RNA–Protein interactions for RNA: ENST00000536255.6

RPAIN-205, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-205ENST00000536255 SCN2AQ99250 2005 aa12.63□□□□□ -0.39
RPAIN-205ENST00000536255 ATP6AP2A0A1C7CYW4 349 aa12.63□□□□□ -0.39
RPAIN-205ENST00000536255 TGFBR3LH3BV60 316 aa12.63□□□□□ -0.39
RPAIN-205ENST00000536255 HDAC3O15379 428 aa12.63□□□□□ -0.39
RPAIN-205ENST00000536255 ATP6AP2O75787 350 aa12.63□□□□□ -0.39
RPAIN-205ENST00000536255 SLC35E2P0CK97 266 aa12.63□□□□□ -0.39
RPAIN-205ENST00000536255 DDX5P17844 614 aaKnown RBP12.63□□□□□ -0.39
RPAIN-205ENST00000536255 DDCP20711 480 aa12.63□□□□□ -0.39
RPAIN-205ENST00000536255 GALNSP34059 522 aa12.63□□□□□ -0.39
RPAIN-205ENST00000536255 ASMTP46597 345 aa12.63□□□□□ -0.39
RPAIN-205ENST00000536255 XKP51811 444 aa12.63□□□□□ -0.39
RPAIN-205ENST00000536255 IGFBP7Q16270 282 aa12.63□□□□□ -0.39
RPAIN-205ENST00000536255 PLEKHN1Q494U1 663 aaPredicted RBP12.63□□□□□ -0.39
RPAIN-205ENST00000536255 RFTN2Q52LD8 501 aaPredicted RBP12.63□□□□□ -0.39
RPAIN-205ENST00000536255 C6orf163Q5TEZ5 329 aa12.63□□□□□ -0.39
RPAIN-205ENST00000536255 LRRC34Q8IZ02 419 aa12.63□□□□□ -0.39
RPAIN-205ENST00000536255 FNDC5Q8NAU1 212 aa12.63□□□□□ -0.39
RPAIN-205ENST00000536255 MORN4Q8NDC4 146 aa12.63□□□□□ -0.39
RPAIN-205ENST00000536255 PIWIL2Q8TC59 973 aaKnown RBP12.63□□□□□ -0.39
RPAIN-205ENST00000536255 KLHL29Q96CT2 875 aa12.63□□□□□ -0.39
RPAIN-205ENST00000536255 FCRL1Q96LA6 429 aa12.63□□□□□ -0.39
RPAIN-205ENST00000536255 C3orf30Q96M34 536 aa12.63□□□□□ -0.39
RPAIN-205ENST00000536255 MAGEB18Q96M61 343 aa12.63□□□□□ -0.39
RPAIN-205ENST00000536255 C7orf26Q96N11 449 aa12.63□□□□□ -0.39
RPAIN-205ENST00000536255 LMF1Q96S06 567 aa12.63□□□□□ -0.39
RPAIN-205ENST00000536255 NUF2Q9BZD4 464 aa12.63□□□□□ -0.39
RPAIN-205ENST00000536255 MEAF6Q9HAF1 191 aa12.63□□□□□ -0.39
RPAIN-205ENST00000536255 MIEF1Q9NQG6 463 aa12.63□□□□□ -0.39
RPAIN-205ENST00000536255 COPS7AQ9UBW8 275 aa12.63□□□□□ -0.39
RPAIN-205ENST00000536255 UTS2RQ9UKP6 389 aa12.63□□□□□ -0.39
RPAIN-205ENST00000536255 EIF3LQ9Y262 564 aaKnown RBP12.63□□□□□ -0.39
RPAIN-205ENST00000536255 CSAG2Q9Y5P2 127 aa12.63□□□□□ -0.39
RPAIN-205ENST00000536255 ZNF780BQ9Y6R6 833 aa12.63□□□□□ -0.39
RPAIN-205ENST00000536255 TENM4Q6N022 2769 aa12.62□□□□□ -0.39
RPAIN-205ENST00000536255 C17orf105B2RV13 164 aa12.62□□□□□ -0.39
RPAIN-205ENST00000536255 ERAL1O75616 437 aaKnown RBP12.62□□□□□ -0.39
RPAIN-205ENST00000536255 KITP10721 976 aa12.62□□□□□ -0.39
RPAIN-205ENST00000536255 PRPS2P11908 318 aa12.62□□□□□ -0.39
RPAIN-205ENST00000536255 PORP16435 677 aaPredicted RBP12.62□□□□□ -0.39
RPAIN-205ENST00000536255 PCSK2P16519 638 aa12.62□□□□□ -0.39
RPAIN-205ENST00000536255 CSNK2A2P19784 350 aaPredicted RBP12.62□□□□□ -0.39
RPAIN-205ENST00000536255 CLCN2P51788 898 aa12.62□□□□□ -0.39
RPAIN-205ENST00000536255 C2orf80Q0P641 193 aa12.62□□□□□ -0.39
RPAIN-205ENST00000536255 INPP5JQ15735 1006 aaPredicted RBP12.62□□□□□ -0.39
RPAIN-205ENST00000536255 C6orf136Q5SQH8 315 aa12.62□□□□□ -0.39
RPAIN-205ENST00000536255 B3GNTL1Q67FW5 361 aaPredicted RBP12.62□□□□□ -0.39
RPAIN-205ENST00000536255 FAM71E1Q6IPT2 247 aa12.62□□□□□ -0.39
RPAIN-205ENST00000536255 FAM9CQ8IZT9 166 aa12.62□□□□□ -0.39
RPAIN-205ENST00000536255 SLC5A8Q8N695 610 aa12.62□□□□□ -0.39
RPAIN-205ENST00000536255 CPT1CQ8TCG5 803 aa12.62□□□□□ -0.39
RPAIN-205ENST00000536255 CKAP2Q8WWK9 683 aa12.62□□□□□ -0.39
RPAIN-205ENST00000536255 MIB2Q96AX9 1013 aa12.62□□□□□ -0.39
RPAIN-205ENST00000536255 VMP1Q96GC9 406 aa12.62□□□□□ -0.39
RPAIN-205ENST00000536255 PPP1R36Q96LQ0 422 aa12.62□□□□□ -0.39
RPAIN-205ENST00000536255 KCNK13Q9HB14 408 aa12.62□□□□□ -0.39
RPAIN-205ENST00000536255 NOP53Q9NZM5 478 aaKnown RBP12.62□□□□□ -0.39
RPAIN-205ENST00000536255 HEY2Q9UBP5 337 aa12.62□□□□□ -0.39
RPAIN-205ENST00000536255 MARCOQ9UEW3 520 aaPredicted RBP12.62□□□□□ -0.39
RPAIN-205ENST00000536255 CES1P1Q9UKY3 287 aa12.62□□□□□ -0.39
RPAIN-205ENST00000536255 PPIEQ9UNP9 301 aaKnown RBP12.62□□□□□ -0.39
RPAIN-205ENST00000536255 ENTPD4Q9Y227 616 aa12.62□□□□□ -0.39
RPAIN-205ENST00000536255 DOCK10Q96BY6 2186 aa12.62□□□□□ -0.39
RPAIN-205ENST00000536255 MYOCOSA0A1B0GUC4 107 aa12.61□□□□□ -0.39
RPAIN-205ENST00000536255 DYTNA2CJ06 578 aa12.61□□□□□ -0.39
RPAIN-205ENST00000536255 JUNP05412 331 aaKnown RBP12.61□□□□□ -0.39
RPAIN-205ENST00000536255 BCKDHAP12694 445 aa12.61□□□□□ -0.39
RPAIN-205ENST00000536255 CPMP14384 443 aa12.61□□□□□ -0.39
RPAIN-205ENST00000536255 SDC1P18827 310 aa12.61□□□□□ -0.39
RPAIN-205ENST00000536255 RPL3P39023 403 aaKnown RBP12.61□□□□□ -0.39
RPAIN-205ENST00000536255 ERVK-8P63133 956 aa12.61□□□□□ -0.39
RPAIN-205ENST00000536255 ARG2P78540 354 aa12.61□□□□□ -0.39
RPAIN-205ENST00000536255 KCNC4Q03721 635 aa12.61□□□□□ -0.39
RPAIN-205ENST00000536255 EMX2Q04743 252 aa12.61□□□□□ -0.39
RPAIN-205ENST00000536255 TLR1Q15399 786 aa12.61□□□□□ -0.39
RPAIN-205ENST00000536255 SPRED3Q2MJR0 410 aa12.61□□□□□ -0.39
RPAIN-205ENST00000536255 PRR30Q53SZ7 412 aaPredicted RBP12.61□□□□□ -0.39
RPAIN-205ENST00000536255 ABHD17BQ5VST6 288 aa12.61□□□□□ -0.39
RPAIN-205ENST00000536255 H3F3CQ6NXT2 135 aa12.61□□□□□ -0.39
RPAIN-205ENST00000536255 RGS9BPQ6ZS82 235 aa12.61□□□□□ -0.39
RPAIN-205ENST00000536255 R3HCC1LQ7Z5L2 792 aaKnown RBP12.61□□□□□ -0.39
RPAIN-205ENST00000536255 WDR75Q8IWA0 830 aaKnown RBP12.61□□□□□ -0.39
RPAIN-205ENST00000536255 MMP21Q8N119 569 aa12.61□□□□□ -0.39
RPAIN-205ENST00000536255 LRRC25Q8N386 305 aaPredicted RBP12.61□□□□□ -0.39
RPAIN-205ENST00000536255 NFAM1Q8NET5 270 aaPredicted RBP12.61□□□□□ -0.39
RPAIN-205ENST00000536255 OR1N1Q8NGS0 311 aa12.61□□□□□ -0.39
RPAIN-205ENST00000536255 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.61□□□□□ -0.392e-65■■■■■ 53.9
RPAIN-205ENST00000536255 ELP5Q8TE02 316 aa12.61□□□□□ -0.39
RPAIN-205ENST00000536255 PTPMT1Q8WUK0 201 aaPredicted RBP12.61□□□□□ -0.39
RPAIN-205ENST00000536255 RIT1Q92963 219 aa12.61□□□□□ -0.39
RPAIN-205ENST00000536255 NCLNQ969V3 563 aa12.61□□□□□ -0.39
RPAIN-205ENST00000536255 TSSK3Q96PN8 268 aa12.61□□□□□ -0.39
RPAIN-205ENST00000536255 OR8D2Q9GZM6 311 aa12.61□□□□□ -0.39
RPAIN-205ENST00000536255 AKTIPQ9H8T0 292 aa12.61□□□□□ -0.39
RPAIN-205ENST00000536255 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.61□□□□□ -0.39
RPAIN-205ENST00000536255 ABI3Q9P2A4 366 aa12.61□□□□□ -0.39
RPAIN-205ENST00000536255 MAPRE3Q9UPY8 281 aa12.61□□□□□ -0.39
RPAIN-205ENST00000536255 PCDHGA10Q9Y5H3 936 aa12.61□□□□□ -0.39
RPAIN-205ENST00000536255 UBR5O95071 2799 aaPredicted RBP12.61□□□□□ -0.39
RPAIN-205ENST00000536255 WASHC1A8K0Z3 465 aa12.6□□□□□ -0.39
RPAIN-205ENST00000536255 A8MUI8 341 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms