RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 CSTF3Q12996 717 aaKnown RBP28.04■■■□□ 2.08
SSSCA1-207ENST00000533115 CCDC153Q494R4 210 aa28.04■■■□□ 2.08
SSSCA1-207ENST00000533115 OPN5Q6U736 354 aa28.04■■■□□ 2.08
SSSCA1-207ENST00000533115 GHDCQ8N2G8 530 aa28.04■■■□□ 2.08
SSSCA1-207ENST00000533115 ZFP62Q8NB50 900 aaPredicted RBP28.04■■■□□ 2.08
SSSCA1-207ENST00000533115 MAGED4Q96JG8 741 aa28.04■■■□□ 2.08
SSSCA1-207ENST00000533115 GRID1Q9ULK0 1009 aa28.04■■■□□ 2.08
SSSCA1-207ENST00000533115 ZNF835Q9Y2P0 537 aa28.04■■■□□ 2.08
SSSCA1-207ENST00000533115 PCDHA9Q9Y5H5 950 aa28.04■■■□□ 2.08
SSSCA1-207ENST00000533115 MAST4O15021 2626 aa28.04■■■□□ 2.08
SSSCA1-207ENST00000533115 A0A1W2PS29 197 aa28.03■■■□□ 2.08
SSSCA1-207ENST00000533115 CDH16O75309 829 aa28.03■■■□□ 2.08
SSSCA1-207ENST00000533115 ENO1P06733 434 aaKnown RBP28.03■■■□□ 2.08
SSSCA1-207ENST00000533115 CASP6P55212 293 aa28.03■■■□□ 2.08
SSSCA1-207ENST00000533115 SLC37A1P57057 533 aa28.03■■■□□ 2.08
SSSCA1-207ENST00000533115 ZNF750Q32MQ0 723 aa28.03■■■□□ 2.08
SSSCA1-207ENST00000533115 RNF111Q6ZNA4 994 aa28.03■■■□□ 2.08
SSSCA1-207ENST00000533115 RTL4Q6ZR62 310 aa28.03■■■□□ 2.08
SSSCA1-207ENST00000533115 C1orf52Q8N6N3 182 aaKnown RBP28.03■■■□□ 2.08
SSSCA1-207ENST00000533115 CCNYL1Q8N7R7 359 aa28.03■■■□□ 2.08
SSSCA1-207ENST00000533115 C16orf52Q8NHV5 167 aa28.03■■■□□ 2.08
SSSCA1-207ENST00000533115 DEPPQ9NTK1 212 aa28.03■■■□□ 2.08
SSSCA1-207ENST00000533115 SH3BGRL2Q9UJC5 107 aa28.03■■■□□ 2.08
SSSCA1-207ENST00000533115 CROCCQ5TZA2 2017 aa28.02■■■□□ 2.08
SSSCA1-207ENST00000533115 C1orf226A1L170 272 aa28.02■■■□□ 2.08
SSSCA1-207ENST00000533115 TFECO14948 347 aaPredicted RBP28.02■■■□□ 2.08
SSSCA1-207ENST00000533115 PLIN3O60664 434 aa28.02■■■□□ 2.08
SSSCA1-207ENST00000533115 ESRRBO95718 433 aa28.02■■■□□ 2.08
SSSCA1-207ENST00000533115 XKP51811 444 aa28.02■■■□□ 2.08
SSSCA1-207ENST00000533115 VSNL1P62760 191 aa28.02■■■□□ 2.08
SSSCA1-207ENST00000533115 BNC2Q6ZN30 1099 aaPredicted RBP28.02■■■□□ 2.08
SSSCA1-207ENST00000533115 SLC29A4Q7RTT9 530 aa28.02■■■□□ 2.08
SSSCA1-207ENST00000533115 SPPL2CQ8IUH8 684 aa28.02■■■□□ 2.08
SSSCA1-207ENST00000533115 GBP7Q8N8V2 638 aaPredicted RBP28.02■■■□□ 2.08
SSSCA1-207ENST00000533115 GOLM1Q8NBJ4 401 aa28.02■■■□□ 2.08
SSSCA1-207ENST00000533115 SLC22A8Q8TCC7 542 aa28.02■■■□□ 2.08
SSSCA1-207ENST00000533115 CHTF18Q8WVB6 975 aa28.02■■■□□ 2.08
SSSCA1-207ENST00000533115 TM4SF18Q96CE8 201 aa28.02■■■□□ 2.08
SSSCA1-207ENST00000533115 SGCZQ96LD1 299 aa28.02■■■□□ 2.08
SSSCA1-207ENST00000533115 CXorf21Q9HAI6 301 aa28.02■■■□□ 2.08
SSSCA1-207ENST00000533115 OR6C76A6NM76 312 aa28.01■■■□□ 2.07
SSSCA1-207ENST00000533115 CCL21O00585 134 aa28.01■■■□□ 2.07
SSSCA1-207ENST00000533115 C3AR1Q16581 482 aa28.01■■■□□ 2.07
SSSCA1-207ENST00000533115 SLC48A1Q6P1K1 146 aa28.01■■■□□ 2.07
SSSCA1-207ENST00000533115 Q6ZPB1 254 aaPredicted RBP28.01■■■□□ 2.07
SSSCA1-207ENST00000533115 SLC15A4Q8N697 577 aa28.01■■■□□ 2.07
SSSCA1-207ENST00000533115 AGAP11Q8TF27 550 aa28.01■■■□□ 2.07
SSSCA1-207ENST00000533115 ACPTQ9BZG2 426 aa28.01■■■□□ 2.07
SSSCA1-207ENST00000533115 SUCOQ9UBS9 1254 aaKnown RBP28.01■■■□□ 2.07
SSSCA1-207ENST00000533115 CES1P1Q9UKY3 287 aa28.01■■■□□ 2.07
SSSCA1-207ENST00000533115 MYO7BQ6PIF6 2116 aa28.01■■■□□ 2.07
SSSCA1-207ENST00000533115 CCDC151A5D8V7 595 aa28■■■□□ 2.07
SSSCA1-207ENST00000533115 COPEO14579 308 aa28■■■□□ 2.07
SSSCA1-207ENST00000533115 NADKO95544 446 aaPredicted RBP28■■■□□ 2.07
SSSCA1-207ENST00000533115 CLPSP04118 112 aa28■■■□□ 2.07
SSSCA1-207ENST00000533115 CPMP14384 443 aa28■■■□□ 2.07
SSSCA1-207ENST00000533115 CHN1P15882 459 aa28■■■□□ 2.07
SSSCA1-207ENST00000533115 KRT4P19013 534 aa28■■■□□ 2.07
SSSCA1-207ENST00000533115 HTR6P50406 440 aa28■■■□□ 2.07
SSSCA1-207ENST00000533115 NAA20P61599 178 aa28■■■□□ 2.07
SSSCA1-207ENST00000533115 TRA2BP62995 288 aaKnown RBP28■■■□□ 2.07
SSSCA1-207ENST00000533115 HSF1Q00613 529 aa28■■■□□ 2.07
SSSCA1-207ENST00000533115 GALNT12Q8IXK2 581 aa28■■■□□ 2.07
SSSCA1-207ENST00000533115 OR2M7Q8NG81 312 aa28■■■□□ 2.07
SSSCA1-207ENST00000533115 RDH11Q8TC12 318 aa28■■■□□ 2.07
SSSCA1-207ENST00000533115 GAL3ST4Q96RP7 486 aa28■■■□□ 2.07
SSSCA1-207ENST00000533115 KCNA7Q96RP8 456 aa28■■■□□ 2.07
SSSCA1-207ENST00000533115 WWTR1Q9GZV5 400 aa28■■■□□ 2.07
SSSCA1-207ENST00000533115 MID1IP1Q9NPA3 183 aa28■■■□□ 2.07
SSSCA1-207ENST00000533115 TIMM22Q9Y584 194 aa28■■■□□ 2.07
SSSCA1-207ENST00000533115 NAV2Q8IVL1 2488 aa27.99■■■□□ 2.07
SSSCA1-207ENST00000533115 UBFD1O14562 309 aaKnown RBP27.99■■■□□ 2.07
SSSCA1-207ENST00000533115 HS6ST1O60243 411 aa27.99■■■□□ 2.07
SSSCA1-207ENST00000533115 PORP16435 677 aaPredicted RBP27.99■■■□□ 2.07
SSSCA1-207ENST00000533115 PTGER1P34995 402 aa27.99■■■□□ 2.07
SSSCA1-207ENST00000533115 NAGLUP54802 743 aa27.99■■■□□ 2.07
SSSCA1-207ENST00000533115 DNAJB13P59910 316 aa27.99■■■□□ 2.07
SSSCA1-207ENST00000533115 EBPQ15125 230 aaKnown RBP27.99■■■□□ 2.07
SSSCA1-207ENST00000533115 MTFR2Q6P444 385 aa27.99■■■□□ 2.07
SSSCA1-207ENST00000533115 MMP21Q8N119 569 aa27.99■■■□□ 2.07
SSSCA1-207ENST00000533115 OR2W6PQ8NHA6 318 aa27.99■■■□□ 2.07
SSSCA1-207ENST00000533115 FAIM2Q9BWQ8 316 aa27.99■■■□□ 2.07
SSSCA1-207ENST00000533115 C12orf65Q9H3J6 166 aaKnown RBP27.99■■■□□ 2.07
SSSCA1-207ENST00000533115 MCM8Q9UJA3 840 aa27.99■■■□□ 2.07
SSSCA1-207ENST00000533115 TINAGQ9UJW2 476 aa27.99■■■□□ 2.07
SSSCA1-207ENST00000533115 TLDC2A0PJX2 215 aa27.98■■■□□ 2.07
SSSCA1-207ENST00000533115 PINLYPA6NC86 204 aa27.98■■■□□ 2.07
SSSCA1-207ENST00000533115 CT62P0C5K7 136 aa27.98■■■□□ 2.07
SSSCA1-207ENST00000533115 ABOP16442 354 aa27.98■■■□□ 2.07
SSSCA1-207ENST00000533115 CNR1P21554 472 aa27.98■■■□□ 2.07
SSSCA1-207ENST00000533115 SSTR4P31391 388 aa27.98■■■□□ 2.07
SSSCA1-207ENST00000533115 DEKP35659 375 aaKnown RBP27.98■■■□□ 2.07
SSSCA1-207ENST00000533115 SLC18A2Q05940 514 aa27.98■■■□□ 2.07
SSSCA1-207ENST00000533115 FUT7Q11130 342 aa27.98■■■□□ 2.07
SSSCA1-207ENST00000533115 ZNF791Q3KP31 576 aaPredicted RBP27.98■■■□□ 2.07
SSSCA1-207ENST00000533115 LYPD8Q6UX82 237 aa27.98■■■□□ 2.07
SSSCA1-207ENST00000533115 FRMD7Q6ZUT3 714 aa27.98■■■□□ 2.07
SSSCA1-207ENST00000533115 CHERPQ8IWX8 916 aaKnown RBP27.98■■■□□ 2.07
SSSCA1-207ENST00000533115 C4orf33Q8N1A6 199 aa27.98■■■□□ 2.07
SSSCA1-207ENST00000533115 CCDC63Q8NA47 563 aa27.98■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms