RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 EIF1ADQ8N9N8 165 aaKnown RBP3.08□□□□□ -1.92
USP48-215ENST00000534705 MLKLQ8NB16 471 aa3.08□□□□□ -1.92
USP48-215ENST00000534705 XXYLT1Q8NBI6 393 aa3.08□□□□□ -1.92
USP48-215ENST00000534705 NOA1Q8NC60 698 aaKnown RBP3.08□□□□□ -1.92
USP48-215ENST00000534705 ZNF485Q8NCK3 441 aa3.08□□□□□ -1.92
USP48-215ENST00000534705 DDHD1Q8NEL9 900 aa3.08□□□□□ -1.92
USP48-215ENST00000534705 OR1J1Q8NGS3 322 aa3.08□□□□□ -1.92
USP48-215ENST00000534705 PHOSPHO2Q8TCD6 241 aa3.08□□□□□ -1.92
USP48-215ENST00000534705 ATP8B4Q8TF62 1192 aa3.08□□□□□ -1.92
USP48-215ENST00000534705 TEKT4Q8WW24 435 aa3.08□□□□□ -1.92
USP48-215ENST00000534705 MAIP1Q8WWC4 291 aa3.08□□□□□ -1.92
USP48-215ENST00000534705 DNAJB3Q8WWF6 145 aa3.08□□□□□ -1.92
USP48-215ENST00000534705 GIMAP1Q8WWP7 306 aa3.08□□□□□ -1.92
USP48-215ENST00000534705 MR1Q95460 341 aa3.08□□□□□ -1.92
USP48-215ENST00000534705 ZNF689Q96CS4 500 aaPredicted RBP3.08□□□□□ -1.92
USP48-215ENST00000534705 TMCO6Q96DC7 493 aa3.08□□□□□ -1.92
USP48-215ENST00000534705 GIMAP5Q96F15 307 aa3.08□□□□□ -1.92
USP48-215ENST00000534705 VPS39Q96JC1 886 aa3.08□□□□□ -1.92
USP48-215ENST00000534705 FAM20AQ96MK3 541 aa3.08□□□□□ -1.92
USP48-215ENST00000534705 PANX2Q96RD6 677 aa3.08□□□□□ -1.92
USP48-215ENST00000534705 CCT8L2Q96SF2 557 aa3.08□□□□□ -1.92
USP48-215ENST00000534705 CDX2Q99626 313 aaPredicted RBP3.08□□□□□ -1.92
USP48-215ENST00000534705 SYT15Q9BQS2 421 aa3.08□□□□□ -1.92
USP48-215ENST00000534705 TIPINQ9BVW5 301 aa3.08□□□□□ -1.92
USP48-215ENST00000534705 TEKT3Q9BXF9 490 aa3.08□□□□□ -1.92
USP48-215ENST00000534705 PITPNM3Q9BZ71 974 aa3.08□□□□□ -1.92
USP48-215ENST00000534705 TRIM4Q9C037 500 aa3.08□□□□□ -1.92
USP48-215ENST00000534705 FAM192AQ9GZU8 254 aa3.08□□□□□ -1.92
USP48-215ENST00000534705 NACA2Q9H009 215 aa3.08□□□□□ -1.92
USP48-215ENST00000534705 ABCG8Q9H221 673 aa3.08□□□□□ -1.92
USP48-215ENST00000534705 ARRDC1-AS1Q9H2J1 176 aa3.08□□□□□ -1.92
USP48-215ENST00000534705 ZNF71Q9NQZ8 489 aaPredicted RBP3.08□□□□□ -1.92
USP48-215ENST00000534705 ZNF302Q9NR11 478 aa3.08□□□□□ -1.92
USP48-215ENST00000534705 ARHGEF38Q9NXL2 777 aa3.08□□□□□ -1.92
USP48-215ENST00000534705 ACTR3BQ9P1U1 418 aa3.08□□□□□ -1.92
USP48-215ENST00000534705 RHCGQ9UBD6 479 aa3.08□□□□□ -1.92
USP48-215ENST00000534705 DNAJB9Q9UBS3 223 aa3.08□□□□□ -1.92
USP48-215ENST00000534705 SLC12A6Q9UHW9 1150 aa3.08□□□□□ -1.92
USP48-215ENST00000534705 RPL26L1Q9UNX3 145 aaKnown RBP3.08□□□□□ -1.92
USP48-215ENST00000534705 L3MBTL1Q9Y468 752 aa3.08□□□□□ -1.92
USP48-215ENST00000534705 SMAD5-AS1Q9Y6J3 95 aa3.08□□□□□ -1.92
USP48-215ENST00000534705 EML5Q05BV3 1969 aa3.08□□□□□ -1.92
USP48-215ENST00000534705 ATG2BQ96BY7 2078 aa3.08□□□□□ -1.92
USP48-215ENST00000534705 COL4A2P08572 1712 aa3.07□□□□□ -1.92
USP48-215ENST00000534705 TICRRQ7Z2Z1 1910 aa3.07□□□□□ -1.92
USP48-215ENST00000534705 CEP192Q8TEP8 1941 aa3.07□□□□□ -1.92
USP48-215ENST00000534705 TECTAO75443 2155 aa3.07□□□□□ -1.92
USP48-215ENST00000534705 A0A1W2PRV1 198 aa3.07□□□□□ -1.92
USP48-215ENST00000534705 CTAGE15A4D2H0 777 aa3.07□□□□□ -1.92
USP48-215ENST00000534705 E9PI62 339 aa3.07□□□□□ -1.92
USP48-215ENST00000534705 CCDC188H7C350 402 aa3.07□□□□□ -1.92
USP48-215ENST00000534705 NDUFAB1O14561 156 aa3.07□□□□□ -1.92
USP48-215ENST00000534705 ATP6V0E1O15342 81 aa3.07□□□□□ -1.92
USP48-215ENST00000534705 TRAPPC3O43617 180 aa3.07□□□□□ -1.92
USP48-215ENST00000534705 MED24O75448 989 aa3.07□□□□□ -1.92
USP48-215ENST00000534705 DDHD2O94830 711 aa3.07□□□□□ -1.92
USP48-215ENST00000534705 SLITRK3O94933 977 aa3.07□□□□□ -1.92
USP48-215ENST00000534705 SIX3O95343 332 aaPredicted RBP3.07□□□□□ -1.92
USP48-215ENST00000534705 LYPLA2O95372 231 aa3.07□□□□□ -1.92
USP48-215ENST00000534705 GJB5O95377 273 aa3.07□□□□□ -1.92
USP48-215ENST00000534705 PIGNO95427 931 aa3.07□□□□□ -1.92
USP48-215ENST00000534705 VTNP04004 478 aa3.07□□□□□ -1.92
USP48-215ENST00000534705 CA3P07451 260 aa3.07□□□□□ -1.92
USP48-215ENST00000534705 CD48P09326 243 aa3.07□□□□□ -1.92
USP48-215ENST00000534705 FRMD6-AS1P0C7T7 363 aa3.07□□□□□ -1.92
USP48-215ENST00000534705 KRT5P13647 590 aa3.07□□□□□ -1.92
USP48-215ENST00000534705 CEACAM1P13688 526 aa3.07□□□□□ -1.92
USP48-215ENST00000534705 ACADSP16219 412 aa3.07□□□□□ -1.92
USP48-215ENST00000534705 ZNF18P17022 549 aa3.07□□□□□ -1.92
USP48-215ENST00000534705 ZNF26P17031 533 aaPredicted RBP3.07□□□□□ -1.92
USP48-215ENST00000534705 TRIM21P19474 475 aaKnown RBP3.07□□□□□ -1.92
USP48-215ENST00000534705 TYMPP19971 482 aa3.07□□□□□ -1.92
USP48-215ENST00000534705 ATP6V1C1P21283 382 aa3.07□□□□□ -1.92
USP48-215ENST00000534705 CALB2P22676 271 aa3.07□□□□□ -1.92
USP48-215ENST00000534705 GJB2P29033 226 aa3.07□□□□□ -1.92
USP48-215ENST00000534705 CD52P31358 61 aa3.07□□□□□ -1.92
USP48-215ENST00000534705 SFNP31947 248 aa3.07□□□□□ -1.92
USP48-215ENST00000534705 MDH1P40925 334 aaKnown RBP3.07□□□□□ -1.92
USP48-215ENST00000534705 CCR10P46092 362 aa3.07□□□□□ -1.92
USP48-215ENST00000534705 ACADVLP49748 655 aa3.07□□□□□ -1.92
USP48-215ENST00000534705 SLC12A3P55017 1021 aa3.07□□□□□ -1.92
USP48-215ENST00000534705 STARD6P59095 220 aa3.07□□□□□ -1.92
USP48-215ENST00000534705 GNG11P61952 73 aa3.07□□□□□ -1.92
USP48-215ENST00000534705 CX3CL1P78423 397 aa3.07□□□□□ -1.92
USP48-215ENST00000534705 MRPS6P82932 125 aaKnown RBP3.07□□□□□ -1.92
USP48-215ENST00000534705 HTD2P86397 168 aa3.07□□□□□ -1.92
USP48-215ENST00000534705 KLHL30Q0D2K2 578 aa3.07□□□□□ -1.92
USP48-215ENST00000534705 P2RY6Q15077 328 aa3.07□□□□□ -1.92
USP48-215ENST00000534705 IL17AQ16552 155 aa3.07□□□□□ -1.92
USP48-215ENST00000534705 CAMK4Q16566 473 aa3.07□□□□□ -1.92
USP48-215ENST00000534705 FUT11Q495W5 492 aa3.07□□□□□ -1.92
USP48-215ENST00000534705 GTDC1Q4AE62 458 aa3.07□□□□□ -1.92
USP48-215ENST00000534705 ANKRD20A4Q4UJ75 823 aa3.07□□□□□ -1.92
USP48-215ENST00000534705 C14orf177Q52M58 125 aa3.07□□□□□ -1.92
USP48-215ENST00000534705 MDH1BQ5I0G3 518 aa3.07□□□□□ -1.92
USP48-215ENST00000534705 ANKRD20A2Q5SQ80 823 aa3.07□□□□□ -1.92
USP48-215ENST00000534705 ANKRD20A1Q5TYW2 823 aa3.07□□□□□ -1.92
USP48-215ENST00000534705 ANKRD20A3Q5VUR7 823 aa3.07□□□□□ -1.92
USP48-215ENST00000534705 EMBQ6PCB8 327 aa3.07□□□□□ -1.92
USP48-215ENST00000534705 C16orf87Q6PH81 154 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms