RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 HNRNPCP07910 306 aaKnown RBP eCLIP14.32□□□□□ -0.12
USP47-207ENST00000527733 PRR23D2P0DMB1 279 aaPredicted RBP14.32□□□□□ -0.12
USP47-207ENST00000527733 UGT2B7P16662 529 aa14.32□□□□□ -0.12
USP47-207ENST00000527733 GPR18Q14330 331 aa14.32□□□□□ -0.12
USP47-207ENST00000527733 Q6ZSR9 355 aa14.32□□□□□ -0.12
USP47-207ENST00000527733 GALNT10Q86SR1 603 aa14.32□□□□□ -0.12
USP47-207ENST00000527733 NAGSQ8N159 534 aa14.32□□□□□ -0.12
USP47-207ENST00000527733 CIDECQ96AQ7 238 aaPredicted RBP14.32□□□□□ -0.12
USP47-207ENST00000527733 ALOXE3Q9BYJ1 711 aa14.32□□□□□ -0.12
USP47-207ENST00000527733 SLC6A16Q9GZN6 736 aa14.32□□□□□ -0.12
USP47-207ENST00000527733 CLMPQ9H6B4 373 aa14.32□□□□□ -0.12
USP47-207ENST00000527733 SMURF2Q9HAU4 748 aa14.32□□□□□ -0.12
USP47-207ENST00000527733 COMMD3-BMI1R4GMX3 469 aa14.32□□□□□ -0.12
USP47-207ENST00000527733 CENPXA8MT69 81 aa14.31□□□□□ -0.12
USP47-207ENST00000527733 AHSA1O95433 338 aa14.31□□□□□ -0.12
USP47-207ENST00000527733 IFI30P13284 250 aa14.31□□□□□ -0.12
USP47-207ENST00000527733 CCR5P51681 352 aa14.31□□□□□ -0.12
USP47-207ENST00000527733 RPS15P62841 145 aaKnown RBP14.31□□□□□ -0.12
USP47-207ENST00000527733 SDR16C5Q8N3Y7 309 aa14.31□□□□□ -0.12
USP47-207ENST00000527733 MFSD2AQ8NA29 543 aa14.31□□□□□ -0.12
USP47-207ENST00000527733 PIP5K1AQ99755 562 aa14.31□□□□□ -0.12
USP47-207ENST00000527733 ADAM29Q9UKF5 820 aa14.31□□□□□ -0.12
USP47-207ENST00000527733 ANTXRLA6NF34 631 aa14.31□□□□□ -0.12
USP47-207ENST00000527733 H0Y8X5 98 aa14.31□□□□□ -0.12
USP47-207ENST00000527733 H0YGG7 62 aa14.31□□□□□ -0.12
USP47-207ENST00000527733 GFYI3L273 518 aa14.31□□□□□ -0.12
USP47-207ENST00000527733 SGK494L7N484 410 aa14.31□□□□□ -0.12
USP47-207ENST00000527733 UBFD1O14562 309 aaKnown RBP14.31□□□□□ -0.12
USP47-207ENST00000527733 ARHGEF9O43307 516 aa14.31□□□□□ -0.12
USP47-207ENST00000527733 HCRTR2O43614 444 aa14.31□□□□□ -0.12
USP47-207ENST00000527733 ACVR2AP27037 513 aa14.31□□□□□ -0.12
USP47-207ENST00000527733 ARF3P61204 181 aaPredicted RBP14.31□□□□□ -0.12
USP47-207ENST00000527733 HTR4Q13639 388 aa14.31□□□□□ -0.12
USP47-207ENST00000527733 BLMHQ13867 455 aa14.31□□□□□ -0.12
USP47-207ENST00000527733 TRIM46Q7Z4K8 759 aa14.31□□□□□ -0.12
USP47-207ENST00000527733 LAPTM4BQ86VI4 370 aa14.31□□□□□ -0.12
USP47-207ENST00000527733 ZSWIM9Q86XI8 627 aa14.31□□□□□ -0.12
USP47-207ENST00000527733 SPEM1Q8N4L4 309 aa14.31□□□□□ -0.12
USP47-207ENST00000527733 MFSD9Q8NBP5 474 aa14.31□□□□□ -0.12
USP47-207ENST00000527733 ZNF740Q8NDX6 193 aa14.31□□□□□ -0.12
USP47-207ENST00000527733 MAGIXQ9H6Y5 334 aa14.31□□□□□ -0.12
USP47-207ENST00000527733 ALKBH4Q9NXW9 302 aa14.31□□□□□ -0.12
USP47-207ENST00000527733 NAALAD2Q9Y3Q0 740 aa14.31□□□□□ -0.12
USP47-207ENST00000527733 PLEKHM1Q9Y4G2 1056 aa14.31□□□□□ -0.12
USP47-207ENST00000527733 SPIN1Q9Y657 262 aaPredicted RBP14.31□□□□□ -0.12
USP47-207ENST00000527733 A0A1B0GVT2 93 aa14.31□□□□□ -0.12
USP47-207ENST00000527733 PLRG1O43660 514 aaKnown RBP14.31□□□□□ -0.12
USP47-207ENST00000527733 NPPBP16860 134 aa14.31□□□□□ -0.12
USP47-207ENST00000527733 PFN3P60673 137 aa14.31□□□□□ -0.12
USP47-207ENST00000527733 ZXDBP98169 803 aa14.31□□□□□ -0.12
USP47-207ENST00000527733 FIGNL1Q6PIW4 674 aa14.31□□□□□ -0.12
USP47-207ENST00000527733 NANOGNBQ7Z5D8 188 aa14.31□□□□□ -0.12
USP47-207ENST00000527733 OR6K6Q8NGW6 343 aa14.31□□□□□ -0.12
USP47-207ENST00000527733 PLA2G2FQ9BZM2 168 aa14.31□□□□□ -0.12
USP47-207ENST00000527733 STARD5Q9NSY2 213 aa14.31□□□□□ -0.12
USP47-207ENST00000527733 MKLN1Q9UL63 735 aa14.31□□□□□ -0.12
USP47-207ENST00000527733 ZFR2Q9UPR6 939 aaKnown RBP14.31□□□□□ -0.12
USP47-207ENST00000527733 LOC285556D6RIA3 1793 aa14.31□□□□□ -0.12
USP47-207ENST00000527733 A0A0G2JPF8 293 aa14.31□□□□□ -0.12
USP47-207ENST00000527733 HNRNPCL3B7ZW38 293 aa14.31□□□□□ -0.12
USP47-207ENST00000527733 HNRNPCL4P0DMR1 293 aa14.31□□□□□ -0.12
USP47-207ENST00000527733 FMO3P31513 532 aa14.31□□□□□ -0.12
USP47-207ENST00000527733 RBM48Q5RL73 367 aaKnown RBP14.31□□□□□ -0.12
USP47-207ENST00000527733 AGBL4Q5VU57 503 aa14.31□□□□□ -0.12
USP47-207ENST00000527733 KLHL24Q6TFL4 600 aa14.31□□□□□ -0.12
USP47-207ENST00000527733 PDSS2Q86YH6 399 aa14.31□□□□□ -0.12
USP47-207ENST00000527733 CDRT4Q8N9R6 151 aa14.31□□□□□ -0.12
USP47-207ENST00000527733 OR10H4Q8NGA5 316 aa14.31□□□□□ -0.12
USP47-207ENST00000527733 MAL2Q969L2 176 aa14.31□□□□□ -0.12
USP47-207ENST00000527733 TCTN2Q96GX1 697 aa14.31□□□□□ -0.12
USP47-207ENST00000527733 TSSK6Q9BXA6 273 aa14.31□□□□□ -0.12
USP47-207ENST00000527733 KCNN2Q9H2S1 579 aa14.31□□□□□ -0.12
USP47-207ENST00000527733 CXorf21Q9HAI6 301 aa14.31□□□□□ -0.12
USP47-207ENST00000527733 TMEM181Q9P2C4 612 aa14.31□□□□□ -0.12
USP47-207ENST00000527733 MKL2Q9ULH7 1088 aa14.31□□□□□ -0.12
USP47-207ENST00000527733 TRMUO75648 421 aaKnown RBP14.3□□□□□ -0.12
USP47-207ENST00000527733 ZNF823P16415 610 aa14.3□□□□□ -0.12
USP47-207ENST00000527733 SFT2D3Q587I9 215 aa14.3□□□□□ -0.12
USP47-207ENST00000527733 RUNDC3AQ59EK9 446 aa14.3□□□□□ -0.12
USP47-207ENST00000527733 MS4A4EQ96PG1 132 aa14.3□□□□□ -0.12
USP47-207ENST00000527733 TRIM2Q9C040 744 aa14.3□□□□□ -0.12
USP47-207ENST00000527733 ZDHHC5Q9C0B5 715 aa14.3□□□□□ -0.12
USP47-207ENST00000527733 TOR3AQ9H497 397 aa14.3□□□□□ -0.12
USP47-207ENST00000527733 MAN2B2Q9Y2E5 1009 aa14.3□□□□□ -0.12
USP47-207ENST00000527733 CAB39Q9Y376 341 aaPredicted RBP14.3□□□□□ -0.12
USP47-207ENST00000527733 AP1M2Q9Y6Q5 423 aa14.3□□□□□ -0.12
USP47-207ENST00000527733 PRAMEF2O60811 474 aa14.3□□□□□ -0.12
USP47-207ENST00000527733 RETP07949 1114 aa14.3□□□□□ -0.12
USP47-207ENST00000527733 TUBB3Q13509 450 aa14.3□□□□□ -0.12
USP47-207ENST00000527733 VEZF1Q14119 521 aa14.3□□□□□ -0.12
USP47-207ENST00000527733 SPRED3Q2MJR0 410 aa14.3□□□□□ -0.12
USP47-207ENST00000527733 KIAA1614Q5VZ46 1190 aa14.3□□□□□ -0.12
USP47-207ENST00000527733 TMEM151BQ8IW70 566 aa14.3□□□□□ -0.12
USP47-207ENST00000527733 THAP3Q8WTV1 239 aaPredicted RBP14.3□□□□□ -0.12
USP47-207ENST00000527733 TMEM234Q8WY98 164 aa14.3□□□□□ -0.12
USP47-207ENST00000527733 AP3S1Q92572 193 aa14.3□□□□□ -0.12
USP47-207ENST00000527733 FCGR1BQ92637 280 aa14.3□□□□□ -0.12
USP47-207ENST00000527733 PCDHGB7Q9Y5F8 929 aa14.3□□□□□ -0.12
USP47-207ENST00000527733 DBIP07108 87 aaKnown RBP14.3□□□□□ -0.12
USP47-207ENST00000527733 ZNF3P17036 446 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms