RNA–Protein interactions for RNA: ENST00000534532.6

NCAPD3-213, Transcript of non-SMC condensin II complex subunit D3, human

TSL 2

Gene NCAPD3, Length 5,539 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAPD3-213	ENST00000534532	YPEL5	P62699	121 aa		15.02	■□□□□ -0
NCAPD3-213	ENST00000534532	ODF4	Q2M2E3	257 aa		15.02	■□□□□ -0
NCAPD3-213	ENST00000534532	ALG10	Q5BKT4	473 aa		15.02	■□□□□ -0
NCAPD3-213	ENST00000534532	HMBOX1	Q6NT76	420 aa		15.02	■□□□□ -0
NCAPD3-213	ENST00000534532	B3GNT9	Q6UX72	402 aa		15.02	■□□□□ -0
NCAPD3-213	ENST00000534532	AGBL5	Q8NDL9	886 aa		15.02	■□□□□ -0
NCAPD3-213	ENST00000534532	SPPL3	Q8TCT6	385 aa		15.02	■□□□□ -0
NCAPD3-213	ENST00000534532	SFXN2	Q96NB2	322 aa		15.02	■□□□□ -0
NCAPD3-213	ENST00000534532	MRO	Q9BYG7	248 aa		15.02	■□□□□ -0
NCAPD3-213	ENST00000534532	GRXCR2	A6NFK2	248 aa		15.02	□□□□□ -0.01
NCAPD3-213	ENST00000534532	ITGBL1	O95965	494 aa	Predicted RBP	15.02	□□□□□ -0.01
NCAPD3-213	ENST00000534532	TIMP2	P16035	220 aa		15.02	□□□□□ -0.01
NCAPD3-213	ENST00000534532	CD36	P16671	472 aa		15.02	□□□□□ -0.01
NCAPD3-213	ENST00000534532	F8A1	P23610	371 aa		15.02	□□□□□ -0.01
NCAPD3-213	ENST00000534532	AQP4	P55087	323 aa		15.02	□□□□□ -0.01
NCAPD3-213	ENST00000534532	WNT7B	P56706	349 aa		15.02	□□□□□ -0.01
NCAPD3-213	ENST00000534532	ABRAXAS2	Q15018	415 aa		15.02	□□□□□ -0.01
NCAPD3-213	ENST00000534532	LRIT3	Q3SXY7	679 aa		15.02	□□□□□ -0.01
NCAPD3-213	ENST00000534532	HSD11B1L	Q7Z5J1	315 aa		15.02	□□□□□ -0.01
NCAPD3-213	ENST00000534532	FKBP10	Q96AY3	582 aa		15.02	□□□□□ -0.01
NCAPD3-213	ENST00000534532	TMEM41A	Q96HV5	264 aa		15.02	□□□□□ -0.01
NCAPD3-213	ENST00000534532	PGAP2	Q9UHJ9	254 aa		15.02	□□□□□ -0.01
NCAPD3-213	ENST00000534532	SOBP	A7XYQ1	873 aa		15.02	□□□□□ -0.01
NCAPD3-213	ENST00000534532	AHCYL1	O43865	530 aa		15.02	□□□□□ -0.01
NCAPD3-213	ENST00000534532	ITIH1	P19827	911 aa		15.02	□□□□□ -0.01
NCAPD3-213	ENST00000534532	MAG	P20916	626 aa		15.02	□□□□□ -0.01
NCAPD3-213	ENST00000534532	MFSD13A	Q14CX5	517 aa		15.02	□□□□□ -0.01
NCAPD3-213	ENST00000534532	VMAC	Q2NL98	169 aa		15.02	□□□□□ -0.01
NCAPD3-213	ENST00000534532	GRHL2	Q6ISB3	625 aa		15.02	□□□□□ -0.01
NCAPD3-213	ENST00000534532	PHTF2	Q8N3S3	785 aa		15.02	□□□□□ -0.01
NCAPD3-213	ENST00000534532	DEFB123	Q8N688	67 aa		15.02	□□□□□ -0.01
NCAPD3-213	ENST00000534532	KRTCAP2	Q8N6L1	136 aa		15.02	□□□□□ -0.01
NCAPD3-213	ENST00000534532	OR2T33	Q8NG76	320 aa		15.02	□□□□□ -0.01
NCAPD3-213	ENST00000534532	TIMM29	Q9BSF4	260 aa		15.02	□□□□□ -0.01
NCAPD3-213	ENST00000534532	CSNK1G1	Q9HCP0	422 aa		15.02	□□□□□ -0.01
NCAPD3-213	ENST00000534532	ENY2	Q9NPA8	101 aa		15.02	□□□□□ -0.01
NCAPD3-213	ENST00000534532	NANS	Q9NR45	359 aa		15.02	□□□□□ -0.01
NCAPD3-213	ENST00000534532	OR6C2	Q9NZP2	312 aa		15.02	□□□□□ -0.01
NCAPD3-213	ENST00000534532		E7ESA3	106 aa		15.01	□□□□□ -0.01
NCAPD3-213	ENST00000534532	HRG	P04196	525 aa		15.01	□□□□□ -0.01
NCAPD3-213	ENST00000534532	CDKL4	Q5MAI5	379 aa		15.01	□□□□□ -0.01
NCAPD3-213	ENST00000534532	ZNF559	Q9BR84	538 aa		15.01	□□□□□ -0.01
NCAPD3-213	ENST00000534532	C2orf92	A0A1B0GVN3	265 aa		15.01	□□□□□ -0.01
NCAPD3-213	ENST00000534532	EME2	A4GXA9	379 aa	Predicted RBP	15.01	□□□□□ -0.01
NCAPD3-213	ENST00000534532	PPP1R8	Q12972	351 aa	Known RBP	15.01	□□□□□ -0.01
NCAPD3-213	ENST00000534532	SHQ1	Q6PI26	577 aa	Known RBP	15.01	□□□□□ -0.01
NCAPD3-213	ENST00000534532	LCTL	Q6UWM7	567 aa		15.01	□□□□□ -0.01
NCAPD3-213	ENST00000534532	MAMDC2	Q7Z304	686 aa	Predicted RBP	15.01	□□□□□ -0.01
NCAPD3-213	ENST00000534532	SLITRK4	Q8IW52	837 aa		15.01	□□□□□ -0.01
NCAPD3-213	ENST00000534532	OR51A7	Q8NH64	312 aa		15.01	□□□□□ -0.01
NCAPD3-213	ENST00000534532	RNF38	Q9H0F5	515 aa		15.01	□□□□□ -0.01
NCAPD3-213	ENST00000534532	ZBP1	Q9H171	429 aa		15.01	□□□□□ -0.01
NCAPD3-213	ENST00000534532	SPO11	Q9Y5K1	396 aa		15.01	□□□□□ -0.01
NCAPD3-213	ENST00000534532	ADAM12	O43184	909 aa		15.01	□□□□□ -0.01
NCAPD3-213	ENST00000534532	OR1E2	P47887	323 aa		15.01	□□□□□ -0.01
NCAPD3-213	ENST00000534532	GINS1	Q14691	196 aa		15.01	□□□□□ -0.01
NCAPD3-213	ENST00000534532	ENPP6	Q6UWR7	440 aa		15.01	□□□□□ -0.01
NCAPD3-213	ENST00000534532	ZER1	Q7Z7L7	766 aa		15.01	□□□□□ -0.01
NCAPD3-213	ENST00000534532	ARL14	Q8N4G2	192 aa		15.01	□□□□□ -0.01
NCAPD3-213	ENST00000534532	DOHH	Q9BU89	302 aa		15.01	□□□□□ -0.01
NCAPD3-213	ENST00000534532	CPNE7	Q9UBL6	633 aa		15.01	□□□□□ -0.01
NCAPD3-213	ENST00000534532	EXOSC1	Q9Y3B2	195 aa	Known RBP	15.01	□□□□□ -0.01
NCAPD3-213	ENST00000534532	LOC100130705	A0A1B0GUX0	176 aa		15.01	□□□□□ -0.01
NCAPD3-213	ENST00000534532	FGF3	P11487	239 aa	Predicted RBP	15.01	□□□□□ -0.01
NCAPD3-213	ENST00000534532	ATF6	P18850	670 aa		15.01	□□□□□ -0.01
NCAPD3-213	ENST00000534532	NDUFAF5	Q5TEU4	345 aa		15.01	□□□□□ -0.01
NCAPD3-213	ENST00000534532	MCAT	Q8IVS2	390 aa	Known RBP	15.01	□□□□□ -0.01
NCAPD3-213	ENST00000534532	TCEANC	Q8N8B7	351 aa		15.01	□□□□□ -0.01
NCAPD3-213	ENST00000534532	PGAM5	Q96HS1	289 aa		15.01	□□□□□ -0.01
NCAPD3-213	ENST00000534532		A0A1B0GTW7	788 aa		15	□□□□□ -0.01
NCAPD3-213	ENST00000534532	ORC5	O43913	435 aa		15	□□□□□ -0.01
NCAPD3-213	ENST00000534532	ZNF35	P13682	527 aa		15	□□□□□ -0.01
NCAPD3-213	ENST00000534532	IL4R	P24394	825 aa		15	□□□□□ -0.01
NCAPD3-213	ENST00000534532	ACADVL	P49748	655 aa		15	□□□□□ -0.01
NCAPD3-213	ENST00000534532	NR0B1	P51843	470 aa	Known RBP	15	□□□□□ -0.01
NCAPD3-213	ENST00000534532	CLDN8	P56748	225 aa		15	□□□□□ -0.01
NCAPD3-213	ENST00000534532	CRYZ	Q08257	329 aa	Known RBP	15	□□□□□ -0.01
NCAPD3-213	ENST00000534532	ARHGAP19	Q14CB8	494 aa		15	□□□□□ -0.01
NCAPD3-213	ENST00000534532	NANOGP8	Q6NSW7	305 aa		15	□□□□□ -0.01
NCAPD3-213	ENST00000534532	SLC27A4	Q6P1M0	643 aa		15	□□□□□ -0.01
NCAPD3-213	ENST00000534532	NANOG	Q9H9S0	305 aa		15	□□□□□ -0.01
NCAPD3-213	ENST00000534532	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	15	□□□□□ -0.01
NCAPD3-213	ENST00000534532	SLC9B1P1	A6NJY1	282 aa		15	□□□□□ -0.01
NCAPD3-213	ENST00000534532	SCAMP2	O15127	329 aa	Known RBP	15	□□□□□ -0.01
NCAPD3-213	ENST00000534532	ALDOA	P04075	364 aa	Known RBP	15	□□□□□ -0.01
NCAPD3-213	ENST00000534532	DCK	P27707	260 aa		15	□□□□□ -0.01
NCAPD3-213	ENST00000534532	MECP2	P51608	486 aa	Known RBP	15	□□□□□ -0.01
NCAPD3-213	ENST00000534532	CTBS	Q01459	385 aa		15	□□□□□ -0.01
NCAPD3-213	ENST00000534532	RHD	Q02161	417 aa		15	□□□□□ -0.01
NCAPD3-213	ENST00000534532	CLCA4	Q14CN2	919 aa		15	□□□□□ -0.01
NCAPD3-213	ENST00000534532	SHH	Q15465	462 aa		15	□□□□□ -0.01
NCAPD3-213	ENST00000534532	STEAP4	Q687X5	459 aa		15	□□□□□ -0.01
NCAPD3-213	ENST00000534532	DOK4	Q8TEW6	326 aa		15	□□□□□ -0.01
NCAPD3-213	ENST00000534532	TMEM80	Q96HE8	168 aa		15	□□□□□ -0.01
NCAPD3-213	ENST00000534532	CSN2	P05814	226 aa		15	□□□□□ -0.01
NCAPD3-213	ENST00000534532	ETS2	P15036	469 aa		15	□□□□□ -0.01
NCAPD3-213	ENST00000534532	PTN	P21246	168 aa		15	□□□□□ -0.01
NCAPD3-213	ENST00000534532	NUDT6	P53370	316 aa		15	□□□□□ -0.01
NCAPD3-213	ENST00000534532	HERV-K104	P61576	105 aa		15	□□□□□ -0.01
NCAPD3-213	ENST00000534532	ARHGAP22	Q7Z5H3	698 aa		15	□□□□□ -0.01

Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms