RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 OR10H2O60403 315 aa23.78■■□□□ 1.4
PVT1-219ENST00000523427 EPXP11678 715 aa23.78■■□□□ 1.4
PVT1-219ENST00000523427 CD1DP15813 335 aa23.78■■□□□ 1.4
PVT1-219ENST00000523427 ADSLP30566 484 aaPredicted RBP23.78■■□□□ 1.4
PVT1-219ENST00000523427 GMPRP36959 345 aa23.78■■□□□ 1.4
PVT1-219ENST00000523427 RAP1GDS1P52306 607 aa23.78■■□□□ 1.4
PVT1-219ENST00000523427 CRYZQ08257 329 aaKnown RBP23.78■■□□□ 1.4
PVT1-219ENST00000523427 BICRALQ6AI39 1079 aa23.78■■□□□ 1.4
PVT1-219ENST00000523427 OR4C11Q6IEV9 310 aa23.78■■□□□ 1.4
PVT1-219ENST00000523427 MED27Q6P2C8 311 aa23.78■■□□□ 1.4
PVT1-219ENST00000523427 LACC1Q8IV20 430 aa23.78■■□□□ 1.4
PVT1-219ENST00000523427 ZNF597Q96LX8 424 aa23.78■■□□□ 1.4
PVT1-219ENST00000523427 TRIB1Q96RU8 372 aa23.78■■□□□ 1.4
PVT1-219ENST00000523427 WWTR1Q9GZV5 400 aa23.78■■□□□ 1.4
PVT1-219ENST00000523427 SMYD2Q9NRG4 433 aa23.78■■□□□ 1.4
PVT1-219ENST00000523427 ZNF629Q9UEG4 869 aaPredicted RBP23.78■■□□□ 1.4
PVT1-219ENST00000523427 RNF112Q9ULX5 631 aa23.78■■□□□ 1.4
PVT1-219ENST00000523427 C1QAP02745 245 aa23.77■■□□□ 1.4
PVT1-219ENST00000523427 POU4F1Q01851 419 aa23.77■■□□□ 1.4
PVT1-219ENST00000523427 FRG1Q14331 258 aaKnown RBP23.77■■□□□ 1.4
PVT1-219ENST00000523427 KHDRBS2Q5VWX1 349 aaKnown RBP23.77■■□□□ 1.4
PVT1-219ENST00000523427 POMZP3Q6PJE2 187 aa23.77■■□□□ 1.4
PVT1-219ENST00000523427 BIVMQ86UB2 503 aa23.77■■□□□ 1.4
PVT1-219ENST00000523427 GPR180Q86V85 440 aa23.77■■□□□ 1.4
PVT1-219ENST00000523427 KIF18BQ86Y91 864 aa23.77■■□□□ 1.4
PVT1-219ENST00000523427 UBE2E3Q969T4 207 aa23.77■■□□□ 1.4
PVT1-219ENST00000523427 CMTM7Q96FZ5 175 aa23.77■■□□□ 1.4
PVT1-219ENST00000523427 YIPF4Q9BSR8 244 aa23.77■■□□□ 1.4
PVT1-219ENST00000523427 PTBP2Q9UKA9 531 aaKnown RBP23.77■■□□□ 1.4
PVT1-219ENST00000523427 SNX12Q9UMY4 172 aa23.77■■□□□ 1.4
PVT1-219ENST00000523427 GLOD5A6NK44 160 aa23.76■■□□□ 1.39
PVT1-219ENST00000523427 TLX1P31314 330 aaPredicted RBP23.76■■□□□ 1.39
PVT1-219ENST00000523427 MASP1P48740 699 aa23.76■■□□□ 1.39
PVT1-219ENST00000523427 HNRNPH2P55795 449 aaKnown RBP23.76■■□□□ 1.39
PVT1-219ENST00000523427 FBXW4P57775 412 aa23.76■■□□□ 1.39
PVT1-219ENST00000523427 FBXL19-AS1Q494R0 122 aa23.76■■□□□ 1.39
PVT1-219ENST00000523427 MYLK4Q86YV6 388 aaPredicted RBP23.76■■□□□ 1.39
PVT1-219ENST00000523427 C7orf57Q8NEG2 295 aa23.76■■□□□ 1.39
PVT1-219ENST00000523427 OR7G3Q8NG95 312 aa23.76■■□□□ 1.39
PVT1-219ENST00000523427 TANKQ92844 425 aa23.76■■□□□ 1.39
PVT1-219ENST00000523427 RIT1Q92963 219 aa23.76■■□□□ 1.39
PVT1-219ENST00000523427 HSPBAP1Q96EW2 488 aa23.76■■□□□ 1.39
PVT1-219ENST00000523427 TSPAN17Q96FV3 270 aa23.76■■□□□ 1.39
PVT1-219ENST00000523427 CD244Q9BZW8 370 aa23.76■■□□□ 1.39
PVT1-219ENST00000523427 NSMCE4AQ9NXX6 385 aa23.76■■□□□ 1.39
PVT1-219ENST00000523427 FOXD3Q9UJU5 478 aaPredicted RBP23.76■■□□□ 1.39
PVT1-219ENST00000523427 SCELO95171 688 aa23.75■■□□□ 1.39
PVT1-219ENST00000523427 TIMP3P35625 211 aa23.75■■□□□ 1.39
PVT1-219ENST00000523427 RPL21P46778 160 aaKnown RBP23.75■■□□□ 1.39
PVT1-219ENST00000523427 ATP6V0D1P61421 351 aa23.75■■□□□ 1.39
PVT1-219ENST00000523427 TNFRSF17Q02223 184 aa23.75■■□□□ 1.39
PVT1-219ENST00000523427 TBCCQ15814 346 aa23.75■■□□□ 1.39
PVT1-219ENST00000523427 NTRK2Q16620 822 aa23.75■■□□□ 1.39
PVT1-219ENST00000523427 DEPDC1Q5TB30 811 aa23.75■■□□□ 1.39
PVT1-219ENST00000523427 DND1Q8IYX4 353 aaKnown RBP23.75■■□□□ 1.39
PVT1-219ENST00000523427 ST13P4Q8IZP2 240 aaPredicted RBP23.75■■□□□ 1.39
PVT1-219ENST00000523427 TAGAPQ8N103 731 aa23.75■■□□□ 1.39
PVT1-219ENST00000523427 PDPRQ8NCN5 879 aa23.75■■□□□ 1.39
PVT1-219ENST00000523427 RGMAQ96B86 450 aa23.75■■□□□ 1.39
PVT1-219ENST00000523427 C18orf12Q96KH6 178 aa23.75■■□□□ 1.39
PVT1-219ENST00000523427 GNRHR2Q96P88 292 aa23.75■■□□□ 1.39
PVT1-219ENST00000523427 MS4A12Q9NXJ0 267 aa23.75■■□□□ 1.39
PVT1-219ENST00000523427 PHF11Q9UIL8 331 aa23.75■■□□□ 1.39
PVT1-219ENST00000523427 TP53I11O14683 189 aa23.74■■□□□ 1.39
PVT1-219ENST00000523427 TRIM3O75382 744 aaPredicted RBP23.74■■□□□ 1.39
PVT1-219ENST00000523427 WISP3O95389 354 aaPredicted RBP23.74■■□□□ 1.39
PVT1-219ENST00000523427 SLC37A1P57057 533 aa23.74■■□□□ 1.39
PVT1-219ENST00000523427 DR1Q01658 176 aa23.74■■□□□ 1.39
PVT1-219ENST00000523427 EBPQ15125 230 aaKnown RBP23.74■■□□□ 1.39
PVT1-219ENST00000523427 CDKL4Q5MAI5 379 aa23.74■■□□□ 1.39
PVT1-219ENST00000523427 LRRC70Q7Z2Q7 622 aa23.74■■□□□ 1.39
PVT1-219ENST00000523427 LAS2Q8IYD9 372 aa23.74■■□□□ 1.39
PVT1-219ENST00000523427 ZBED8Q8IZ13 594 aa23.74■■□□□ 1.39
PVT1-219ENST00000523427 RILPQ96NA2 401 aa23.74■■□□□ 1.39
PVT1-219ENST00000523427 ALG9Q9H6U8 611 aa23.74■■□□□ 1.39
PVT1-219ENST00000523427 PLEKHF2Q9H8W4 249 aa23.74■■□□□ 1.39
PVT1-219ENST00000523427 NEUROD4Q9HD90 331 aa23.74■■□□□ 1.39
PVT1-219ENST00000523427 TXNDC16Q9P2K2 825 aa23.74■■□□□ 1.39
PVT1-219ENST00000523427 KIAA1549Q9HCM3 1950 aa23.73■■□□□ 1.39
PVT1-219ENST00000523427 C2orf92A0A1B0GVN3 265 aa23.73■■□□□ 1.39
PVT1-219ENST00000523427 CLCA1A8K7I4 914 aa23.73■■□□□ 1.39
PVT1-219ENST00000523427 CXorf49A8MYA2 514 aaPredicted RBP23.73■■□□□ 1.39
PVT1-219ENST00000523427 STMN1P16949 149 aa23.73■■□□□ 1.39
PVT1-219ENST00000523427 CASP2P42575 452 aa23.73■■□□□ 1.39
PVT1-219ENST00000523427 CDK9P50750 372 aaKnown RBP23.73■■□□□ 1.39
PVT1-219ENST00000523427 BIKQ13323 160 aa23.73■■□□□ 1.39
PVT1-219ENST00000523427 EIPR1Q53HC9 387 aa23.73■■□□□ 1.39
PVT1-219ENST00000523427 NSUN5P2Q63ZY6 315 aa23.73■■□□□ 1.39
PVT1-219ENST00000523427 CLEC9AQ6UXN8 241 aa23.73■■□□□ 1.39
PVT1-219ENST00000523427 PM20D2Q8IYS1 436 aa23.73■■□□□ 1.39
PVT1-219ENST00000523427 VWA5B2Q8N398 1253 aa23.73■■□□□ 1.39
PVT1-219ENST00000523427 HUS1BQ8NHY5 278 aa23.73■■□□□ 1.39
PVT1-219ENST00000523427 UCN3Q969E3 161 aa23.73■■□□□ 1.39
PVT1-219ENST00000523427 MTERF1Q99551 399 aaKnown RBP23.73■■□□□ 1.39
PVT1-219ENST00000523427 CENPKQ9BS16 269 aa23.73■■□□□ 1.39
PVT1-219ENST00000523427 MCMBPQ9BTE3 642 aa23.73■■□□□ 1.39
PVT1-219ENST00000523427 TEX10Q9NXF1 929 aaPredicted RBP23.73■■□□□ 1.39
PVT1-219ENST00000523427 SUPT3HB4E1H0 165 aa23.72■■□□□ 1.39
PVT1-219ENST00000523427 PLPP1O14494 284 aa23.72■■□□□ 1.39
PVT1-219ENST00000523427 SUPT3HO75486 399 aa23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms