RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 PDZK1Q5T2W1 519 aa15.76■□□□□ 0.11
CTSB-228ENST00000533455 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.76■□□□□ 0.111e-6■□□□□ 9
CTSB-228ENST00000533455 TMEM25Q86YD3 366 aa15.76■□□□□ 0.11
CTSB-228ENST00000533455 ZNF689Q96CS4 500 aaPredicted RBP15.76■□□□□ 0.11
CTSB-228ENST00000533455 AP2M1Q96CW1 435 aa15.76■□□□□ 0.11
CTSB-228ENST00000533455 DIRAS2Q96HU8 199 aa15.76■□□□□ 0.11
CTSB-228ENST00000533455 ZNF558Q96NG5 402 aa15.76■□□□□ 0.11
CTSB-228ENST00000533455 SORBS1Q9BX66 1292 aaKnown RBP15.76■□□□□ 0.11
CTSB-228ENST00000533455 RNF121Q9H920 327 aa15.76■□□□□ 0.11
CTSB-228ENST00000533455 NEUROD4Q9HD90 331 aa15.76■□□□□ 0.11
CTSB-228ENST00000533455 TRPV5Q9NQA5 729 aa15.76■□□□□ 0.11
CTSB-228ENST00000533455 MRPS18AQ9NVS2 196 aaKnown RBP15.76■□□□□ 0.11
CTSB-228ENST00000533455 TVP23BQ9NYZ1 205 aa15.76■□□□□ 0.11
CTSB-228ENST00000533455 ABT1Q9ULW3 272 aaKnown RBP15.76■□□□□ 0.11
CTSB-228ENST00000533455 LILRB5O75023 590 aa15.75■□□□□ 0.11
CTSB-228ENST00000533455 ALX3O95076 343 aa15.75■□□□□ 0.11
CTSB-228ENST00000533455 HLA-DQB1P01920 261 aa15.75■□□□□ 0.11
CTSB-228ENST00000533455 HLA-DMAP28067 261 aa15.75■□□□□ 0.11
CTSB-228ENST00000533455 MMP12P39900 470 aa15.75■□□□□ 0.11
CTSB-228ENST00000533455 ETV5P41161 510 aa15.75■□□□□ 0.11
CTSB-228ENST00000533455 ETV1P50549 477 aa15.75■□□□□ 0.11
CTSB-228ENST00000533455 GAS1P54826 345 aa15.75■□□□□ 0.11
CTSB-228ENST00000533455 TARDBPQ13148 414 aaKnown RBP eCLIP15.75■□□□□ 0.111e-6■■■■■ 31.2
CTSB-228ENST00000533455 ZNF628Q5EBL2 1059 aa15.75■□□□□ 0.11
CTSB-228ENST00000533455 PPP2R2DQ66LE6 453 aa15.75■□□□□ 0.11
CTSB-228ENST00000533455 C22orf42Q6IC83 251 aa15.75■□□□□ 0.11
CTSB-228ENST00000533455 ADIPOR2Q86V24 386 aa15.75■□□□□ 0.11
CTSB-228ENST00000533455 RBM45Q8IUH3 476 aaKnown RBP15.75■□□□□ 0.11
CTSB-228ENST00000533455 NRSN1Q8IZ57 195 aa15.75■□□□□ 0.11
CTSB-228ENST00000533455 LMNTD1Q8N9Z9 388 aa15.75■□□□□ 0.11
CTSB-228ENST00000533455 ZNF740Q8NDX6 193 aa15.75■□□□□ 0.11
CTSB-228ENST00000533455 SLC7A13Q8TCU3 470 aa15.75■□□□□ 0.11
CTSB-228ENST00000533455 SETD7Q8WTS6 366 aaKnown RBP15.75■□□□□ 0.11
CTSB-228ENST00000533455 SCLYQ96I15 445 aa15.75■□□□□ 0.11
CTSB-228ENST00000533455 KCTD7Q96MP8 289 aa15.75■□□□□ 0.11
CTSB-228ENST00000533455 FRMD6Q96NE9 622 aa15.75■□□□□ 0.11
CTSB-228ENST00000533455 ZNF607Q96SK3 696 aa15.75■□□□□ 0.11
CTSB-228ENST00000533455 RANGRFQ9HD47 186 aaPredicted RBP15.75■□□□□ 0.11
CTSB-228ENST00000533455 ZSCAN32Q9NX65 697 aa15.75■□□□□ 0.11
CTSB-228ENST00000533455 AHSPQ9NZD4 102 aa15.75■□□□□ 0.11
CTSB-228ENST00000533455 NUFIP1Q9UHK0 495 aaKnown RBP15.75■□□□□ 0.11
CTSB-228ENST00000533455 A4GNTQ9UNA3 340 aa15.75■□□□□ 0.11
CTSB-228ENST00000533455 SF3B6Q9Y3B4 125 aaKnown RBP15.75■□□□□ 0.11
CTSB-228ENST00000533455 BOLA1Q9Y3E2 137 aa15.75■□□□□ 0.11
CTSB-228ENST00000533455 A0A0B4J293 547 aa15.75■□□□□ 0.11
CTSB-228ENST00000533455 LINC00854A0A1B0GVQ3 168 aa15.75■□□□□ 0.11
CTSB-228ENST00000533455 A0A1W2PRQ8 180 aa15.75■□□□□ 0.11
CTSB-228ENST00000533455 IRGMA1A4Y4 181 aa15.75■□□□□ 0.11
CTSB-228ENST00000533455 ANKDD1BA6NHY2 528 aa15.75■□□□□ 0.11
CTSB-228ENST00000533455 FAM25AB3EWG3 89 aa15.75■□□□□ 0.11
CTSB-228ENST00000533455 FAM25CB3EWG5 89 aa15.75■□□□□ 0.11
CTSB-228ENST00000533455 FAM25GB3EWG6 89 aa15.75■□□□□ 0.11
CTSB-228ENST00000533455 HMGN4O00479 90 aa15.75■□□□□ 0.11
CTSB-228ENST00000533455 PDPK1O15530 556 aa15.75■□□□□ 0.11
CTSB-228ENST00000533455 TLX2O43763 284 aaPredicted RBP15.75■□□□□ 0.11
CTSB-228ENST00000533455 TMCC2O75069 709 aa15.75■□□□□ 0.11
CTSB-228ENST00000533455 FRKP42685 505 aaPredicted RBP15.75■□□□□ 0.11
CTSB-228ENST00000533455 WNT4P56705 351 aa15.75■□□□□ 0.11
CTSB-228ENST00000533455 EFNB1P98172 346 aa15.75■□□□□ 0.11
CTSB-228ENST00000533455 CHRNEQ04844 493 aa15.75■□□□□ 0.11
CTSB-228ENST00000533455 CNTN1Q12860 1018 aa15.75■□□□□ 0.11
CTSB-228ENST00000533455 TPBGQ13641 420 aa15.75■□□□□ 0.11
CTSB-228ENST00000533455 KLHL22Q53GT1 634 aa15.75■□□□□ 0.11
CTSB-228ENST00000533455 ATAT1Q5SQI0 421 aa15.75■□□□□ 0.11
CTSB-228ENST00000533455 SPOUT1Q5T280 376 aaKnown RBP15.75■□□□□ 0.11
CTSB-228ENST00000533455 TMIGD1Q6UXZ0 262 aa15.75■□□□□ 0.11
CTSB-228ENST00000533455 LIPIQ6XZB0 460 aa15.75■□□□□ 0.11
CTSB-228ENST00000533455 QSOX2Q6ZRP7 698 aa15.75■□□□□ 0.11
CTSB-228ENST00000533455 ZNF438Q7Z4V0 828 aa15.75■□□□□ 0.11
CTSB-228ENST00000533455 LIX1LQ8IVB5 337 aa15.75■□□□□ 0.11
CTSB-228ENST00000533455 ADGRF3Q8IZF5 1079 aa15.75■□□□□ 0.11
CTSB-228ENST00000533455 LINC00471Q8N535 108 aa15.75■□□□□ 0.11
CTSB-228ENST00000533455 IQCF1Q8N6M8 205 aa15.75■□□□□ 0.11
CTSB-228ENST00000533455 CELF5Q8N6W0 485 aaKnown RBP15.75■□□□□ 0.11
CTSB-228ENST00000533455 GRPEL2Q8TAA5 225 aa15.75■□□□□ 0.11
CTSB-228ENST00000533455 AP3S1Q92572 193 aa15.75■□□□□ 0.11
CTSB-228ENST00000533455 RNF31Q96EP0 1072 aa15.75■□□□□ 0.11
CTSB-228ENST00000533455 ZNF582Q96NG8 517 aaPredicted RBP15.75■□□□□ 0.11
CTSB-228ENST00000533455 ZNF717Q9BY31 904 aaPredicted RBP15.75■□□□□ 0.11
CTSB-228ENST00000533455 SMG9Q9H0W8 520 aaKnown RBP15.75■□□□□ 0.11
CTSB-228ENST00000533455 MVB12BQ9H7P6 319 aa15.75■□□□□ 0.11
CTSB-228ENST00000533455 ANKRA2Q9H9E1 313 aa15.75■□□□□ 0.11
CTSB-228ENST00000533455 FGF20Q9NP95 211 aaPredicted RBP15.75■□□□□ 0.11
CTSB-228ENST00000533455 PLSCR3Q9NRY6 295 aa15.75■□□□□ 0.11
CTSB-228ENST00000533455 SIRT3Q9NTG7 399 aaPredicted RBP15.75■□□□□ 0.11
CTSB-228ENST00000533455 DKK3Q9UBP4 350 aa15.75■□□□□ 0.11
CTSB-228ENST00000533455 SPIN1Q9Y657 262 aaPredicted RBP15.75■□□□□ 0.11
CTSB-228ENST00000533455 LRRK1Q38SD2 2015 aa15.74■□□□□ 0.11
CTSB-228ENST00000533455 TMEM129A0AVI4 362 aa15.74■□□□□ 0.11
CTSB-228ENST00000533455 ANHXE9PGG2 379 aa15.74■□□□□ 0.11
CTSB-228ENST00000533455 NEDD8-MDP1E9PL57 170 aa15.74■□□□□ 0.11
CTSB-228ENST00000533455 TEX28O15482 410 aa15.74■□□□□ 0.11
CTSB-228ENST00000533455 PLA2G10O15496 165 aa15.74■□□□□ 0.11
CTSB-228ENST00000533455 HCN1O60741 890 aa15.74■□□□□ 0.11
CTSB-228ENST00000533455 B4GALT2O60909 372 aa15.74■□□□□ 0.11
CTSB-228ENST00000533455 NME6O75414 186 aaPredicted RBP15.74■□□□□ 0.11
CTSB-228ENST00000533455 CTSLP07711 333 aa15.74■□□□□ 0.11
CTSB-228ENST00000533455 ACADMP11310 421 aa15.74■□□□□ 0.11
CTSB-228ENST00000533455 GJA1P17302 382 aa15.74■□□□□ 0.11
CTSB-228ENST00000533455 TNNI3P19429 210 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms