RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 DLGAP4Q9Y2H0 992 aa19■□□□□ 0.63
CCS-208ENST00000533244 PTGDR2Q9Y5Y4 395 aa19■□□□□ 0.63
CCS-208ENST00000533244 FLNCQ14315 2725 aa18.99■□□□□ 0.63
CCS-208ENST00000533244 GNG14A0A1W2PPG7 69 aa18.99■□□□□ 0.63
CCS-208ENST00000533244 SLC28A1O00337 649 aa18.99■□□□□ 0.63
CCS-208ENST00000533244 CLPSP04118 112 aa18.99■□□□□ 0.63
CCS-208ENST00000533244 DRD2P14416 443 aa18.99■□□□□ 0.63
CCS-208ENST00000533244 HK2P52789 917 aa18.99■□□□□ 0.63
CCS-208ENST00000533244 CASP8Q14790 479 aa18.99■□□□□ 0.63
CCS-208ENST00000533244 ZNF766Q5HY98 468 aa18.99■□□□□ 0.63
CCS-208ENST00000533244 SPDYAQ5MJ70 313 aa18.99■□□□□ 0.63
CCS-208ENST00000533244 ATCAYQ86WG3 371 aa18.99■□□□□ 0.63
CCS-208ENST00000533244 NUDCD3Q8IVD9 361 aa18.99■□□□□ 0.63
CCS-208ENST00000533244 CLYBLQ8N0X4 340 aa18.99■□□□□ 0.63
CCS-208ENST00000533244 FCRL1Q96LA6 429 aa18.99■□□□□ 0.63
CCS-208ENST00000533244 TAAR6Q96RI8 345 aa18.99■□□□□ 0.63
CCS-208ENST00000533244 EBPLQ9BY08 206 aa18.99■□□□□ 0.63
CCS-208ENST00000533244 STMN4Q9H169 189 aaPredicted RBP18.99■□□□□ 0.63
CCS-208ENST00000533244 LRFN1Q9P244 771 aa18.99■□□□□ 0.63
CCS-208ENST00000533244 YARS2Q9Y2Z4 477 aaKnown RBP18.99■□□□□ 0.63
CCS-208ENST00000533244 TRAF6Q9Y4K3 522 aa18.99■□□□□ 0.63
CCS-208ENST00000533244 TMEM233B4DJY2 109 aa18.98■□□□□ 0.63
CCS-208ENST00000533244 CHEK2O96017 543 aa18.98■□□□□ 0.63
CCS-208ENST00000533244 ANXA4P09525 319 aaPredicted RBP18.98■□□□□ 0.63
CCS-208ENST00000533244 NEFHP12036 1026 aa18.98■□□□□ 0.63
CCS-208ENST00000533244 PORP16435 677 aaPredicted RBP18.98■□□□□ 0.63
CCS-208ENST00000533244 CYB561P49447 251 aa18.98■□□□□ 0.63
CCS-208ENST00000533244 SLC37A1P57057 533 aa18.98■□□□□ 0.63
CCS-208ENST00000533244 ERVK-8P63133 956 aa18.98■□□□□ 0.63
CCS-208ENST00000533244 OC90Q02509 493 aaPredicted RBP18.98■□□□□ 0.63
CCS-208ENST00000533244 ZNF763Q0D2J5 394 aa18.98■□□□□ 0.63
CCS-208ENST00000533244 ZNF750Q32MQ0 723 aa18.98■□□□□ 0.63
CCS-208ENST00000533244 SPINK14Q6IE38 97 aa18.98■□□□□ 0.63
CCS-208ENST00000533244 C16orf47Q6ZP98 133 aaPredicted RBP18.98■□□□□ 0.63
CCS-208ENST00000533244 C9orf40Q8IXQ3 194 aa18.98■□□□□ 0.63
CCS-208ENST00000533244 HORMAD2Q8N7B1 307 aa18.98■□□□□ 0.63
CCS-208ENST00000533244 OR2T11Q8NH01 316 aa18.98■□□□□ 0.63
CCS-208ENST00000533244 NUBPLQ8TB37 319 aa18.98■□□□□ 0.63
CCS-208ENST00000533244 GRHL3Q8TE85 626 aa18.98■□□□□ 0.63
CCS-208ENST00000533244 TLCD1Q96CP7 247 aa18.98■□□□□ 0.63
CCS-208ENST00000533244 CNRIP1Q96F85 164 aaPredicted RBP18.98■□□□□ 0.63
CCS-208ENST00000533244 ZNF681Q96N22 645 aa18.98■□□□□ 0.63
CCS-208ENST00000533244 TMBIM4Q9HC24 238 aa18.98■□□□□ 0.63
CCS-208ENST00000533244 PSME2Q9UL46 239 aa18.98■□□□□ 0.63
CCS-208ENST00000533244 ERVK-19Q9WJR5 959 aa18.98■□□□□ 0.63
CCS-208ENST00000533244 GOLGA6L10A6NI86 522 aa18.97■□□□□ 0.63
CCS-208ENST00000533244 TCP11X1B4DZS4 312 aa18.97■□□□□ 0.63
CCS-208ENST00000533244 RGS14O43566 566 aa18.97■□□□□ 0.63
CCS-208ENST00000533244 OR2J2O76002 312 aa18.97■□□□□ 0.63
CCS-208ENST00000533244 ATP1B1P05026 303 aa18.97■□□□□ 0.63
CCS-208ENST00000533244 CT62P0C5K7 136 aa18.97■□□□□ 0.63
CCS-208ENST00000533244 KCNC4Q03721 635 aa18.97■□□□□ 0.63
CCS-208ENST00000533244 DUSP2Q05923 314 aa18.97■□□□□ 0.63
CCS-208ENST00000533244 FUT7Q11130 342 aa18.97■□□□□ 0.63
CCS-208ENST00000533244 ZNF267Q14586 743 aaPredicted RBP18.97■□□□□ 0.63
CCS-208ENST00000533244 HEPACAMQ14CZ8 416 aa18.97■□□□□ 0.63
CCS-208ENST00000533244 SH2D4BQ5SQS7 431 aa18.97■□□□□ 0.63
CCS-208ENST00000533244 ZNF324BQ6AW86 544 aaPredicted RBP18.97■□□□□ 0.63
CCS-208ENST00000533244 NOXRED1Q6NXP6 359 aa18.97■□□□□ 0.63
CCS-208ENST00000533244 GALNT12Q8IXK2 581 aa18.97■□□□□ 0.63
CCS-208ENST00000533244 OR5L2Q8NGL0 311 aa18.97■□□□□ 0.63
CCS-208ENST00000533244 DOK4Q8TEW6 326 aa18.97■□□□□ 0.63
CCS-208ENST00000533244 TWIST2Q8WVJ9 160 aa18.97■□□□□ 0.63
CCS-208ENST00000533244 FAR1Q8WVX9 515 aa18.97■□□□□ 0.63
CCS-208ENST00000533244 KLHL29Q96CT2 875 aa18.97■□□□□ 0.63
CCS-208ENST00000533244 RASL10BQ96S79 203 aa18.97■□□□□ 0.63
CCS-208ENST00000533244 CNPPD1Q9BV87 410 aa18.97■□□□□ 0.63
CCS-208ENST00000533244 HES7Q9BYE0 225 aa18.97■□□□□ 0.63
CCS-208ENST00000533244 LIN28AQ9H9Z2 209 aaKnown RBP18.97■□□□□ 0.63
CCS-208ENST00000533244 MYNNQ9NPC7 610 aa18.97■□□□□ 0.63
CCS-208ENST00000533244 AGPAT4Q9NRZ5 378 aa18.97■□□□□ 0.63
CCS-208ENST00000533244 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.97■□□□□ 0.63
CCS-208ENST00000533244 C1orf109Q9NX04 203 aa18.97■□□□□ 0.63
CCS-208ENST00000533244 EHD3Q9NZN3 535 aa18.97■□□□□ 0.63
CCS-208ENST00000533244 FIS1Q9Y3D6 152 aa18.97■□□□□ 0.63
CCS-208ENST00000533244 VPS4BO75351 444 aa18.96■□□□□ 0.63
CCS-208ENST00000533244 SERPINE1P05121 402 aa18.96■□□□□ 0.63
CCS-208ENST00000533244 SP1P08047 785 aa18.96■□□□□ 0.63
CCS-208ENST00000533244 CD46P15529 392 aa18.96■□□□□ 0.63
CCS-208ENST00000533244 CSNK2A2P19784 350 aaPredicted RBP18.96■□□□□ 0.63
CCS-208ENST00000533244 SOX18P35713 384 aa18.96■□□□□ 0.63
CCS-208ENST00000533244 ALDH9A1P49189 494 aa18.96■□□□□ 0.63
CCS-208ENST00000533244 SSR4P51571 173 aa18.96■□□□□ 0.63
CCS-208ENST00000533244 CEBPEQ15744 281 aa18.96■□□□□ 0.63
CCS-208ENST00000533244 MPEG1Q2M385 716 aa18.96■□□□□ 0.63
CCS-208ENST00000533244 FAM71E1Q6IPT2 247 aa18.96■□□□□ 0.63
CCS-208ENST00000533244 GPALPP1Q8IXQ4 340 aa18.96■□□□□ 0.63
CCS-208ENST00000533244 SLX1AQ9BQ83 275 aa18.96■□□□□ 0.63
CCS-208ENST00000533244 LRTM1Q9HBL6 345 aa18.96■□□□□ 0.63
CCS-208ENST00000533244 KCNK9Q9NPC2 374 aa18.96■□□□□ 0.63
CCS-208ENST00000533244 MAP10Q9P2G4 905 aa18.96■□□□□ 0.63
CCS-208ENST00000533244 ZDHHC2Q9UIJ5 367 aa18.96■□□□□ 0.63
CCS-208ENST00000533244 UTS2RQ9UKP6 389 aa18.96■□□□□ 0.63
CCS-208ENST00000533244 VPS4AQ9UN37 437 aa18.96■□□□□ 0.63
CCS-208ENST00000533244 WBP11Q9Y2W2 641 aaKnown RBP18.96■□□□□ 0.63
CCS-208ENST00000533244 POLR3HQ9Y535 204 aaPredicted RBP18.96■□□□□ 0.63
CCS-208ENST00000533244 WDR91A4D1P6 747 aa18.95■□□□□ 0.62
CCS-208ENST00000533244 OR6C76A6NM76 312 aa18.95■□□□□ 0.62
CCS-208ENST00000533244 WWP2O00308 870 aa18.95■□□□□ 0.62
CCS-208ENST00000533244 LSM1O15116 133 aaKnown RBP18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms