RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 CLPSP04118 112 aa10.3□□□□□ -0.76
CLSTN3-206ENST00000535668 RFPL3SP0C7P2 107 aa10.3□□□□□ -0.76
CLSTN3-206ENST00000535668 ALOX15P16050 662 aaPredicted RBP10.3□□□□□ -0.76
CLSTN3-206ENST00000535668 PTX3P26022 381 aaPredicted RBP10.3□□□□□ -0.76
CLSTN3-206ENST00000535668 TLX1P31314 330 aaPredicted RBP10.3□□□□□ -0.76
CLSTN3-206ENST00000535668 KIR2DL3P43628 341 aa10.3□□□□□ -0.76
CLSTN3-206ENST00000535668 HSPA7P48741 367 aa10.3□□□□□ -0.76
CLSTN3-206ENST00000535668 ASCL1P50553 236 aa10.3□□□□□ -0.76
CLSTN3-206ENST00000535668 SLC12A2P55011 1212 aa10.3□□□□□ -0.76
CLSTN3-206ENST00000535668 RAB10P61026 200 aa10.3□□□□□ -0.76
CLSTN3-206ENST00000535668 FUT7Q11130 342 aa10.3□□□□□ -0.76
CLSTN3-206ENST00000535668 MYBPHQ13203 477 aa10.3□□□□□ -0.76
CLSTN3-206ENST00000535668 ACSF3Q4G176 576 aaPredicted RBP10.3□□□□□ -0.76
CLSTN3-206ENST00000535668 FLYWCH1Q4VC44 716 aa10.3□□□□□ -0.76
CLSTN3-206ENST00000535668 FNDC7Q5VTL7 733 aa10.3□□□□□ -0.76
CLSTN3-206ENST00000535668 NSUN5P2Q63ZY6 315 aa10.3□□□□□ -0.76
CLSTN3-206ENST00000535668 ZNF585AQ6P3V2 769 aa10.3□□□□□ -0.76
CLSTN3-206ENST00000535668 PM20D2Q8IYS1 436 aa10.3□□□□□ -0.76
CLSTN3-206ENST00000535668 L3MBTL4Q8NA19 623 aa10.3□□□□□ -0.76
CLSTN3-206ENST00000535668 RELL2Q8NC24 303 aaPredicted RBP10.3□□□□□ -0.76
CLSTN3-206ENST00000535668 MBD3L2Q8NHZ7 208 aaPredicted RBP10.3□□□□□ -0.76
CLSTN3-206ENST00000535668 CCT6BQ92526 530 aa10.3□□□□□ -0.76
CLSTN3-206ENST00000535668 LRRC46Q96FV0 321 aa10.3□□□□□ -0.76
CLSTN3-206ENST00000535668 TIMP4Q99727 224 aa10.3□□□□□ -0.76
CLSTN3-206ENST00000535668 ANGPTL4Q9BY76 406 aa10.3□□□□□ -0.76
CLSTN3-206ENST00000535668 WWTR1Q9GZV5 400 aa10.3□□□□□ -0.76
CLSTN3-206ENST00000535668 CLEC4MQ9H2X3 399 aaPredicted RBP10.3□□□□□ -0.76
CLSTN3-206ENST00000535668 CALHM2Q9HA72 323 aa10.3□□□□□ -0.76
CLSTN3-206ENST00000535668 NMRAL1Q9HBL8 299 aa10.3□□□□□ -0.76
CLSTN3-206ENST00000535668 PCDHGA11Q9Y5H2 935 aa10.3□□□□□ -0.76
CLSTN3-206ENST00000535668 COL6A5A8TX70 2615 aa10.3□□□□□ -0.76
CLSTN3-206ENST00000535668 DNHD1Q96M86 4753 aa10.29□□□□□ -0.76
CLSTN3-206ENST00000535668 ZANQ9Y493 2812 aa10.29□□□□□ -0.76
CLSTN3-206ENST00000535668 A0A0A6YYD5 115 aa10.29□□□□□ -0.76
CLSTN3-206ENST00000535668 ATP6AP2A0A1C7CYW4 349 aa10.29□□□□□ -0.76
CLSTN3-206ENST00000535668 CAPN14A8MX76 684 aa10.29□□□□□ -0.76
CLSTN3-206ENST00000535668 PLPP1O14494 284 aa10.29□□□□□ -0.76
CLSTN3-206ENST00000535668 ATP6AP2O75787 350 aa10.29□□□□□ -0.76
CLSTN3-206ENST00000535668 SEMA3DO95025 777 aa10.29□□□□□ -0.76
CLSTN3-206ENST00000535668 EPXP11678 715 aa10.29□□□□□ -0.76
CLSTN3-206ENST00000535668 TNNI3P19429 210 aa10.29□□□□□ -0.76
CLSTN3-206ENST00000535668 KLK2P20151 261 aa10.29□□□□□ -0.76
CLSTN3-206ENST00000535668 CPN2P22792 545 aa10.29□□□□□ -0.76
CLSTN3-206ENST00000535668 CRABP2P29373 138 aa10.29□□□□□ -0.76
CLSTN3-206ENST00000535668 SPRP35270 261 aaPredicted RBP10.29□□□□□ -0.76
CLSTN3-206ENST00000535668 BSGP35613 385 aa10.29□□□□□ -0.76
CLSTN3-206ENST00000535668 PIGAP37287 484 aa10.29□□□□□ -0.76
CLSTN3-206ENST00000535668 MSH2P43246 934 aa10.29□□□□□ -0.76
CLSTN3-206ENST00000535668 CDK9P50750 372 aaKnown RBP10.29□□□□□ -0.76
CLSTN3-206ENST00000535668 SLAMF1Q13291 335 aa10.29□□□□□ -0.76
CLSTN3-206ENST00000535668 SNTA1Q13424 505 aa10.29□□□□□ -0.76
CLSTN3-206ENST00000535668 NAB1Q13506 487 aa10.29□□□□□ -0.76
CLSTN3-206ENST00000535668 RPS6KA2Q15349 733 aa10.29□□□□□ -0.76
CLSTN3-206ENST00000535668 PCBP2Q15366 365 aaKnown RBP eCLIP10.29□□□□□ -0.76
CLSTN3-206ENST00000535668 HP1BP3Q5SSJ5 553 aaPredicted RBP10.29□□□□□ -0.76
CLSTN3-206ENST00000535668 GRTP1Q5TC63 336 aa10.29□□□□□ -0.76
CLSTN3-206ENST00000535668 TMEM200AQ86VY9 491 aa10.29□□□□□ -0.76
CLSTN3-206ENST00000535668 ZBED8Q8IZ13 594 aa10.29□□□□□ -0.76
CLSTN3-206ENST00000535668 TAGAPQ8N103 731 aa10.29□□□□□ -0.76
CLSTN3-206ENST00000535668 OR10Q1Q8NGQ4 319 aa10.29□□□□□ -0.76
CLSTN3-206ENST00000535668 HUS1BQ8NHY5 278 aa10.29□□□□□ -0.76
CLSTN3-206ENST00000535668 ZPLD1Q8TCW7 415 aa10.29□□□□□ -0.76
CLSTN3-206ENST00000535668 ADIPOR1Q96A54 375 aa10.29□□□□□ -0.76
CLSTN3-206ENST00000535668 TMEM41AQ96HV5 264 aa10.29□□□□□ -0.76
CLSTN3-206ENST00000535668 DOCK7Q96N67 2140 aa10.29□□□□□ -0.76
CLSTN3-206ENST00000535668 ZFP3Q96NJ6 502 aa10.29□□□□□ -0.76
CLSTN3-206ENST00000535668 DGAT2Q96PD7 388 aa10.29□□□□□ -0.76
CLSTN3-206ENST00000535668 CENPKQ9BS16 269 aa10.29□□□□□ -0.76
CLSTN3-206ENST00000535668 POLDIP3Q9BY77 421 aaKnown RBP10.29□□□□□ -0.76
CLSTN3-206ENST00000535668 CXorf21Q9HAI6 301 aa10.29□□□□□ -0.76
CLSTN3-206ENST00000535668 DMRT3Q9NQL9 472 aa10.29□□□□□ -0.76
CLSTN3-206ENST00000535668 SNX15Q9NRS6 342 aa10.29□□□□□ -0.76
CLSTN3-206ENST00000535668 LYARQ9NX58 379 aaKnown RBP10.29□□□□□ -0.76
CLSTN3-206ENST00000535668 CRIM1Q9NZV1 1036 aa10.29□□□□□ -0.76
CLSTN3-206ENST00000535668 MTRF1LQ9UGC7 380 aaKnown RBP10.29□□□□□ -0.76
CLSTN3-206ENST00000535668 ADAM29Q9UKF5 820 aa10.29□□□□□ -0.76
CLSTN3-206ENST00000535668 STAB1Q9NY15 2570 aa10.29□□□□□ -0.76
CLSTN3-206ENST00000535668 NCF1BA6NI72 391 aaPredicted RBP10.28□□□□□ -0.76
CLSTN3-206ENST00000535668 NCF1CA8MVU1 366 aaPredicted RBP10.28□□□□□ -0.76
CLSTN3-206ENST00000535668 EFCAB8A8MWE9 144 aa10.28□□□□□ -0.76
CLSTN3-206ENST00000535668 CXorf49A8MYA2 514 aaPredicted RBP10.28□□□□□ -0.76
CLSTN3-206ENST00000535668 TP53I11O14683 189 aa10.28□□□□□ -0.76
CLSTN3-206ENST00000535668 RHOXF2BP0C7M4 288 aa10.28□□□□□ -0.76
CLSTN3-206ENST00000535668 NCF1P14598 390 aaPredicted RBP10.28□□□□□ -0.76
CLSTN3-206ENST00000535668 CPN1P15169 458 aa10.28□□□□□ -0.76
CLSTN3-206ENST00000535668 EPB42P16452 691 aa10.28□□□□□ -0.76
CLSTN3-206ENST00000535668 BUD31P41223 144 aaPredicted RBP10.28□□□□□ -0.76
CLSTN3-206ENST00000535668 SSR2P43308 183 aa10.28□□□□□ -0.76
CLSTN3-206ENST00000535668 RPL21P46778 160 aaKnown RBP10.28□□□□□ -0.76
CLSTN3-206ENST00000535668 TMED10P49755 219 aaKnown RBP10.28□□□□□ -0.76
CLSTN3-206ENST00000535668 KCNJ2P63252 427 aa10.28□□□□□ -0.76
CLSTN3-206ENST00000535668 EEF1A1P68104 462 aaKnown RBP10.28□□□□□ -0.76
CLSTN3-206ENST00000535668 GUCY2DQ02846 1103 aa10.28□□□□□ -0.76
CLSTN3-206ENST00000535668 EEF1A1P5Q5VTE0 462 aa10.28□□□□□ -0.76
CLSTN3-206ENST00000535668 PAMR1Q6UXH9 720 aa10.28□□□□□ -0.76
CLSTN3-206ENST00000535668 DGAT2L6Q6ZPD8 337 aa10.28□□□□□ -0.76
CLSTN3-206ENST00000535668 SLC29A4Q7RTT9 530 aa10.28□□□□□ -0.76
CLSTN3-206ENST00000535668 CDC20BQ86Y33 519 aa10.28□□□□□ -0.76
CLSTN3-206ENST00000535668 KIF18BQ86Y91 864 aa10.28□□□□□ -0.76
CLSTN3-206ENST00000535668 ANKMY2Q8IV38 441 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms