RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 RFC3P40938 356 aa13.13□□□□□ -0.31
CAPN1-212ENST00000527887 ID2Q02363 134 aa13.13□□□□□ -0.31
CAPN1-212ENST00000527887 CEP85LQ5SZL2 805 aa13.13□□□□□ -0.31
CAPN1-212ENST00000527887 LGSNQ5TDP6 509 aa13.13□□□□□ -0.31
CAPN1-212ENST00000527887 AGBL2Q5U5Z8 902 aa13.13□□□□□ -0.31
CAPN1-212ENST00000527887 SLC22A10Q63ZE4 541 aa13.13□□□□□ -0.31
CAPN1-212ENST00000527887 C18orf63Q68DL7 685 aa13.13□□□□□ -0.31
CAPN1-212ENST00000527887 NUDT13Q86X67 352 aa13.13□□□□□ -0.31
CAPN1-212ENST00000527887 OR4N5Q8IXE1 308 aa13.13□□□□□ -0.31
CAPN1-212ENST00000527887 SRRM1Q8IYB3 904 aaKnown RBP13.13□□□□□ -0.31
CAPN1-212ENST00000527887 FAM109AQ8N4B1 249 aa13.13□□□□□ -0.31
CAPN1-212ENST00000527887 ZNF321PQ8N8H1 164 aa13.13□□□□□ -0.31
CAPN1-212ENST00000527887 SCYL1Q96KG9 808 aa13.13□□□□□ -0.31
CAPN1-212ENST00000527887 ZNF717Q9BY31 904 aaPredicted RBP13.13□□□□□ -0.31
CAPN1-212ENST00000527887 TTTY12Q9BZ98 90 aa13.13□□□□□ -0.31
CAPN1-212ENST00000527887 TMBIM4Q9HC24 238 aa13.13□□□□□ -0.31
CAPN1-212ENST00000527887 CPSF2Q9P2I0 782 aaKnown RBP13.13□□□□□ -0.31
CAPN1-212ENST00000527887 ADAM29Q9UKF5 820 aa13.13□□□□□ -0.31
CAPN1-212ENST00000527887 DCHS2Q6V1P9 2916 aa13.13□□□□□ -0.31
CAPN1-212ENST00000527887 MYOCOSA0A1B0GUC4 107 aa13.12□□□□□ -0.31
CAPN1-212ENST00000527887 A0A1B0GVC2 190 aa13.12□□□□□ -0.31
CAPN1-212ENST00000527887 BCKDKO14874 412 aa13.12□□□□□ -0.31
CAPN1-212ENST00000527887 SUSD5O60279 629 aa13.12□□□□□ -0.31
CAPN1-212ENST00000527887 OR10H2O60403 315 aa13.12□□□□□ -0.31
CAPN1-212ENST00000527887 SMIM24O75264 130 aa13.12□□□□□ -0.31
CAPN1-212ENST00000527887 CDH16O75309 829 aa13.12□□□□□ -0.31
CAPN1-212ENST00000527887 ACSL3O95573 720 aa13.12□□□□□ -0.31
CAPN1-212ENST00000527887 IGHG3P01860 377 aa13.12□□□□□ -0.31
CAPN1-212ENST00000527887 SLC35E2P0CK97 266 aa13.12□□□□□ -0.31
CAPN1-212ENST00000527887 NR2F6P10588 404 aa13.12□□□□□ -0.31
CAPN1-212ENST00000527887 SSTR2P30874 369 aa13.12□□□□□ -0.31
CAPN1-212ENST00000527887 CCNG1P51959 295 aa13.12□□□□□ -0.31
CAPN1-212ENST00000527887 HNRNPH2P55795 449 aaKnown RBP13.12□□□□□ -0.31
CAPN1-212ENST00000527887 ASPHQ12797 758 aa13.12□□□□□ -0.31
CAPN1-212ENST00000527887 ZNF750Q32MQ0 723 aa13.12□□□□□ -0.31
CAPN1-212ENST00000527887 ZNF791Q3KP31 576 aaPredicted RBP13.12□□□□□ -0.31
CAPN1-212ENST00000527887 TNFAIP8L3Q5GJ75 292 aa13.12□□□□□ -0.31
CAPN1-212ENST00000527887 FAM47EQ6ZV65 393 aa13.12□□□□□ -0.31
CAPN1-212ENST00000527887 ACAD11Q709F0 780 aa13.12□□□□□ -0.31
CAPN1-212ENST00000527887 SLC29A4Q7RTT9 530 aa13.12□□□□□ -0.31
CAPN1-212ENST00000527887 PAGE2Q7Z2X7 111 aa13.12□□□□□ -0.31
CAPN1-212ENST00000527887 CD163Q86VB7 1156 aa13.12□□□□□ -0.31
CAPN1-212ENST00000527887 RNF175Q8N4F7 328 aa13.12□□□□□ -0.31
CAPN1-212ENST00000527887 PTGR2Q8N8N7 351 aaPredicted RBP13.12□□□□□ -0.31
CAPN1-212ENST00000527887 RIT1Q92963 219 aa13.12□□□□□ -0.31
CAPN1-212ENST00000527887 PPWD1Q96BP3 646 aaKnown RBP13.12□□□□□ -0.31
CAPN1-212ENST00000527887 SDCCAG3Q96C92 435 aa13.12□□□□□ -0.31
CAPN1-212ENST00000527887 PHF21BQ96EK2 531 aa13.12□□□□□ -0.31
CAPN1-212ENST00000527887 MRPL57Q9BQC6 102 aaKnown RBP13.12□□□□□ -0.31
CAPN1-212ENST00000527887 SORBS1Q9BX66 1292 aaKnown RBP13.12□□□□□ -0.31
CAPN1-212ENST00000527887 DEFB127Q9H1M4 99 aa13.12□□□□□ -0.31
CAPN1-212ENST00000527887 NOL11Q9H8H0 719 aaKnown RBP13.12□□□□□ -0.31
CAPN1-212ENST00000527887 CNIH4Q9P003 139 aa13.12□□□□□ -0.31
CAPN1-212ENST00000527887 LGALS13Q9UHV8 139 aa13.12□□□□□ -0.31
CAPN1-212ENST00000527887 RNF11Q9Y3C5 154 aa13.12□□□□□ -0.31
CAPN1-212ENST00000527887 FBN2P35556 2912 aa13.11□□□□□ -0.31
CAPN1-212ENST00000527887 OTOGQ6ZRI0 2925 aa13.11□□□□□ -0.31
CAPN1-212ENST00000527887 A0A1W2PR48 441 aa13.11□□□□□ -0.31
CAPN1-212ENST00000527887 LRRC14BA6NHZ5 514 aa13.11□□□□□ -0.31
CAPN1-212ENST00000527887 CAPN14A8MX76 684 aa13.11□□□□□ -0.31
CAPN1-212ENST00000527887 OR7A17O14581 309 aa13.11□□□□□ -0.31
CAPN1-212ENST00000527887 TMPRSS11DO60235 418 aa13.11□□□□□ -0.31
CAPN1-212ENST00000527887 GUCY1B2O75343 617 aa13.11□□□□□ -0.31
CAPN1-212ENST00000527887 EEDO75530 441 aaKnown RBP13.11□□□□□ -0.31
CAPN1-212ENST00000527887 PDE9AO76083 593 aa13.11□□□□□ -0.31
CAPN1-212ENST00000527887 SIX3O95343 332 aaPredicted RBP13.11□□□□□ -0.31
CAPN1-212ENST00000527887 HOXD4P09016 255 aaPredicted RBP13.11□□□□□ -0.31
CAPN1-212ENST00000527887 SERPINB3P29508 390 aa13.11□□□□□ -0.31
CAPN1-212ENST00000527887 CHRNB4P30926 498 aa13.11□□□□□ -0.31
CAPN1-212ENST00000527887 FOXO1Q12778 655 aa13.11□□□□□ -0.31
CAPN1-212ENST00000527887 IFT88Q13099 833 aa13.11□□□□□ -0.31
CAPN1-212ENST00000527887 SLC10A1Q14973 349 aa13.11□□□□□ -0.31
CAPN1-212ENST00000527887 GGTA1PQ4G0N0 100 aa13.11□□□□□ -0.31
CAPN1-212ENST00000527887 FRG2Q64ET8 278 aa13.11□□□□□ -0.31
CAPN1-212ENST00000527887 OR52E8Q6IFG1 317 aa13.11□□□□□ -0.31
CAPN1-212ENST00000527887 RNF111Q6ZNA4 994 aa13.11□□□□□ -0.31
CAPN1-212ENST00000527887 LCA5Q86VQ0 697 aa13.11□□□□□ -0.31
CAPN1-212ENST00000527887 C9orf40Q8IXQ3 194 aa13.11□□□□□ -0.31
CAPN1-212ENST00000527887 PLD6Q8N2A8 252 aaKnown RBP13.11□□□□□ -0.31
CAPN1-212ENST00000527887 ACBD4Q8NC06 268 aa13.11□□□□□ -0.31
CAPN1-212ENST00000527887 TRPC4APQ8TEL6 797 aa13.11□□□□□ -0.31
CAPN1-212ENST00000527887 PAQR8Q8TEZ7 354 aa13.11□□□□□ -0.31
CAPN1-212ENST00000527887 RND1Q92730 232 aa13.11□□□□□ -0.31
CAPN1-212ENST00000527887 TP53INP1Q96A56 240 aa13.11□□□□□ -0.31
CAPN1-212ENST00000527887 SPACA9Q96E40 222 aaPredicted RBP13.11□□□□□ -0.31
CAPN1-212ENST00000527887 ATP6V1G3Q96LB4 118 aa13.11□□□□□ -0.31
CAPN1-212ENST00000527887 FRG2BQ96QU4 278 aa13.11□□□□□ -0.31
CAPN1-212ENST00000527887 PAFAH2Q99487 392 aa13.11□□□□□ -0.31
CAPN1-212ENST00000527887 ENKD1Q9H0I2 346 aa13.11□□□□□ -0.31
CAPN1-212ENST00000527887 MRPL46Q9H2W6 279 aaKnown RBP13.11□□□□□ -0.31
CAPN1-212ENST00000527887 SH2D2AQ9NP31 389 aa13.11□□□□□ -0.31
CAPN1-212ENST00000527887 NMRK1Q9NWW6 199 aa13.11□□□□□ -0.31
CAPN1-212ENST00000527887 QPCTLQ9NXS2 382 aa13.11□□□□□ -0.31
CAPN1-212ENST00000527887 PINLYPA6NC86 204 aa13.1□□□□□ -0.31
CAPN1-212ENST00000527887 FIGNL2A6NMB9 653 aa13.1□□□□□ -0.31
CAPN1-212ENST00000527887 FAM166BA8MTA8 275 aa13.1□□□□□ -0.31
CAPN1-212ENST00000527887 FAM47E-STBD1D6RA91 191 aa13.1□□□□□ -0.31
CAPN1-212ENST00000527887 AQP7O14520 342 aa13.1□□□□□ -0.31
CAPN1-212ENST00000527887 HCN1O60741 890 aa13.1□□□□□ -0.31
CAPN1-212ENST00000527887 ZNF354AO60765 605 aaPredicted RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms