RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 SMG1Q96Q15 3661 aaKnown RBP13.5□□□□□ -0.25
CPSF1-206ENST00000531480 C17orf105B2RV13 164 aa13.49□□□□□ -0.25
CPSF1-206ENST00000531480 TCP11X1B4DZS4 312 aa13.49□□□□□ -0.25
CPSF1-206ENST00000531480 MKRN2OSH3BPM6 223 aa13.49□□□□□ -0.25
CPSF1-206ENST00000531480 NDUFAB1O14561 156 aa13.49□□□□□ -0.25
CPSF1-206ENST00000531480 EDF1O60869 148 aaKnown RBP13.49□□□□□ -0.25
CPSF1-206ENST00000531480 CELA2AP08217 269 aa13.49□□□□□ -0.25
CPSF1-206ENST00000531480 FAM87AP0C7U9 286 aa13.49□□□□□ -0.25
CPSF1-206ENST00000531480 ITGAMP11215 1152 aa13.49□□□□□ -0.25
CPSF1-206ENST00000531480 PORP16435 677 aaPredicted RBP13.49□□□□□ -0.25
CPSF1-206ENST00000531480 LBPP18428 481 aa13.49□□□□□ -0.25
CPSF1-206ENST00000531480 CSNK2A2P19784 350 aaPredicted RBP13.49□□□□□ -0.25
CPSF1-206ENST00000531480 FRKP42685 505 aaPredicted RBP13.49□□□□□ -0.25
CPSF1-206ENST00000531480 CCL11P51671 97 aa13.49□□□□□ -0.25
CPSF1-206ENST00000531480 XKP51811 444 aa13.49□□□□□ -0.25
CPSF1-206ENST00000531480 C2orf80Q0P641 193 aa13.49□□□□□ -0.25
CPSF1-206ENST00000531480 PRSS53Q2L4Q9 553 aa13.49□□□□□ -0.25
CPSF1-206ENST00000531480 BTBD16Q32M84 506 aa13.49□□□□□ -0.25
CPSF1-206ENST00000531480 VWA5B1Q5TIE3 1220 aa13.49□□□□□ -0.25
CPSF1-206ENST00000531480 IL23RQ5VWK5 629 aa13.49□□□□□ -0.25
CPSF1-206ENST00000531480 EPGNQ6UW88 154 aa13.49□□□□□ -0.25
CPSF1-206ENST00000531480 IGFL3Q6UXB1 125 aa13.49□□□□□ -0.25
CPSF1-206ENST00000531480 RIMKLAQ8IXN7 391 aa13.49□□□□□ -0.25
CPSF1-206ENST00000531480 OR1N1Q8NGS0 311 aa13.49□□□□□ -0.25
CPSF1-206ENST00000531480 OR8K3Q8NH51 312 aa13.49□□□□□ -0.25
CPSF1-206ENST00000531480 SUN3Q8TAQ9 357 aa13.49□□□□□ -0.25
CPSF1-206ENST00000531480 ZNF721Q8TF20 911 aa13.49□□□□□ -0.25
CPSF1-206ENST00000531480 CTHRC1Q96CG8 243 aa13.49□□□□□ -0.25
CPSF1-206ENST00000531480 ABHD17AQ96GS6 310 aa13.49□□□□□ -0.25
CPSF1-206ENST00000531480 RBM18Q96H35 190 aaKnown RBP13.49□□□□□ -0.25
CPSF1-206ENST00000531480 FBXL20Q96IG2 436 aa13.49□□□□□ -0.25
CPSF1-206ENST00000531480 THOC3Q96J01 351 aaKnown RBP13.49□□□□□ -0.25
CPSF1-206ENST00000531480 DGAT2Q96PD7 388 aa13.49□□□□□ -0.25
CPSF1-206ENST00000531480 TSSK3Q96PN8 268 aa13.49□□□□□ -0.25
CPSF1-206ENST00000531480 CXorf21Q9HAI6 301 aa13.49□□□□□ -0.25
CPSF1-206ENST00000531480 SLC35C2Q9NQQ7 365 aa13.49□□□□□ -0.25
CPSF1-206ENST00000531480 GPR83Q9NYM4 423 aa13.49□□□□□ -0.25
CPSF1-206ENST00000531480 C5AR2Q9P296 337 aa13.49□□□□□ -0.25
CPSF1-206ENST00000531480 BAIAP2L1Q9UHR4 511 aa13.49□□□□□ -0.25
CPSF1-206ENST00000531480 ZNF639Q9UID6 485 aa13.49□□□□□ -0.25
CPSF1-206ENST00000531480 UTS2RQ9UKP6 389 aa13.49□□□□□ -0.25
CPSF1-206ENST00000531480 CLCA3PQ9Y6N3 262 aa13.49□□□□□ -0.25
CPSF1-206ENST00000531480 MYOCOSA0A1B0GUC4 107 aa13.48□□□□□ -0.25
CPSF1-206ENST00000531480 MYO1GB0I1T2 1018 aa13.48□□□□□ -0.25
CPSF1-206ENST00000531480 CDK2AP1O14519 115 aa13.48□□□□□ -0.25
CPSF1-206ENST00000531480 ANKRD28O15084 1053 aa13.48□□□□□ -0.25
CPSF1-206ENST00000531480 C1QL1O75973 258 aa13.48□□□□□ -0.25
CPSF1-206ENST00000531480 IFNA16P05015 189 aa13.48□□□□□ -0.25
CPSF1-206ENST00000531480 IFI6P09912 130 aa13.48□□□□□ -0.25
CPSF1-206ENST00000531480 KITP10721 976 aa13.48□□□□□ -0.25
CPSF1-206ENST00000531480 SFTPCP11686 197 aa13.48□□□□□ -0.25
CPSF1-206ENST00000531480 COX7A2P14406 83 aa13.48□□□□□ -0.25
CPSF1-206ENST00000531480 S1PR1P21453 382 aa13.48□□□□□ -0.25
CPSF1-206ENST00000531480 ITGA3P26006 1051 aa13.48□□□□□ -0.25
CPSF1-206ENST00000531480 EPHA3P29320 983 aa13.48□□□□□ -0.25
CPSF1-206ENST00000531480 DUSP2Q05923 314 aa13.48□□□□□ -0.25
CPSF1-206ENST00000531480 MGAT2Q10469 447 aa13.48□□□□□ -0.25
CPSF1-206ENST00000531480 FUT7Q11130 342 aa13.48□□□□□ -0.25
CPSF1-206ENST00000531480 PTGR1Q14914 329 aa13.48□□□□□ -0.25
CPSF1-206ENST00000531480 ZNF750Q32MQ0 723 aa13.48□□□□□ -0.25
CPSF1-206ENST00000531480 SLC9B1Q4ZJI4 515 aa13.48□□□□□ -0.25
CPSF1-206ENST00000531480 CRB2Q5IJ48 1285 aa13.48□□□□□ -0.25
CPSF1-206ENST00000531480 CAMKMTQ7Z624 323 aa13.48□□□□□ -0.25
CPSF1-206ENST00000531480 HPS6Q86YV9 775 aa13.48□□□□□ -0.25
CPSF1-206ENST00000531480 TICAM1Q8IUC6 712 aa13.48□□□□□ -0.25
CPSF1-206ENST00000531480 LGI4Q8N135 537 aa13.48□□□□□ -0.25
CPSF1-206ENST00000531480 LIX1Q8N485 282 aa13.48□□□□□ -0.25
CPSF1-206ENST00000531480 SLC2A12Q8TD20 617 aa13.48□□□□□ -0.25
CPSF1-206ENST00000531480 ZNF675Q8TD23 568 aa13.48□□□□□ -0.25
CPSF1-206ENST00000531480 BCAS4Q8TDM0 211 aa13.48□□□□□ -0.25
CPSF1-206ENST00000531480 KLHL29Q96CT2 875 aa13.48□□□□□ -0.25
CPSF1-206ENST00000531480 VMP1Q96GC9 406 aa13.48□□□□□ -0.25
CPSF1-206ENST00000531480 SENP5Q96HI0 755 aaPredicted RBP13.48□□□□□ -0.25
CPSF1-206ENST00000531480 C1orf50Q9BV19 199 aa13.48□□□□□ -0.25
CPSF1-206ENST00000531480 SLC25A23Q9BV35 468 aa13.48□□□□□ -0.25
CPSF1-206ENST00000531480 REEP4Q9H6H4 257 aa13.48□□□□□ -0.25
CPSF1-206ENST00000531480 MRGBPQ9NV56 204 aa13.48□□□□□ -0.25
CPSF1-206ENST00000531480 ATP6V1HQ9UI12 483 aa13.48□□□□□ -0.25
CPSF1-206ENST00000531480 EIF3LQ9Y262 564 aaKnown RBP13.48□□□□□ -0.25
CPSF1-206ENST00000531480 A8MUA0 341 aa13.47□□□□□ -0.25
CPSF1-206ENST00000531480 ERAL1O75616 437 aaKnown RBP13.47□□□□□ -0.25
CPSF1-206ENST00000531480 PDGFAP04085 211 aa13.47□□□□□ -0.25
CPSF1-206ENST00000531480 CLPSP04118 112 aa13.47□□□□□ -0.25
CPSF1-206ENST00000531480 ALDOCP09972 364 aaKnown RBP13.47□□□□□ -0.25
CPSF1-206ENST00000531480 G6PDP11413 515 aa13.47□□□□□ -0.25
CPSF1-206ENST00000531480 ALDH9A1P49189 494 aa13.47□□□□□ -0.25
CPSF1-206ENST00000531480 DIO3P55073 304 aa13.47□□□□□ -0.25
CPSF1-206ENST00000531480 CLDN8P56748 225 aa13.47□□□□□ -0.25
CPSF1-206ENST00000531480 MAP4K2Q12851 820 aa13.47□□□□□ -0.25
CPSF1-206ENST00000531480 MPEG1Q2M385 716 aa13.47□□□□□ -0.25
CPSF1-206ENST00000531480 PRICKLE4Q2TBC4 344 aa13.47□□□□□ -0.25
CPSF1-206ENST00000531480 AGAP7PQ5VUJ5 663 aa13.47□□□□□ -0.25
CPSF1-206ENST00000531480 SPATA19Q7Z5L4 167 aa13.47□□□□□ -0.25
CPSF1-206ENST00000531480 LRRC25Q8N386 305 aaPredicted RBP13.47□□□□□ -0.25
CPSF1-206ENST00000531480 BRIX1Q8TDN6 353 aaKnown RBP13.47□□□□□ -0.25
CPSF1-206ENST00000531480 RIT1Q92963 219 aa13.47□□□□□ -0.25
CPSF1-206ENST00000531480 NCLNQ969V3 563 aa13.47□□□□□ -0.25
CPSF1-206ENST00000531480 PPWD1Q96BP3 646 aaKnown RBP13.47□□□□□ -0.25
CPSF1-206ENST00000531480 ERP27Q96DN0 273 aa13.47□□□□□ -0.25
CPSF1-206ENST00000531480 ART5Q96L15 291 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms