RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 G3BP2Q9UN86 482 aaKnown RBP12.07□□□□□ -0.48
SMPD1-202ENST00000526280 RRP15Q9Y3B9 282 aaKnown RBP12.07□□□□□ -0.48
SMPD1-202ENST00000526280 ATRXP46100 2492 aa12.07□□□□□ -0.48
SMPD1-202ENST00000526280 CNTRLQ7Z7A1 2325 aa12.06□□□□□ -0.48
SMPD1-202ENST00000526280 OR10H2O60403 315 aa12.06□□□□□ -0.48
SMPD1-202ENST00000526280 DDAH2O95865 285 aa12.06□□□□□ -0.48
SMPD1-202ENST00000526280 PRPS2P11908 318 aa12.06□□□□□ -0.48
SMPD1-202ENST00000526280 CSNK2A2P19784 350 aaPredicted RBP12.06□□□□□ -0.48
SMPD1-202ENST00000526280 FEN1P39748 380 aaKnown RBP12.06□□□□□ -0.48
SMPD1-202ENST00000526280 ASMTP46597 345 aa12.06□□□□□ -0.48
SMPD1-202ENST00000526280 ERVK-8P63133 956 aa12.06□□□□□ -0.48
SMPD1-202ENST00000526280 LY6DQ14210 128 aa12.06□□□□□ -0.48
SMPD1-202ENST00000526280 VWA5B1Q5TIE3 1220 aa12.06□□□□□ -0.48
SMPD1-202ENST00000526280 AGAP7PQ5VUJ5 663 aa12.06□□□□□ -0.48
SMPD1-202ENST00000526280 IL23RQ5VWK5 629 aa12.06□□□□□ -0.48
SMPD1-202ENST00000526280 H3F3CQ6NXT2 135 aa12.06□□□□□ -0.48
SMPD1-202ENST00000526280 MAVSQ7Z434 540 aa12.06□□□□□ -0.48
SMPD1-202ENST00000526280 LIX1Q8N485 282 aa12.06□□□□□ -0.48
SMPD1-202ENST00000526280 KIF2BQ8N4N8 673 aa12.06□□□□□ -0.48
SMPD1-202ENST00000526280 C9orf43Q8TAL5 461 aaPredicted RBP12.06□□□□□ -0.48
SMPD1-202ENST00000526280 BRIX1Q8TDN6 353 aaKnown RBP12.06□□□□□ -0.48
SMPD1-202ENST00000526280 EXOSC8Q96B26 276 aaKnown RBP12.06□□□□□ -0.48
SMPD1-202ENST00000526280 CNRIP1Q96F85 164 aaPredicted RBP12.06□□□□□ -0.48
SMPD1-202ENST00000526280 CHMP6Q96FZ7 201 aa12.06□□□□□ -0.48
SMPD1-202ENST00000526280 SENP5Q96HI0 755 aaPredicted RBP12.06□□□□□ -0.48
SMPD1-202ENST00000526280 AGAP4Q96P64 663 aa12.06□□□□□ -0.48
SMPD1-202ENST00000526280 C1orf50Q9BV19 199 aa12.06□□□□□ -0.48
SMPD1-202ENST00000526280 FAM107BQ9H098 131 aa12.06□□□□□ -0.48
SMPD1-202ENST00000526280 CCDC134Q9H6E4 229 aa12.06□□□□□ -0.48
SMPD1-202ENST00000526280 KCNK13Q9HB14 408 aa12.06□□□□□ -0.48
SMPD1-202ENST00000526280 MIEF1Q9NQG6 463 aa12.06□□□□□ -0.48
SMPD1-202ENST00000526280 SLC35C2Q9NQQ7 365 aa12.06□□□□□ -0.48
SMPD1-202ENST00000526280 ASIC5Q9NY37 505 aa12.06□□□□□ -0.48
SMPD1-202ENST00000526280 NOP53Q9NZM5 478 aaKnown RBP12.06□□□□□ -0.48
SMPD1-202ENST00000526280 EIF3LQ9Y262 564 aaKnown RBP12.06□□□□□ -0.48
SMPD1-202ENST00000526280 PCDHGB7Q9Y5F8 929 aa12.06□□□□□ -0.48
SMPD1-202ENST00000526280 USH1CQ9Y6N9 552 aa12.06□□□□□ -0.48
SMPD1-202ENST00000526280 ZNF780BQ9Y6R6 833 aa12.06□□□□□ -0.48
SMPD1-202ENST00000526280 K7EM74 188 aa12.05□□□□□ -0.48
SMPD1-202ENST00000526280 DYRK3O43781 588 aa12.05□□□□□ -0.48
SMPD1-202ENST00000526280 TBX19O60806 448 aa12.05□□□□□ -0.48
SMPD1-202ENST00000526280 PDGFAP04085 211 aa12.05□□□□□ -0.48
SMPD1-202ENST00000526280 ATP1B1P05026 303 aa12.05□□□□□ -0.48
SMPD1-202ENST00000526280 ALPPP05187 535 aa12.05□□□□□ -0.48
SMPD1-202ENST00000526280 LBPP18428 481 aa12.05□□□□□ -0.48
SMPD1-202ENST00000526280 EPHA3P29320 983 aa12.05□□□□□ -0.48
SMPD1-202ENST00000526280 SOX11P35716 441 aa12.05□□□□□ -0.48
SMPD1-202ENST00000526280 CLCN2P51788 898 aa12.05□□□□□ -0.48
SMPD1-202ENST00000526280 PGDP52209 483 aa12.05□□□□□ -0.48
SMPD1-202ENST00000526280 CEBPEQ15744 281 aa12.05□□□□□ -0.48
SMPD1-202ENST00000526280 PRSS53Q2L4Q9 553 aa12.05□□□□□ -0.48
SMPD1-202ENST00000526280 SPRED3Q2MJR0 410 aa12.05□□□□□ -0.48
SMPD1-202ENST00000526280 CRB2Q5IJ48 1285 aa12.05□□□□□ -0.48
SMPD1-202ENST00000526280 OGFOD2Q6N063 350 aa12.05□□□□□ -0.48
SMPD1-202ENST00000526280 FAM180BQ6P0A1 224 aa12.05□□□□□ -0.48
SMPD1-202ENST00000526280 FAM47EQ6ZV65 393 aa12.05□□□□□ -0.48
SMPD1-202ENST00000526280 TICAM1Q8IUC6 712 aa12.05□□□□□ -0.48
SMPD1-202ENST00000526280 SAMD14Q8IZD0 417 aaPredicted RBP12.05□□□□□ -0.48
SMPD1-202ENST00000526280 SIRT6Q8N6T7 355 aa12.05□□□□□ -0.48
SMPD1-202ENST00000526280 OR1N1Q8NGS0 311 aa12.05□□□□□ -0.48
SMPD1-202ENST00000526280 CLHC1Q8NHS4 586 aa12.05□□□□□ -0.48
SMPD1-202ENST00000526280 SLC2A12Q8TD20 617 aa12.05□□□□□ -0.48
SMPD1-202ENST00000526280 ZNF721Q8TF20 911 aa12.05□□□□□ -0.48
SMPD1-202ENST00000526280 RIT1Q92963 219 aa12.05□□□□□ -0.48
SMPD1-202ENST00000526280 GFM2Q969S9 779 aaKnown RBP12.05□□□□□ -0.48
SMPD1-202ENST00000526280 NCLNQ969V3 563 aa12.05□□□□□ -0.48
SMPD1-202ENST00000526280 VMP1Q96GC9 406 aa12.05□□□□□ -0.48
SMPD1-202ENST00000526280 ZNF764Q96H86 408 aaPredicted RBP12.05□□□□□ -0.48
SMPD1-202ENST00000526280 MAELQ96JY0 434 aaKnown RBP12.05□□□□□ -0.48
SMPD1-202ENST00000526280 SEMA4CQ9C0C4 833 aa12.05□□□□□ -0.48
SMPD1-202ENST00000526280 OR8D2Q9GZM6 311 aa12.05□□□□□ -0.48
SMPD1-202ENST00000526280 SLC25A18Q9H1K4 315 aa12.05□□□□□ -0.48
SMPD1-202ENST00000526280 REEP4Q9H6H4 257 aa12.05□□□□□ -0.48
SMPD1-202ENST00000526280 WDR55Q9H6Y2 383 aaPredicted RBP12.05□□□□□ -0.48
SMPD1-202ENST00000526280 CXorf21Q9HAI6 301 aa12.05□□□□□ -0.48
SMPD1-202ENST00000526280 PTGFRNQ9P2B2 879 aa12.05□□□□□ -0.48
SMPD1-202ENST00000526280 TP53TG5Q9Y2B4 290 aa12.05□□□□□ -0.48
SMPD1-202ENST00000526280 ZNF451Q9Y4E5 1061 aa12.05□□□□□ -0.48
SMPD1-202ENST00000526280 BOD1L1Q8NFC6 3051 aa12.05□□□□□ -0.48
SMPD1-202ENST00000526280 TLN1Q9Y490 2541 aaKnown RBP12.05□□□□□ -0.48
SMPD1-202ENST00000526280 GABRR3A8MPY1 467 aa12.04□□□□□ -0.48
SMPD1-202ENST00000526280 A8MUI8 341 aa12.04□□□□□ -0.48
SMPD1-202ENST00000526280 TCP11X1B4DZS4 312 aa12.04□□□□□ -0.48
SMPD1-202ENST00000526280 AKAP10O43572 662 aa12.04□□□□□ -0.48
SMPD1-202ENST00000526280 LRATO95237 230 aa12.04□□□□□ -0.48
SMPD1-202ENST00000526280 TGDSO95455 350 aa12.04□□□□□ -0.48
SMPD1-202ENST00000526280 IGKV3-11P04433 115 aa12.04□□□□□ -0.48
SMPD1-202ENST00000526280 G6PDP11413 515 aa12.04□□□□□ -0.48
SMPD1-202ENST00000526280 DIO3P55073 304 aa12.04□□□□□ -0.48
SMPD1-202ENST00000526280 DUSP2Q05923 314 aa12.04□□□□□ -0.48
SMPD1-202ENST00000526280 PDE7AQ13946 482 aa12.04□□□□□ -0.48
SMPD1-202ENST00000526280 ZNF267Q14586 743 aaPredicted RBP12.04□□□□□ -0.48
SMPD1-202ENST00000526280 PTGR1Q14914 329 aa12.04□□□□□ -0.48
SMPD1-202ENST00000526280 SLC9B1Q4ZJI4 515 aa12.04□□□□□ -0.48
SMPD1-202ENST00000526280 LACTB2Q53H82 288 aaPredicted RBP12.04□□□□□ -0.48
SMPD1-202ENST00000526280 B3GNTL1Q67FW5 361 aaPredicted RBP12.04□□□□□ -0.48
SMPD1-202ENST00000526280 EPGNQ6UW88 154 aa12.04□□□□□ -0.48
SMPD1-202ENST00000526280 IGFL2Q6UWQ7 119 aa12.04□□□□□ -0.48
SMPD1-202ENST00000526280 ISLR2Q6UXK2 745 aa12.04□□□□□ -0.48
SMPD1-202ENST00000526280 CPLX4Q7Z7G2 160 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms