RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 ADH5P11766 374 aa17.07■□□□□ 0.32
RAB40C-203ENST00000535977 ZNF8P17098 575 aaPredicted RBP17.07■□□□□ 0.32
RAB40C-203ENST00000535977 ITGB7P26010 798 aa17.07■□□□□ 0.32
RAB40C-203ENST00000535977 RGS6P49758 472 aa17.07■□□□□ 0.32
RAB40C-203ENST00000535977 DPTQ07507 201 aa17.07■□□□□ 0.32
RAB40C-203ENST00000535977 SF1Q15637 639 aaKnown RBP17.07■□□□□ 0.32
RAB40C-203ENST00000535977 TIGD3Q6B0B8 471 aa17.07■□□□□ 0.32
RAB40C-203ENST00000535977 NXPE4Q6UWF7 544 aa17.07■□□□□ 0.32
RAB40C-203ENST00000535977 IKBIPQ70UQ0 350 aa17.07■□□□□ 0.32
RAB40C-203ENST00000535977 COMMD6Q7Z4G1 85 aa17.07■□□□□ 0.32
RAB40C-203ENST00000535977 CDH24Q86UP0 819 aa17.07■□□□□ 0.32
RAB40C-203ENST00000535977 PPCDCQ96CD2 204 aa17.07■□□□□ 0.32
RAB40C-203ENST00000535977 CFL2Q9Y281 166 aa17.07■□□□□ 0.32
RAB40C-203ENST00000535977 CIB4A0PJX0 185 aa17.06■□□□□ 0.32
RAB40C-203ENST00000535977 LILRB5O75023 590 aa17.06■□□□□ 0.32
RAB40C-203ENST00000535977 ADH1CP00326 375 aa17.06■□□□□ 0.32
RAB40C-203ENST00000535977 C1QCP02747 245 aa17.06■□□□□ 0.32
RAB40C-203ENST00000535977 HSMCR30P0CW71 290 aa17.06■□□□□ 0.32
RAB40C-203ENST00000535977 ANXA8P13928 327 aa17.06■□□□□ 0.32
RAB40C-203ENST00000535977 HLA-DMAP28067 261 aa17.06■□□□□ 0.32
RAB40C-203ENST00000535977 CRATP43155 626 aa17.06■□□□□ 0.32
RAB40C-203ENST00000535977 GAB1Q13480 694 aa17.06■□□□□ 0.32
RAB40C-203ENST00000535977 IFI44LQ53G44 452 aa17.06■□□□□ 0.32
RAB40C-203ENST00000535977 NDUFAF5Q5TEU4 345 aa17.06■□□□□ 0.32
RAB40C-203ENST00000535977 ENTHD1Q8IYW4 607 aa17.06■□□□□ 0.32
RAB40C-203ENST00000535977 CELF5Q8N6W0 485 aaKnown RBP17.06■□□□□ 0.32
RAB40C-203ENST00000535977 NUS1Q96E22 293 aa17.06■□□□□ 0.32
RAB40C-203ENST00000535977 PPP1R16AQ96I34 528 aa17.06■□□□□ 0.32
RAB40C-203ENST00000535977 SRRQ9GZT4 340 aa17.06■□□□□ 0.32
RAB40C-203ENST00000535977 NUP214P35658 2090 aaPredicted RBP17.06■□□□□ 0.32
RAB40C-203ENST00000535977 PIPSLA2A3N6 862 aa17.06■□□□□ 0.32
RAB40C-203ENST00000535977 VEGFDO43915 354 aa17.06■□□□□ 0.32
RAB40C-203ENST00000535977 TNFRSF21O75509 655 aa17.06■□□□□ 0.32
RAB40C-203ENST00000535977 FURINP09958 794 aa17.06■□□□□ 0.32
RAB40C-203ENST00000535977 DDCP20711 480 aa17.06■□□□□ 0.32
RAB40C-203ENST00000535977 IRS1P35568 1242 aa17.06■□□□□ 0.32
RAB40C-203ENST00000535977 CYP4F2P78329 520 aa17.06■□□□□ 0.32
RAB40C-203ENST00000535977 SCN1BQ07699 218 aa17.06■□□□□ 0.32
RAB40C-203ENST00000535977 MLIPQ5VWP3 458 aa17.06■□□□□ 0.32
RAB40C-203ENST00000535977 GALNT10Q86SR1 603 aa17.06■□□□□ 0.32
RAB40C-203ENST00000535977 TRAPPC5Q8IUR0 188 aa17.06■□□□□ 0.32
RAB40C-203ENST00000535977 SLC5A11Q8WWX8 675 aa17.06■□□□□ 0.32
RAB40C-203ENST00000535977 FOXJ1Q92949 421 aa17.06■□□□□ 0.32
RAB40C-203ENST00000535977 EXO1Q9UQ84 846 aaKnown RBP17.06■□□□□ 0.32
RAB40C-203ENST00000535977 A0A075B6Q4 140 aa17.05■□□□□ 0.32
RAB40C-203ENST00000535977 TNFRSF11BO00300 401 aa17.05■□□□□ 0.32
RAB40C-203ENST00000535977 NUDT7P0C024 238 aa17.05■□□□□ 0.32
RAB40C-203ENST00000535977 TNNI3P19429 210 aa17.05■□□□□ 0.32
RAB40C-203ENST00000535977 GPR1P46091 355 aa17.05■□□□□ 0.32
RAB40C-203ENST00000535977 SRP54P61011 504 aaKnown RBP17.05■□□□□ 0.32
RAB40C-203ENST00000535977 ALDH6A1Q02252 535 aaKnown RBP17.05■□□□□ 0.32
RAB40C-203ENST00000535977 TEKQ02763 1124 aa17.05■□□□□ 0.32
RAB40C-203ENST00000535977 ASAH1Q13510 395 aa17.05■□□□□ 0.32
RAB40C-203ENST00000535977 ZNF630Q2M218 657 aaPredicted RBP17.05■□□□□ 0.32
RAB40C-203ENST00000535977 FAM71E1Q6IPT2 247 aa17.05■□□□□ 0.32
RAB40C-203ENST00000535977 C16orf78Q8WTQ4 265 aa17.05■□□□□ 0.32
RAB40C-203ENST00000535977 GIMAP1Q8WWP7 306 aa17.05■□□□□ 0.32
RAB40C-203ENST00000535977 OR8D1Q8WZ84 308 aa17.05■□□□□ 0.32
RAB40C-203ENST00000535977 SLC35A5Q9BS91 424 aa17.05■□□□□ 0.32
RAB40C-203ENST00000535977 WRAP53Q9BUR4 548 aaKnown RBP17.05■□□□□ 0.32
RAB40C-203ENST00000535977 MTG2Q9H4K7 406 aa17.05■□□□□ 0.32
RAB40C-203ENST00000535977 ERVMER34-1Q9H9K5 563 aa17.05■□□□□ 0.32
RAB40C-203ENST00000535977 PLCXD1Q9NUJ7 323 aa17.05■□□□□ 0.32
RAB40C-203ENST00000535977 GULP1Q9UBP9 304 aa17.05■□□□□ 0.32
RAB40C-203ENST00000535977 DOCK6Q96HP0 2047 aa17.05■□□□□ 0.32
RAB40C-203ENST00000535977 SLC22A5O76082 557 aa17.05■□□□□ 0.32
RAB40C-203ENST00000535977 KIR2DL3P43628 341 aa17.05■□□□□ 0.32
RAB40C-203ENST00000535977 CRYBA2P53672 197 aa17.05■□□□□ 0.32
RAB40C-203ENST00000535977 HBA1P69905 142 aa17.05■□□□□ 0.32
RAB40C-203ENST00000535977 C2orf80Q0P641 193 aa17.05■□□□□ 0.32
RAB40C-203ENST00000535977 ZBTB37Q5TC79 503 aa17.05■□□□□ 0.32
RAB40C-203ENST00000535977 TMPRSS11AQ6ZMR5 421 aa17.05■□□□□ 0.32
RAB40C-203ENST00000535977 P3H2Q8IVL5 708 aa17.05■□□□□ 0.32
RAB40C-203ENST00000535977 NLGN4YQ8NFZ3 816 aaPredicted RBP17.05■□□□□ 0.32
RAB40C-203ENST00000535977 SPPL2AQ8TCT8 520 aa17.05■□□□□ 0.32
RAB40C-203ENST00000535977 GTPBP2Q9BX10 602 aaKnown RBP17.05■□□□□ 0.32
RAB40C-203ENST00000535977 OR2AG1Q9H205 316 aa17.05■□□□□ 0.32
RAB40C-203ENST00000535977 C11orf49Q9H6J7 331 aa17.05■□□□□ 0.32
RAB40C-203ENST00000535977 C3orf14Q9HBI5 128 aa17.05■□□□□ 0.32
RAB40C-203ENST00000535977 THSD1Q9NS62 852 aa17.05■□□□□ 0.32
RAB40C-203ENST00000535977 AHSPQ9NZD4 102 aa17.05■□□□□ 0.32
RAB40C-203ENST00000535977 PSORS1C1Q9UIG5 152 aa17.05■□□□□ 0.32
RAB40C-203ENST00000535977 AUP1Q9Y679 476 aa17.05■□□□□ 0.32
RAB40C-203ENST00000535977 SOD1P00441 154 aa17.05■□□□□ 0.32
RAB40C-203ENST00000535977 PTHP01270 115 aa17.05■□□□□ 0.32
RAB40C-203ENST00000535977 CYP17A1P05093 508 aa17.05■□□□□ 0.32
RAB40C-203ENST00000535977 POU2F2P09086 479 aa17.05■□□□□ 0.32
RAB40C-203ENST00000535977 CD72P21854 359 aa17.05■□□□□ 0.32
RAB40C-203ENST00000535977 MVDP53602 400 aa17.05■□□□□ 0.32
RAB40C-203ENST00000535977 DSTNP60981 165 aa17.05■□□□□ 0.32
RAB40C-203ENST00000535977 TAP2Q03519 686 aa17.05■□□□□ 0.32
RAB40C-203ENST00000535977 DBPQ10586 325 aaPredicted RBP17.05■□□□□ 0.32
RAB40C-203ENST00000535977 POM121L1PQ3SYA9 428 aa17.05■□□□□ 0.32
RAB40C-203ENST00000535977 LAX1Q8IWV1 398 aa17.05■□□□□ 0.32
RAB40C-203ENST00000535977 KRT78Q8N1N4 520 aa17.05■□□□□ 0.32
RAB40C-203ENST00000535977 VN1R2Q8NFZ6 395 aa17.05■□□□□ 0.32
RAB40C-203ENST00000535977 OR2L2Q8NH16 312 aa17.05■□□□□ 0.32
RAB40C-203ENST00000535977 ZSWIM3Q96MP5 696 aa17.05■□□□□ 0.32
RAB40C-203ENST00000535977 NDUFAF4Q9P032 175 aa17.05■□□□□ 0.32
RAB40C-203ENST00000535977 DPP7Q9UHL4 492 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms