RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 GNB5O14775 395 aa7.48□□□□□ -1.21
CLIP1-206ENST00000535290 B3GALT2O43825 422 aa7.48□□□□□ -1.21
CLIP1-206ENST00000535290 SSX4O60224 188 aa7.48□□□□□ -1.21
CLIP1-206ENST00000535290 OR10H2O60403 315 aa7.48□□□□□ -1.21
CLIP1-206ENST00000535290 SNX4O95219 450 aa7.48□□□□□ -1.21
CLIP1-206ENST00000535290 CRHP06850 196 aa7.48□□□□□ -1.21
CLIP1-206ENST00000535290 ENO3P13929 434 aaPredicted RBP7.48□□□□□ -1.21
CLIP1-206ENST00000535290 ITGA2P17301 1181 aa7.48□□□□□ -1.21
CLIP1-206ENST00000535290 PAMP19021 973 aa7.48□□□□□ -1.21
CLIP1-206ENST00000535290 TBXA2RP21731 343 aa7.48□□□□□ -1.21
CLIP1-206ENST00000535290 CCND1P24385 295 aa7.48□□□□□ -1.21
CLIP1-206ENST00000535290 CHMP24386 653 aa7.48□□□□□ -1.21
CLIP1-206ENST00000535290 PTPN6P29350 595 aa7.48□□□□□ -1.21
CLIP1-206ENST00000535290 HNRNPH1P31943 449 aaKnown RBP7.48□□□□□ -1.21
CLIP1-206ENST00000535290 PTPN7P35236 360 aa7.48□□□□□ -1.21
CLIP1-206ENST00000535290 GMPRP36959 345 aa7.48□□□□□ -1.21
CLIP1-206ENST00000535290 LIM2P55344 173 aa7.48□□□□□ -1.21
CLIP1-206ENST00000535290 FBXW4P57775 412 aa7.48□□□□□ -1.21
CLIP1-206ENST00000535290 SIRPAP78324 504 aa7.48□□□□□ -1.21
CLIP1-206ENST00000535290 REEP5Q00765 189 aa7.48□□□□□ -1.21
CLIP1-206ENST00000535290 FUT7Q11130 342 aa7.48□□□□□ -1.21
CLIP1-206ENST00000535290 CSHL1Q14406 222 aa7.48□□□□□ -1.21
CLIP1-206ENST00000535290 RBBP5Q15291 538 aaKnown RBP7.48□□□□□ -1.21
CLIP1-206ENST00000535290 TBCELQ5QJ74 424 aa7.48□□□□□ -1.21
CLIP1-206ENST00000535290 TIGD3Q6B0B8 471 aa7.48□□□□□ -1.21
CLIP1-206ENST00000535290 ZNF549Q6P9A3 640 aa7.48□□□□□ -1.21
CLIP1-206ENST00000535290 SBSNQ6UWP8 590 aa7.48□□□□□ -1.21
CLIP1-206ENST00000535290 DGAT2L6Q6ZPD8 337 aa7.48□□□□□ -1.21
CLIP1-206ENST00000535290 WFDC8Q8IUA0 241 aa7.48□□□□□ -1.21
CLIP1-206ENST00000535290 TRIM42Q8IWZ5 723 aa7.48□□□□□ -1.21
CLIP1-206ENST00000535290 DND1Q8IYX4 353 aaKnown RBP7.48□□□□□ -1.21
CLIP1-206ENST00000535290 TRPV3Q8NET8 790 aa7.48□□□□□ -1.21
CLIP1-206ENST00000535290 SPPL2AQ8TCT8 520 aa7.48□□□□□ -1.21
CLIP1-206ENST00000535290 SMAP2Q8WU79 429 aaPredicted RBP7.48□□□□□ -1.21
CLIP1-206ENST00000535290 NEUROG1Q92886 237 aa7.48□□□□□ -1.21
CLIP1-206ENST00000535290 ZMYND19Q96E35 227 aaPredicted RBP7.48□□□□□ -1.21
CLIP1-206ENST00000535290 FAR2Q96K12 515 aa7.48□□□□□ -1.21
CLIP1-206ENST00000535290 HS6ST2Q96MM7 605 aa7.48□□□□□ -1.21
CLIP1-206ENST00000535290 TSNARE1Q96NA8 513 aa7.48□□□□□ -1.21
CLIP1-206ENST00000535290 GAL3ST4Q96RP7 486 aa7.48□□□□□ -1.21
CLIP1-206ENST00000535290 TCF12Q99081 682 aa7.48□□□□□ -1.21
CLIP1-206ENST00000535290 CHP1Q99653 195 aa7.48□□□□□ -1.21
CLIP1-206ENST00000535290 C12orf65Q9H3J6 166 aaKnown RBP7.48□□□□□ -1.21
CLIP1-206ENST00000535290 CHODLQ9H9P2 273 aa7.48□□□□□ -1.21
CLIP1-206ENST00000535290 KLHL42Q9P2K6 505 aa7.48□□□□□ -1.21
CLIP1-206ENST00000535290 ZNF281Q9Y2X9 895 aa7.48□□□□□ -1.21
CLIP1-206ENST00000535290 DHRS7Q9Y394 339 aa7.48□□□□□ -1.21
CLIP1-206ENST00000535290 CADP27708 2225 aa7.48□□□□□ -1.21
CLIP1-206ENST00000535290 LRIT2A6NDA9 550 aa7.47□□□□□ -1.21
CLIP1-206ENST00000535290 ERI3O43414 337 aaKnown RBP7.47□□□□□ -1.21
CLIP1-206ENST00000535290 HCRTR2O43614 444 aa7.47□□□□□ -1.21
CLIP1-206ENST00000535290 TCF21O43680 179 aa7.47□□□□□ -1.21
CLIP1-206ENST00000535290 ZNF189O75820 626 aaPredicted RBP7.47□□□□□ -1.21
CLIP1-206ENST00000535290 TJP3O95049 919 aa7.47□□□□□ -1.21
CLIP1-206ENST00000535290 CD8AP01732 235 aa7.47□□□□□ -1.21
CLIP1-206ENST00000535290 CERS1P27544 350 aa7.47□□□□□ -1.21
CLIP1-206ENST00000535290 PLA2G16P53816 162 aa7.47□□□□□ -1.21
CLIP1-206ENST00000535290 SERTAD2Q14140 314 aa7.47□□□□□ -1.21
CLIP1-206ENST00000535290 SQLEQ14534 574 aa7.47□□□□□ -1.21
CLIP1-206ENST00000535290 EFTUD2Q15029 972 aaKnown RBP eCLIP7.47□□□□□ -1.21
CLIP1-206ENST00000535290 RPS6KA2Q15349 733 aa7.47□□□□□ -1.21
CLIP1-206ENST00000535290 PGGHGQ32M88 737 aa7.47□□□□□ -1.21
CLIP1-206ENST00000535290 UGT3A1Q6NUS8 523 aa7.47□□□□□ -1.21
CLIP1-206ENST00000535290 ADAM5Q6NVV9 412 aa7.47□□□□□ -1.21
CLIP1-206ENST00000535290 ENPP6Q6UWR7 440 aa7.47□□□□□ -1.21
CLIP1-206ENST00000535290 PRUNE1Q86TP1 453 aa7.47□□□□□ -1.21
CLIP1-206ENST00000535290 OR4N5Q8IXE1 308 aa7.47□□□□□ -1.21
CLIP1-206ENST00000535290 KLHDC8AQ8IYD2 350 aa7.47□□□□□ -1.21
CLIP1-206ENST00000535290 PLPP7Q8NBV4 271 aa7.47□□□□□ -1.21
CLIP1-206ENST00000535290 OR56A3Q8NH54 315 aa7.47□□□□□ -1.21
CLIP1-206ENST00000535290 SLC35B2Q8TB61 432 aa7.47□□□□□ -1.21
CLIP1-206ENST00000535290 CD200R1Q8TD46 325 aa7.47□□□□□ -1.21
CLIP1-206ENST00000535290 SLC5A11Q8WWX8 675 aa7.47□□□□□ -1.21
CLIP1-206ENST00000535290 KCNJ9Q92806 393 aa7.47□□□□□ -1.21
CLIP1-206ENST00000535290 FBXW5Q969U6 566 aa7.47□□□□□ -1.21
CLIP1-206ENST00000535290 GAL3ST3Q96A11 431 aa7.47□□□□□ -1.21
CLIP1-206ENST00000535290 PPWD1Q96BP3 646 aaKnown RBP7.47□□□□□ -1.21
CLIP1-206ENST00000535290 REPS1Q96D71 796 aa7.47□□□□□ -1.21
CLIP1-206ENST00000535290 MS4A6EQ96DS6 147 aa7.47□□□□□ -1.21
CLIP1-206ENST00000535290 ZNF845Q96IR2 970 aaPredicted RBP7.47□□□□□ -1.21
CLIP1-206ENST00000535290 GPR21Q99679 349 aa7.47□□□□□ -1.21
CLIP1-206ENST00000535290 OCSTAMPQ9BR26 566 aa7.47□□□□□ -1.21
CLIP1-206ENST00000535290 PHACTR1Q9C0D0 580 aa7.47□□□□□ -1.21
CLIP1-206ENST00000535290 PARVBQ9HBI1 364 aa7.47□□□□□ -1.21
CLIP1-206ENST00000535290 BARX1Q9HBU1 254 aaPredicted RBP7.47□□□□□ -1.21
CLIP1-206ENST00000535290 WWOXQ9NZC7 414 aa7.47□□□□□ -1.21
CLIP1-206ENST00000535290 DAPP1Q9UN19 280 aa7.47□□□□□ -1.21
CLIP1-206ENST00000535290 WNK1Q9H4A3 2382 aa7.46□□□□□ -1.21
CLIP1-206ENST00000535290 SYNDIG1LA6NDD5 238 aa7.46□□□□□ -1.22
CLIP1-206ENST00000535290 ELOA3DA6NLF2 546 aaPredicted RBP7.46□□□□□ -1.22
CLIP1-206ENST00000535290 E7EVH7 732 aa7.46□□□□□ -1.22
CLIP1-206ENST00000535290 TP53I11O14683 189 aa7.46□□□□□ -1.22
CLIP1-206ENST00000535290 PFDN6O15212 129 aa7.46□□□□□ -1.22
CLIP1-206ENST00000535290 CLOCKO15516 846 aa7.46□□□□□ -1.22
CLIP1-206ENST00000535290 TBX6O95947 436 aaPredicted RBP7.46□□□□□ -1.22
CLIP1-206ENST00000535290 APRTP07741 180 aa7.46□□□□□ -1.22
CLIP1-206ENST00000535290 CD8BP10966 210 aa7.46□□□□□ -1.22
CLIP1-206ENST00000535290 OGNP20774 298 aaKnown RBP7.46□□□□□ -1.22
CLIP1-206ENST00000535290 CTNNA1P35221 906 aaKnown RBP7.46□□□□□ -1.22
CLIP1-206ENST00000535290 GCKP35557 465 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms