CLIP1-207ENST00000536634 RBM39Q14498 530 aaKnown RBP4.95□□□□□ -1.62
CLIP1-207ENST00000536634 IRF4Q15306 451 aa4.95□□□□□ -1.62
CLIP1-207ENST00000536634 ELOCQ15369 112 aa4.95□□□□□ -1.62
CLIP1-207ENST00000536634 MYLK3Q32MK0 819 aa4.95□□□□□ -1.62
CLIP1-207ENST00000536634 NADK2Q4G0N4 442 aa4.95□□□□□ -1.62
CLIP1-207ENST00000536634 CBWD6Q4V339 395 aa4.95□□□□□ -1.62
CLIP1-207ENST00000536634 C14orf28Q4W4Y0 310 aa4.95□□□□□ -1.62
CLIP1-207ENST00000536634 CBWD3Q5JTY5 395 aa4.95□□□□□ -1.62
CLIP1-207ENST00000536634 RABGAP1LQ5R372 815 aa4.95□□□□□ -1.62
CLIP1-207ENST00000536634 PDSS1Q5T2R2 415 aa4.95□□□□□ -1.62
CLIP1-207ENST00000536634 LCLAT1Q6UWP7 414 aa4.95□□□□□ -1.62
CLIP1-207ENST00000536634 ENPP7Q6UWV6 458 aa4.95□□□□□ -1.62
CLIP1-207ENST00000536634 GSG1LQ6UXU4 331 aa4.95□□□□□ -1.62
CLIP1-207ENST00000536634 PXKQ7Z7A4 578 aa4.95□□□□□ -1.62
CLIP1-207ENST00000536634 OR6C4Q8NGE1 309 aa4.95□□□□□ -1.62
CLIP1-207ENST00000536634 OR6K2Q8NGY2 324 aa4.95□□□□□ -1.62
CLIP1-207ENST00000536634 CCL4L1Q8NHW4 92 aa4.95□□□□□ -1.62
CLIP1-207ENST00000536634 HM13Q8TCT9 377 aa4.95□□□□□ -1.62
CLIP1-207ENST00000536634 PPP1R16AQ96I34 528 aa4.95□□□□□ -1.62
CLIP1-207ENST00000536634 CCDC114Q96M63 670 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms