RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 TIE1P35590 1138 aa14.52□□□□□ -0.08
USH1C-207ENST00000527720 LIPAP38571 399 aa14.52□□□□□ -0.08
USH1C-207ENST00000527720 LSM3P62310 102 aaKnown RBP14.52□□□□□ -0.08
USH1C-207ENST00000527720 ILKQ13418 452 aa14.52□□□□□ -0.08
USH1C-207ENST00000527720 RPE65Q16518 533 aa14.52□□□□□ -0.08
USH1C-207ENST00000527720 RGS21Q2M5E4 152 aa14.52□□□□□ -0.08
USH1C-207ENST00000527720 C9orf50Q5SZB4 431 aa14.52□□□□□ -0.08
USH1C-207ENST00000527720 ABHD17CQ6PCB6 329 aa14.52□□□□□ -0.08
USH1C-207ENST00000527720 SYCE2Q6PIF2 218 aa14.52□□□□□ -0.08
USH1C-207ENST00000527720 OR2L5Q8NG80 312 aa14.52□□□□□ -0.08
USH1C-207ENST00000527720 ZNF675Q8TD23 568 aa14.52□□□□□ -0.08
USH1C-207ENST00000527720 ZHX1-C8orf76Q96EF9 292 aa14.52□□□□□ -0.08
USH1C-207ENST00000527720 BBS4Q96RK4 519 aa14.52□□□□□ -0.08
USH1C-207ENST00000527720 UCK2Q9BZX2 261 aa14.52□□□□□ -0.08
USH1C-207ENST00000527720 PRDM7Q9NQW5 492 aa14.52□□□□□ -0.08
USH1C-207ENST00000527720 ZCCHC3Q9NUD5 404 aaKnown RBP14.52□□□□□ -0.08
USH1C-207ENST00000527720 CLN6Q9NWW5 311 aa14.52□□□□□ -0.08
USH1C-207ENST00000527720 MS4A12Q9NXJ0 267 aa14.52□□□□□ -0.08
USH1C-207ENST00000527720 GPR83Q9NYM4 423 aa14.52□□□□□ -0.08
USH1C-207ENST00000527720 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.52□□□□□ -0.08
USH1C-207ENST00000527720 ASB4Q9Y574 426 aa14.52□□□□□ -0.08
USH1C-207ENST00000527720 SNX11Q9Y5W9 270 aa14.52□□□□□ -0.08
USH1C-207ENST00000527720 COLEC10Q9Y6Z7 277 aa14.52□□□□□ -0.08
USH1C-207ENST00000527720 C5orf42Q9H799 3197 aa14.52□□□□□ -0.09
USH1C-207ENST00000527720 TRBV4-1A0A0J9YWV2 114 aa14.52□□□□□ -0.09
USH1C-207ENST00000527720 HOXC4P09017 264 aaPredicted RBP14.52□□□□□ -0.09
USH1C-207ENST00000527720 OR12D1P0DN82 309 aa14.52□□□□□ -0.09
USH1C-207ENST00000527720 PIPP12273 146 aaPredicted RBP14.52□□□□□ -0.09
USH1C-207ENST00000527720 CMPK1P30085 196 aa14.52□□□□□ -0.09
USH1C-207ENST00000527720 NTSR1P30989 418 aa14.52□□□□□ -0.09
USH1C-207ENST00000527720 IDUAP35475 653 aa14.52□□□□□ -0.09
USH1C-207ENST00000527720 NCBP2P52298 156 aaKnown RBP eCLIP14.52□□□□□ -0.09
USH1C-207ENST00000527720 CRISP3P54108 245 aa14.52□□□□□ -0.09
USH1C-207ENST00000527720 NCS1P62166 190 aa14.52□□□□□ -0.09
USH1C-207ENST00000527720 ST3GAL4Q11206 333 aa14.52□□□□□ -0.09
USH1C-207ENST00000527720 SLAMF1Q13291 335 aa14.52□□□□□ -0.09
USH1C-207ENST00000527720 ANKRD54Q6NXT1 300 aa14.52□□□□□ -0.09
USH1C-207ENST00000527720 LINC00471Q8N535 108 aa14.52□□□□□ -0.09
USH1C-207ENST00000527720 OR6Q1Q8NGQ2 317 aa14.52□□□□□ -0.09
USH1C-207ENST00000527720 ASB12Q8WXK4 309 aa14.52□□□□□ -0.09
USH1C-207ENST00000527720 GABRG3Q99928 467 aa14.52□□□□□ -0.09
USH1C-207ENST00000527720 CDCA4Q9BXL8 241 aa14.52□□□□□ -0.09
USH1C-207ENST00000527720 KLHL31Q9H511 634 aa14.52□□□□□ -0.09
USH1C-207ENST00000527720 A0A0G2JN53 185 aa14.51□□□□□ -0.09
USH1C-207ENST00000527720 OR52A4PA6NMU1 304 aa14.51□□□□□ -0.09
USH1C-207ENST00000527720 HAT1O14929 419 aa14.51□□□□□ -0.09
USH1C-207ENST00000527720 ERI3O43414 337 aaKnown RBP14.51□□□□□ -0.09
USH1C-207ENST00000527720 AIREO43918 545 aa14.51□□□□□ -0.09
USH1C-207ENST00000527720 SLITRK5O94991 958 aa14.51□□□□□ -0.09
USH1C-207ENST00000527720 STSP08842 583 aa14.51□□□□□ -0.09
USH1C-207ENST00000527720 NR2F1P10589 423 aa14.51□□□□□ -0.09
USH1C-207ENST00000527720 FUT4P22083 530 aa14.51□□□□□ -0.09
USH1C-207ENST00000527720 ATP5A1P25705 553 aaKnown RBP14.51□□□□□ -0.09
USH1C-207ENST00000527720 RANBP1P43487 201 aa14.51□□□□□ -0.09
USH1C-207ENST00000527720 ADPRHP54922 357 aa14.51□□□□□ -0.09
USH1C-207ENST00000527720 SNRPGP62308 76 aaKnown RBP14.51□□□□□ -0.09
USH1C-207ENST00000527720 SYPL1Q16563 259 aa14.51□□□□□ -0.09
USH1C-207ENST00000527720 PRAMEF8Q5VWM4 474 aa14.51□□□□□ -0.09
USH1C-207ENST00000527720 PRAMEF7Q5VXH5 474 aa14.51□□□□□ -0.09
USH1C-207ENST00000527720 SDE2Q6IQ49 451 aa14.51□□□□□ -0.09
USH1C-207ENST00000527720 KIAA1211LQ6NV74 962 aa14.51□□□□□ -0.09
USH1C-207ENST00000527720 PARM1Q6UWI2 310 aa14.51□□□□□ -0.09
USH1C-207ENST00000527720 PTCHD4Q6ZW05 846 aa14.51□□□□□ -0.09
USH1C-207ENST00000527720 SLC46A3Q7Z3Q1 461 aa14.51□□□□□ -0.09
USH1C-207ENST00000527720 ACOT4Q8N9L9 421 aa14.51□□□□□ -0.09
USH1C-207ENST00000527720 MFSD9Q8NBP5 474 aa14.51□□□□□ -0.09
USH1C-207ENST00000527720 B3GNT7Q8NFL0 401 aa14.51□□□□□ -0.09
USH1C-207ENST00000527720 FGF14Q92915 247 aa14.51□□□□□ -0.09
USH1C-207ENST00000527720 FUZQ9BT04 418 aa14.51□□□□□ -0.09
USH1C-207ENST00000527720 BTBD2Q9BX70 525 aa14.51□□□□□ -0.09
USH1C-207ENST00000527720 RSPO3Q9BXY4 272 aaPredicted RBP14.51□□□□□ -0.09
USH1C-207ENST00000527720 MKRN2Q9H000 416 aaKnown RBP14.51□□□□□ -0.09
USH1C-207ENST00000527720 AMBNQ9NP70 447 aa14.51□□□□□ -0.09
USH1C-207ENST00000527720 SELENONQ9NZV5 590 aa14.51□□□□□ -0.09
USH1C-207ENST00000527720 REV1Q9UBZ9 1251 aa14.51□□□□□ -0.09
USH1C-207ENST00000527720 MOSPD1Q9UJG1 213 aa14.51□□□□□ -0.09
USH1C-207ENST00000527720 SCML1Q9UN30 329 aa14.51□□□□□ -0.09
USH1C-207ENST00000527720 SNX7Q9UNH6 387 aa14.51□□□□□ -0.09
USH1C-207ENST00000527720 PLEKHM1Q9Y4G2 1056 aa14.51□□□□□ -0.09
USH1C-207ENST00000527720 PRAMEF27A3QJZ7 478 aa14.5□□□□□ -0.09
USH1C-207ENST00000527720 PRR23AA6NEV1 266 aa14.5□□□□□ -0.09
USH1C-207ENST00000527720 PPM1DO15297 605 aa14.5□□□□□ -0.09
USH1C-207ENST00000527720 CNOT3O75175 753 aaKnown RBP14.5□□□□□ -0.09
USH1C-207ENST00000527720 ADORA3P0DMS8 318 aa14.5□□□□□ -0.09
USH1C-207ENST00000527720 LAMP2P13473 410 aa14.5□□□□□ -0.09
USH1C-207ENST00000527720 ALDH4A1P30038 563 aa14.5□□□□□ -0.09
USH1C-207ENST00000527720 CNR2P34972 360 aa14.5□□□□□ -0.09
USH1C-207ENST00000527720 CLK1P49759 484 aaKnown RBP14.5□□□□□ -0.09
USH1C-207ENST00000527720 NUDT6P53370 316 aa14.5□□□□□ -0.09
USH1C-207ENST00000527720 UGT2B15P54855 530 aa14.5□□□□□ -0.09
USH1C-207ENST00000527720 SEC13P55735 322 aa14.5□□□□□ -0.09
USH1C-207ENST00000527720 SYT16Q17RD7 645 aa14.5□□□□□ -0.09
USH1C-207ENST00000527720 TOR1AIP1Q5JTV8 583 aa14.5□□□□□ -0.09
USH1C-207ENST00000527720 ZNF367Q7RTV3 350 aa14.5□□□□□ -0.09
USH1C-207ENST00000527720 CENPSQ8N2Z9 138 aa14.5□□□□□ -0.09
USH1C-207ENST00000527720 OR56A1Q8NGH5 318 aa14.5□□□□□ -0.09
USH1C-207ENST00000527720 XAGE5Q8WWM1 108 aa14.5□□□□□ -0.09
USH1C-207ENST00000527720 UCN3Q969E3 161 aa14.5□□□□□ -0.09
USH1C-207ENST00000527720 DACH2Q96NX9 599 aa14.5□□□□□ -0.09
USH1C-207ENST00000527720 SLIRPQ9GZT3 109 aaKnown RBP14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms