RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 ID4P47928 161 aa17.85■□□□□ 0.45
SMPD1-205ENST00000531303 CDK9P50750 372 aaKnown RBP17.85■□□□□ 0.45
SMPD1-205ENST00000531303 HBA1P69905 142 aa17.85■□□□□ 0.45
SMPD1-205ENST00000531303 CAPRIN1Q14444 709 aaKnown RBP17.85■□□□□ 0.45
SMPD1-205ENST00000531303 SPRED3Q2MJR0 410 aa17.85■□□□□ 0.45
SMPD1-205ENST00000531303 RINLQ6ZS11 566 aa17.85■□□□□ 0.45
SMPD1-205ENST00000531303 ZNF621Q6ZSS3 439 aa17.85■□□□□ 0.45
SMPD1-205ENST00000531303 MSANTD1Q6ZTZ1 278 aa17.85■□□□□ 0.45
SMPD1-205ENST00000531303 SAMD14Q8IZD0 417 aaPredicted RBP17.85■□□□□ 0.45
SMPD1-205ENST00000531303 CLEC4FQ8N1N0 589 aa17.85■□□□□ 0.45
SMPD1-205ENST00000531303 PCYOX1LQ8NBM8 494 aa17.85■□□□□ 0.45
SMPD1-205ENST00000531303 SUN3Q8TAQ9 357 aa17.85■□□□□ 0.45
SMPD1-205ENST00000531303 KAT2AQ92830 837 aa17.85■□□□□ 0.45
SMPD1-205ENST00000531303 MAGED4Q96JG8 741 aa17.85■□□□□ 0.45
SMPD1-205ENST00000531303 CCDC115Q96NT0 180 aa17.85■□□□□ 0.45
SMPD1-205ENST00000531303 DGAT2Q96PD7 388 aa17.85■□□□□ 0.45
SMPD1-205ENST00000531303 SPSB2Q99619 263 aa17.85■□□□□ 0.45
SMPD1-205ENST00000531303 PNO1Q9NRX1 252 aaKnown RBP17.85■□□□□ 0.45
SMPD1-205ENST00000531303 SLC6A13Q9NSD5 602 aa17.85■□□□□ 0.45
SMPD1-205ENST00000531303 ACSS1Q9NUB1 689 aaPredicted RBP17.85■□□□□ 0.45
SMPD1-205ENST00000531303 CROTQ9UKG9 612 aa17.85■□□□□ 0.45
SMPD1-205ENST00000531303 ERVK-11Q9UQG0 969 aa17.85■□□□□ 0.45
SMPD1-205ENST00000531303 CLDN16Q9Y5I7 305 aa17.85■□□□□ 0.45
SMPD1-205ENST00000531303 KCNH1O95259 989 aa17.84■□□□□ 0.45
SMPD1-205ENST00000531303 TNNI3P19429 210 aa17.84■□□□□ 0.45
SMPD1-205ENST00000531303 SOAT1P35610 550 aa17.84■□□□□ 0.45
SMPD1-205ENST00000531303 FRKP42685 505 aaPredicted RBP17.84■□□□□ 0.45
SMPD1-205ENST00000531303 MNAT1P51948 309 aa17.84■□□□□ 0.45
SMPD1-205ENST00000531303 RPS18P62269 152 aaKnown RBP17.84■□□□□ 0.45
SMPD1-205ENST00000531303 SLC25A3Q00325 362 aa17.84■□□□□ 0.45
SMPD1-205ENST00000531303 RTP5Q14D33 572 aa17.84■□□□□ 0.45
SMPD1-205ENST00000531303 GTDC1Q4AE62 458 aa17.84■□□□□ 0.45
SMPD1-205ENST00000531303 DGAT2L6Q6ZPD8 337 aa17.84■□□□□ 0.45
SMPD1-205ENST00000531303 LANCL3Q6ZV70 420 aa17.84■□□□□ 0.45
SMPD1-205ENST00000531303 MED25Q71SY5 747 aa17.84■□□□□ 0.45
SMPD1-205ENST00000531303 DHDDSQ86SQ9 333 aa17.84■□□□□ 0.45
SMPD1-205ENST00000531303 RBM18Q96H35 190 aaKnown RBP17.84■□□□□ 0.45
SMPD1-205ENST00000531303 SLC39A3Q9BRY0 314 aa17.84■□□□□ 0.45
SMPD1-205ENST00000531303 WDR54Q9H977 334 aa17.84■□□□□ 0.45
SMPD1-205ENST00000531303 THSD1Q9NS62 852 aa17.84■□□□□ 0.45
SMPD1-205ENST00000531303 NXT1Q9UKK6 140 aaKnown RBP17.84■□□□□ 0.45
SMPD1-205ENST00000531303 A0A096LPI6 279 aa17.83■□□□□ 0.45
SMPD1-205ENST00000531303 ALOX12BO75342 701 aa17.83■□□□□ 0.45
SMPD1-205ENST00000531303 SLC35E2P0CK97 266 aa17.83■□□□□ 0.45
SMPD1-205ENST00000531303 CD82P27701 267 aa17.83■□□□□ 0.45
SMPD1-205ENST00000531303 DLSTP36957 453 aa17.83■□□□□ 0.45
SMPD1-205ENST00000531303 IGLV3-21P80748 117 aaPredicted RBP17.83■□□□□ 0.45
SMPD1-205ENST00000531303 SERTAD2Q14140 314 aa17.83■□□□□ 0.45
SMPD1-205ENST00000531303 MAP7Q14244 749 aa17.83■□□□□ 0.45
SMPD1-205ENST00000531303 SPDYE7PQ495Y7 208 aa17.83■□□□□ 0.45
SMPD1-205ENST00000531303 COQ5Q5HYK3 327 aa17.83■□□□□ 0.45
SMPD1-205ENST00000531303 TMEM107Q6UX40 140 aa17.83■□□□□ 0.45
SMPD1-205ENST00000531303 SZRD1Q7Z422 152 aa17.83■□□□□ 0.45
SMPD1-205ENST00000531303 DPP10Q8N608 796 aa17.83■□□□□ 0.45
SMPD1-205ENST00000531303 IL22RA1Q8N6P7 574 aa17.83■□□□□ 0.45
SMPD1-205ENST00000531303 PLPP5Q8NEB5 264 aa17.83■□□□□ 0.45
SMPD1-205ENST00000531303 OR5AK3PQ8NH89 298 aa17.83■□□□□ 0.45
SMPD1-205ENST00000531303 METTL21AQ8WXB1 218 aa17.83■□□□□ 0.45
SMPD1-205ENST00000531303 NXPE2Q96DL1 559 aa17.83■□□□□ 0.45
SMPD1-205ENST00000531303 MESP1Q9BRJ9 268 aa17.83■□□□□ 0.45
SMPD1-205ENST00000531303 PAIP1Q9H074 479 aaKnown RBP17.83■□□□□ 0.45
SMPD1-205ENST00000531303 GID8Q9NWU2 228 aa17.83■□□□□ 0.45
SMPD1-205ENST00000531303 TAS2R9Q9NYW1 312 aa17.83■□□□□ 0.45
SMPD1-205ENST00000531303 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.83■□□□□ 0.45
SMPD1-205ENST00000531303 MAN2B2Q9Y2E5 1009 aa17.83■□□□□ 0.45
SMPD1-205ENST00000531303 IGKV3D-11A0A0A0MRZ8 115 aa17.82■□□□□ 0.44
SMPD1-205ENST00000531303 LOC101059948A0A1B0GTJ6 334 aa17.82■□□□□ 0.44
SMPD1-205ENST00000531303 KLF7O75840 302 aaPredicted RBP17.82■□□□□ 0.44
SMPD1-205ENST00000531303 UNC5CO95185 931 aa17.82■□□□□ 0.44
SMPD1-205ENST00000531303 FOLR3P41439 243 aa17.82■□□□□ 0.44
SMPD1-205ENST00000531303 STAT5AP42229 794 aa17.82■□□□□ 0.44
SMPD1-205ENST00000531303 TRPC1P48995 793 aa17.82■□□□□ 0.44
SMPD1-205ENST00000531303 RPS15P62841 145 aaKnown RBP17.82■□□□□ 0.44
SMPD1-205ENST00000531303 MRPS35P82673 323 aaKnown RBP17.82■□□□□ 0.44
SMPD1-205ENST00000531303 DNASE1L3Q13609 305 aa17.82■□□□□ 0.44
SMPD1-205ENST00000531303 TGIF1Q15583 401 aa17.82■□□□□ 0.44
SMPD1-205ENST00000531303 CEBPEQ15744 281 aa17.82■□□□□ 0.44
SMPD1-205ENST00000531303 TRMT5Q32P41 509 aaKnown RBP17.82■□□□□ 0.44
SMPD1-205ENST00000531303 FAM111BQ6SJ93 734 aa17.82■□□□□ 0.44
SMPD1-205ENST00000531303 IGF2-ASQ6U949 168 aa17.82■□□□□ 0.44
SMPD1-205ENST00000531303 DLEU7Q6UYE1 221 aa17.82■□□□□ 0.44
SMPD1-205ENST00000531303 ST13P4Q8IZP2 240 aaPredicted RBP17.82■□□□□ 0.44
SMPD1-205ENST00000531303 NKD1Q969G9 470 aa17.82■□□□□ 0.44
SMPD1-205ENST00000531303 LRRC58Q96CX6 371 aa17.82■□□□□ 0.44
SMPD1-205ENST00000531303 TRIM8Q9BZR9 551 aa17.82■□□□□ 0.44
SMPD1-205ENST00000531303 CXorf36Q9H7Y0 433 aa17.82■□□□□ 0.44
SMPD1-205ENST00000531303 ANKRA2Q9H9E1 313 aa17.82■□□□□ 0.44
SMPD1-205ENST00000531303 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.82■□□□□ 0.44
SMPD1-205ENST00000531303 VPS4AQ9UN37 437 aa17.82■□□□□ 0.44
SMPD1-205ENST00000531303 FARSAQ9Y285 508 aaKnown RBP17.82■□□□□ 0.44
SMPD1-205ENST00000531303 PADI2Q9Y2J8 665 aa17.82■□□□□ 0.44
SMPD1-205ENST00000531303 PCDHB14Q9Y5E9 798 aa17.82■□□□□ 0.44
SMPD1-205ENST00000531303 IGHV3-20A0A0C4DH32 117 aa17.82■□□□□ 0.44
SMPD1-205ENST00000531303 ERN1O75460 977 aaKnown RBP17.82■□□□□ 0.44
SMPD1-205ENST00000531303 DXOO77932 396 aaKnown RBP17.82■□□□□ 0.44
SMPD1-205ENST00000531303 KRT16P08779 473 aa17.82■□□□□ 0.44
SMPD1-205ENST00000531303 F8A1P23610 371 aa17.82■□□□□ 0.44
SMPD1-205ENST00000531303 MC3RP41968 323 aa17.82■□□□□ 0.44
SMPD1-205ENST00000531303 STT3AP46977 705 aa17.82■□□□□ 0.44
SMPD1-205ENST00000531303 PGDP52209 483 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms