RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 CCL4P13236 92 aa17.43■□□□□ 0.38
SMPD1-208ENST00000533123 ZNF10P21506 573 aaPredicted RBP17.43■□□□□ 0.38
SMPD1-208ENST00000533123 ALAS2P22557 587 aa17.43■□□□□ 0.38
SMPD1-208ENST00000533123 CCKBRP32239 447 aa17.43■□□□□ 0.38
SMPD1-208ENST00000533123 CASP9P55211 416 aa17.43■□□□□ 0.38
SMPD1-208ENST00000533123 RUNX2Q13950 521 aa17.43■□□□□ 0.38
SMPD1-208ENST00000533123 FAM53BQ14153 422 aa17.43■□□□□ 0.38
SMPD1-208ENST00000533123 FAM214AQ32MH5 1076 aa17.43■□□□□ 0.38
SMPD1-208ENST00000533123 GARNL3Q5VVW2 1013 aa17.43■□□□□ 0.38
SMPD1-208ENST00000533123 MRM1Q6IN84 353 aaKnown RBP17.43■□□□□ 0.38
SMPD1-208ENST00000533123 ZFP90Q8TF47 636 aa17.43■□□□□ 0.38
SMPD1-208ENST00000533123 ZFAND2BQ8WV99 257 aa17.43■□□□□ 0.38
SMPD1-208ENST00000533123 GORASP2Q9H8Y8 452 aa17.43■□□□□ 0.38
SMPD1-208ENST00000533123 CUTCQ9NTM9 273 aa17.43■□□□□ 0.38
SMPD1-208ENST00000533123 DHCR7Q9UBM7 475 aaKnown RBP17.43■□□□□ 0.38
SMPD1-208ENST00000533123 ACSL6Q9UKU0 697 aa17.43■□□□□ 0.38
SMPD1-208ENST00000533123 SCN2AQ99250 2005 aa17.42■□□□□ 0.38
SMPD1-208ENST00000533123 GFRA3O60609 400 aa17.42■□□□□ 0.38
SMPD1-208ENST00000533123 GPX2P18283 190 aa17.42■□□□□ 0.38
SMPD1-208ENST00000533123 CDCP2Q5VXM1 449 aa17.42■□□□□ 0.38
SMPD1-208ENST00000533123 ENPP6Q6UWR7 440 aa17.42■□□□□ 0.38
SMPD1-208ENST00000533123 SERPINA11Q86U17 422 aa17.42■□□□□ 0.38
SMPD1-208ENST00000533123 FAM47BQ8NA70 645 aa17.42■□□□□ 0.38
SMPD1-208ENST00000533123 FBXO30Q8TB52 745 aa17.42■□□□□ 0.38
SMPD1-208ENST00000533123 NETO1Q8TDF5 533 aa17.42■□□□□ 0.38
SMPD1-208ENST00000533123 FAM162AQ96A26 154 aa17.42■□□□□ 0.38
SMPD1-208ENST00000533123 CTRCQ99895 268 aa17.42■□□□□ 0.38
SMPD1-208ENST00000533123 TMEM121BQ9BXQ6 578 aaPredicted RBP17.42■□□□□ 0.38
SMPD1-208ENST00000533123 SLAMF7Q9NQ25 335 aa17.42■□□□□ 0.38
SMPD1-208ENST00000533123 ENAMQ9NRM1 1142 aa17.42■□□□□ 0.38
SMPD1-208ENST00000533123 RARRES3Q9UL19 164 aa17.42■□□□□ 0.38
SMPD1-208ENST00000533123 A0A1W2PR48 441 aa17.41■□□□□ 0.38
SMPD1-208ENST00000533123 MAGEA13PA6NCF6 341 aa17.41■□□□□ 0.38
SMPD1-208ENST00000533123 ANKRD33BA6NCL7 494 aa17.41■□□□□ 0.38
SMPD1-208ENST00000533123 TM4SF5O14894 197 aa17.41■□□□□ 0.38
SMPD1-208ENST00000533123 RDH16O75452 317 aa17.41■□□□□ 0.38
SMPD1-208ENST00000533123 PRKRAO75569 313 aaKnown RBP17.41■□□□□ 0.38
SMPD1-208ENST00000533123 TIAF1O95411 115 aa17.41■□□□□ 0.38
SMPD1-208ENST00000533123 CAPNS1P04632 268 aa17.41■□□□□ 0.38
SMPD1-208ENST00000533123 ZCCHC18P0CG32 403 aa17.41■□□□□ 0.38
SMPD1-208ENST00000533123 ISXQ2M1V0 245 aa17.41■□□□□ 0.38
SMPD1-208ENST00000533123 NDUFAF5Q5TEU4 345 aa17.41■□□□□ 0.38
SMPD1-208ENST00000533123 ICA1LQ8NDH6 482 aa17.41■□□□□ 0.38
SMPD1-208ENST00000533123 ADCY4Q8NFM4 1077 aa17.41■□□□□ 0.38
SMPD1-208ENST00000533123 RNF145Q96MT1 663 aa17.41■□□□□ 0.38
SMPD1-208ENST00000533123 NDC1Q9BTX1 674 aa17.41■□□□□ 0.38
SMPD1-208ENST00000533123 TRIM4Q9C037 500 aa17.41■□□□□ 0.38
SMPD1-208ENST00000533123 AGPAT4Q9NRZ5 378 aa17.41■□□□□ 0.38
SMPD1-208ENST00000533123 NDOR1Q9UHB4 597 aa17.41■□□□□ 0.38
SMPD1-208ENST00000533123 DAPP1Q9UN19 280 aa17.41■□□□□ 0.38
SMPD1-208ENST00000533123 A0A1W2PRB8 838 aa17.41■□□□□ 0.38
SMPD1-208ENST00000533123 WASHC1A8K0Z3 465 aa17.41■□□□□ 0.38
SMPD1-208ENST00000533123 HNRNPRO43390 633 aaKnown RBP17.41■□□□□ 0.38
SMPD1-208ENST00000533123 CREG1O75629 220 aa17.41■□□□□ 0.38
SMPD1-208ENST00000533123 KCNK5O95279 499 aa17.41■□□□□ 0.38
SMPD1-208ENST00000533123 NUDT7P0C024 238 aa17.41■□□□□ 0.38
SMPD1-208ENST00000533123 FTH1P19P0C7X4 201 aa17.41■□□□□ 0.38
SMPD1-208ENST00000533123 LIM2P55344 173 aa17.41■□□□□ 0.38
SMPD1-208ENST00000533123 TRA2BP62995 288 aaKnown RBP17.41■□□□□ 0.38
SMPD1-208ENST00000533123 SIM1P81133 766 aaPredicted RBP17.41■□□□□ 0.38
SMPD1-208ENST00000533123 HEPACAMQ14CZ8 416 aa17.41■□□□□ 0.38
SMPD1-208ENST00000533123 ADRM1Q16186 407 aa17.41■□□□□ 0.38
SMPD1-208ENST00000533123 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.41■□□□□ 0.38
SMPD1-208ENST00000533123 C18orf63Q68DL7 685 aa17.41■□□□□ 0.38
SMPD1-208ENST00000533123 PWWP2BQ6NUJ5 590 aa17.41■□□□□ 0.38
SMPD1-208ENST00000533123 ANGPTL8Q6UXH0 198 aa17.41■□□□□ 0.38
SMPD1-208ENST00000533123 PTOV1Q86YD1 416 aa17.41■□□□□ 0.38
SMPD1-208ENST00000533123 ZZZ3Q8IYH5 903 aa17.41■□□□□ 0.38
SMPD1-208ENST00000533123 GALNT4Q8N4A0 578 aa17.41■□□□□ 0.38
SMPD1-208ENST00000533123 BMPERQ8N8U9 685 aa17.41■□□□□ 0.38
SMPD1-208ENST00000533123 OR5AK3PQ8NH89 298 aa17.41■□□□□ 0.38
SMPD1-208ENST00000533123 GOT1L1Q8NHS2 421 aaPredicted RBP17.41■□□□□ 0.38
SMPD1-208ENST00000533123 EME1Q96AY2 570 aa17.41■□□□□ 0.38
SMPD1-208ENST00000533123 MMABQ96EY8 250 aaPredicted RBP17.41■□□□□ 0.38
SMPD1-208ENST00000533123 CMKLR1Q99788 373 aa17.41■□□□□ 0.38
SMPD1-208ENST00000533123 SLC35A5Q9BS91 424 aa17.41■□□□□ 0.38
SMPD1-208ENST00000533123 KCMF1Q9P0J7 381 aa17.41■□□□□ 0.38
SMPD1-208ENST00000533123 ZNF282Q9UDV7 671 aaPredicted RBP17.41■□□□□ 0.38
SMPD1-208ENST00000533123 PCDHGB4Q9UN71 923 aa17.41■□□□□ 0.38
SMPD1-208ENST00000533123 TMEM184BQ9Y519 407 aaPredicted RBP17.41■□□□□ 0.38
SMPD1-208ENST00000533123 GLOD5A6NK44 160 aa17.4■□□□□ 0.38
SMPD1-208ENST00000533123 CSO75390 466 aaKnown RBP17.4■□□□□ 0.38
SMPD1-208ENST00000533123 MT-CO3P00414 261 aa17.4■□□□□ 0.38
SMPD1-208ENST00000533123 UMPSP11172 480 aa17.4■□□□□ 0.38
SMPD1-208ENST00000533123 GCGRP47871 477 aa17.4■□□□□ 0.38
SMPD1-208ENST00000533123 EMP3P54852 163 aa17.4■□□□□ 0.38
SMPD1-208ENST00000533123 NKG7Q16617 165 aa17.4■□□□□ 0.38
SMPD1-208ENST00000533123 HES3Q5TGS1 186 aa17.4■□□□□ 0.38
SMPD1-208ENST00000533123 GALNT10Q86SR1 603 aa17.4■□□□□ 0.38
SMPD1-208ENST00000533123 PPP1R3BQ86XI6 285 aa17.4■□□□□ 0.38
SMPD1-208ENST00000533123 EXOSC8Q96B26 276 aaKnown RBP17.4■□□□□ 0.38
SMPD1-208ENST00000533123 CIB1Q99828 191 aa17.4■□□□□ 0.38
SMPD1-208ENST00000533123 CHID1Q9BWS9 393 aa17.4■□□□□ 0.38
SMPD1-208ENST00000533123 GPATCH2Q9NW75 528 aa17.4■□□□□ 0.38
SMPD1-208ENST00000533123 MAU2Q9Y6X3 613 aa17.4■□□□□ 0.38
SMPD1-208ENST00000533123 PROM1O43490 865 aa17.4■□□□□ 0.38
SMPD1-208ENST00000533123 NSA2O95478 260 aaKnown RBP17.4■□□□□ 0.38
SMPD1-208ENST00000533123 CSRP1P21291 193 aaKnown RBP17.4■□□□□ 0.38
SMPD1-208ENST00000533123 MAT1AQ00266 395 aaKnown RBP17.4■□□□□ 0.38
SMPD1-208ENST00000533123 LRRC74AQ0VAA2 488 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms