RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 VPS29Q9UBQ0 182 aa15.95■□□□□ 0.14
PHRF1-204ENST00000532550 TINAGQ9UJW2 476 aa15.95■□□□□ 0.14
PHRF1-204ENST00000532550 STK38LQ9Y2H1 464 aa15.95■□□□□ 0.14
PHRF1-204ENST00000532550 NOTCH2Q04721 2471 aa15.94■□□□□ 0.14
PHRF1-204ENST00000532550 OR6C76A6NM76 312 aa15.94■□□□□ 0.14
PHRF1-204ENST00000532550 MANBAO00462 879 aa15.94■□□□□ 0.14
PHRF1-204ENST00000532550 PRRG2O14669 202 aa15.94■□□□□ 0.14
PHRF1-204ENST00000532550 CDC40O60508 579 aaKnown RBP eCLIP15.94■□□□□ 0.14
PHRF1-204ENST00000532550 ZNF354AO60765 605 aaPredicted RBP15.94■□□□□ 0.14
PHRF1-204ENST00000532550 ULK1O75385 1050 aa15.94■□□□□ 0.14
PHRF1-204ENST00000532550 P04436 131 aa15.94■□□□□ 0.14
PHRF1-204ENST00000532550 HSD3B1P14060 373 aa15.94■□□□□ 0.14
PHRF1-204ENST00000532550 KRT15P19012 456 aa15.94■□□□□ 0.14
PHRF1-204ENST00000532550 HSD3B2P26439 372 aa15.94■□□□□ 0.14
PHRF1-204ENST00000532550 HMOX2P30519 316 aa15.94■□□□□ 0.14
PHRF1-204ENST00000532550 CCT5P48643 541 aa15.94■□□□□ 0.14
PHRF1-204ENST00000532550 HSF1Q00613 529 aa15.94■□□□□ 0.14
PHRF1-204ENST00000532550 PAOXQ6QHF9 649 aa15.94■□□□□ 0.14
PHRF1-204ENST00000532550 RPTNQ6XPR3 784 aa15.94■□□□□ 0.14
PHRF1-204ENST00000532550 MRGPRGQ86SM5 289 aa15.94■□□□□ 0.14
PHRF1-204ENST00000532550 SLC15A4Q8N697 577 aa15.94■□□□□ 0.14
PHRF1-204ENST00000532550 OR2M7Q8NG81 312 aa15.94■□□□□ 0.14
PHRF1-204ENST00000532550 MZB1Q8WU39 189 aa15.94■□□□□ 0.14
PHRF1-204ENST00000532550 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.94■□□□□ 0.14
PHRF1-204ENST00000532550 CCDC126Q96EE4 140 aa15.94■□□□□ 0.14
PHRF1-204ENST00000532550 L3HYPDHQ96EM0 354 aa15.94■□□□□ 0.14
PHRF1-204ENST00000532550 GAL3ST4Q96RP7 486 aa15.94■□□□□ 0.14
PHRF1-204ENST00000532550 ZNF382Q96SR6 550 aa15.94■□□□□ 0.14
PHRF1-204ENST00000532550 PPCSQ9HAB8 311 aa15.94■□□□□ 0.14
PHRF1-204ENST00000532550 SACM1LQ9NTJ5 587 aa15.94■□□□□ 0.14
PHRF1-204ENST00000532550 DEPPQ9NTK1 212 aa15.94■□□□□ 0.14
PHRF1-204ENST00000532550 PSME2Q9UL46 239 aa15.94■□□□□ 0.14
PHRF1-204ENST00000532550 CENPEQ02224 2701 aa15.94■□□□□ 0.14
PHRF1-204ENST00000532550 C1orf226A1L170 272 aa15.93■□□□□ 0.14
PHRF1-204ENST00000532550 CCDC151A5D8V7 595 aa15.93■□□□□ 0.14
PHRF1-204ENST00000532550 ACOT7O00154 380 aa15.93■□□□□ 0.14
PHRF1-204ENST00000532550 ZNHIT1O43257 154 aa15.93■□□□□ 0.14
PHRF1-204ENST00000532550 GLRA3O75311 464 aa15.93■□□□□ 0.14
PHRF1-204ENST00000532550 SHBGP04278 402 aa15.93■□□□□ 0.14
PHRF1-204ENST00000532550 TNFRSF8P28908 595 aa15.93■□□□□ 0.14
PHRF1-204ENST00000532550 PTGER1P34995 402 aa15.93■□□□□ 0.14
PHRF1-204ENST00000532550 DCTP40126 519 aa15.93■□□□□ 0.14
PHRF1-204ENST00000532550 SLCO1A2P46721 670 aa15.93■□□□□ 0.14
PHRF1-204ENST00000532550 SMSP52788 366 aa15.93■□□□□ 0.14
PHRF1-204ENST00000532550 PKNOX1P55347 436 aa15.93■□□□□ 0.14
PHRF1-204ENST00000532550 SLC37A1P57057 533 aa15.93■□□□□ 0.14
PHRF1-204ENST00000532550 PPIAP62937 165 aaKnown RBP15.93■□□□□ 0.14
PHRF1-204ENST00000532550 GALNT1Q10472 559 aaPredicted RBP15.93■□□□□ 0.14
PHRF1-204ENST00000532550 TBL3Q12788 808 aaKnown RBP15.93■□□□□ 0.14
PHRF1-204ENST00000532550 C6orf163Q5TEZ5 329 aa15.93■□□□□ 0.14
PHRF1-204ENST00000532550 HLA-DQA1Q5Y7H0 255 aa15.93■□□□□ 0.14
PHRF1-204ENST00000532550 ZNF787Q6DD87 383 aa15.93■□□□□ 0.14
PHRF1-204ENST00000532550 RGS9BPQ6ZS82 235 aa15.93■□□□□ 0.14
PHRF1-204ENST00000532550 GK5Q6ZS86 529 aa15.93■□□□□ 0.14
PHRF1-204ENST00000532550 FAM47EQ6ZV65 393 aa15.93■□□□□ 0.14
PHRF1-204ENST00000532550 GALNT12Q8IXK2 581 aa15.93■□□□□ 0.14
PHRF1-204ENST00000532550 EID3Q8N140 333 aa15.93■□□□□ 0.14
PHRF1-204ENST00000532550 ZNF808Q8N4W9 903 aaPredicted RBP15.93■□□□□ 0.14
PHRF1-204ENST00000532550 CCNYL1Q8N7R7 359 aa15.93■□□□□ 0.14
PHRF1-204ENST00000532550 OR52N2Q8NGI0 321 aa15.93■□□□□ 0.14
PHRF1-204ENST00000532550 TM4SF18Q96CE8 201 aa15.93■□□□□ 0.14
PHRF1-204ENST00000532550 HBEGFQ99075 208 aa15.93■□□□□ 0.14
PHRF1-204ENST00000532550 FAM173AQ9BQD7 235 aa15.93■□□□□ 0.14
PHRF1-204ENST00000532550 DEFB127Q9H1M4 99 aa15.93■□□□□ 0.14
PHRF1-204ENST00000532550 CXorf21Q9HAI6 301 aa15.93■□□□□ 0.14
PHRF1-204ENST00000532550 RYDENQ9NUL5 291 aaKnown RBP15.93■□□□□ 0.14
PHRF1-204ENST00000532550 GRID1Q9ULK0 1009 aa15.93■□□□□ 0.14
PHRF1-204ENST00000532550 PCDHA9Q9Y5H5 950 aa15.93■□□□□ 0.14
PHRF1-204ENST00000532550 DNAJC13O75165 2243 aa15.92■□□□□ 0.14
PHRF1-204ENST00000532550 ZNF407Q9C0G0 2248 aa15.92■□□□□ 0.14
PHRF1-204ENST00000532550 UNC79Q9P2D8 2635 aa15.92■□□□□ 0.14
PHRF1-204ENST00000532550 A0A1B0GTH9 108 aa15.92■□□□□ 0.14
PHRF1-204ENST00000532550 C2orf92A0A1B0GVN3 265 aa15.92■□□□□ 0.14
PHRF1-204ENST00000532550 PINLYPA6NC86 204 aa15.92■□□□□ 0.14
PHRF1-204ENST00000532550 SMIM23A6NLE4 172 aa15.92■□□□□ 0.14
PHRF1-204ENST00000532550 PRSS44E7EML9 344 aa15.92■□□□□ 0.14
PHRF1-204ENST00000532550 G3V3Y1 287 aa15.92■□□□□ 0.14
PHRF1-204ENST00000532550 PDE9AO76083 593 aa15.92■□□□□ 0.14
PHRF1-204ENST00000532550 MYL2P10916 166 aa15.92■□□□□ 0.14
PHRF1-204ENST00000532550 CPMP14384 443 aa15.92■□□□□ 0.14
PHRF1-204ENST00000532550 PORP16435 677 aaPredicted RBP15.92■□□□□ 0.14
PHRF1-204ENST00000532550 NT5EP21589 574 aa15.92■□□□□ 0.14
PHRF1-204ENST00000532550 SERPINB3P29508 390 aa15.92■□□□□ 0.14
PHRF1-204ENST00000532550 PTGS2P35354 604 aa15.92■□□□□ 0.14
PHRF1-204ENST00000532550 NAA20P61599 178 aa15.92■□□□□ 0.14
PHRF1-204ENST00000532550 TRA2BP62995 288 aaKnown RBP15.92■□□□□ 0.14
PHRF1-204ENST00000532550 CSTF3Q12996 717 aaKnown RBP15.92■□□□□ 0.14
PHRF1-204ENST00000532550 LCP2Q13094 533 aa15.92■□□□□ 0.14
PHRF1-204ENST00000532550 ART3Q13508 389 aa15.92■□□□□ 0.14
PHRF1-204ENST00000532550 CCDC153Q494R4 210 aa15.92■□□□□ 0.14
PHRF1-204ENST00000532550 CMPK2Q5EBM0 449 aa15.92■□□□□ 0.14
PHRF1-204ENST00000532550 TCHHL1Q5QJ38 904 aaPredicted RBP15.92■□□□□ 0.14
PHRF1-204ENST00000532550 SLC22A10Q63ZE4 541 aa15.92■□□□□ 0.14
PHRF1-204ENST00000532550 SP5Q6BEB4 398 aaPredicted RBP15.92■□□□□ 0.14
PHRF1-204ENST00000532550 XKRXQ6PP77 449 aa15.92■□□□□ 0.14
PHRF1-204ENST00000532550 SLC22A16Q86VW1 577 aa15.92■□□□□ 0.14
PHRF1-204ENST00000532550 TDRPQ86YL5 185 aa15.92■□□□□ 0.14
PHRF1-204ENST00000532550 DOLPP1Q86YN1 238 aa15.92■□□□□ 0.14
PHRF1-204ENST00000532550 DND1Q8IYX4 353 aaKnown RBP15.92■□□□□ 0.14
PHRF1-204ENST00000532550 TAGAPQ8N103 731 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms