RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 WWTR1Q9GZV5 400 aa14.19□□□□□ -0.14
MRPS28-209ENST00000522987 ACTR8Q9H981 624 aa14.19□□□□□ -0.14
MRPS28-209ENST00000522987 NMRAL1Q9HBL8 299 aa14.19□□□□□ -0.14
MRPS28-209ENST00000522987 SH2D2AQ9NP31 389 aa14.19□□□□□ -0.14
MRPS28-209ENST00000522987 ZFP64Q9NPA5 681 aa14.19□□□□□ -0.14
MRPS28-209ENST00000522987 CCM2LQ9NUG4 571 aaPredicted RBP14.19□□□□□ -0.14
MRPS28-209ENST00000522987 WHRNQ9P202 907 aa14.19□□□□□ -0.14
MRPS28-209ENST00000522987 PHF11Q9UIL8 331 aa14.19□□□□□ -0.14
MRPS28-209ENST00000522987 BOKQ9UMX3 212 aaPredicted RBP14.19□□□□□ -0.14
MRPS28-209ENST00000522987 C15orf38-AP3S2A0A0A6YYH1 394 aa14.18□□□□□ -0.14
MRPS28-209ENST00000522987 A0A1W2PR48 441 aa14.18□□□□□ -0.14
MRPS28-209ENST00000522987 MTHFD2P13995 350 aa14.18□□□□□ -0.14
MRPS28-209ENST00000522987 GFAPP14136 432 aa14.18□□□□□ -0.14
MRPS28-209ENST00000522987 CD1EP15812 388 aa14.18□□□□□ -0.14
MRPS28-209ENST00000522987 BMP5P22003 454 aa14.18□□□□□ -0.14
MRPS28-209ENST00000522987 ARL1P40616 181 aaPredicted RBP14.18□□□□□ -0.14
MRPS28-209ENST00000522987 FBXW4P57775 412 aa14.18□□□□□ -0.14
MRPS28-209ENST00000522987 UAP1Q16222 522 aaPredicted RBP14.18□□□□□ -0.14
MRPS28-209ENST00000522987 CPSF6Q16630 551 aaKnown RBP eCLIP14.18□□□□□ -0.14
MRPS28-209ENST00000522987 PFKFB4Q16877 469 aa14.18□□□□□ -0.14
MRPS28-209ENST00000522987 HYAL4Q2M3T9 481 aa14.18□□□□□ -0.14
MRPS28-209ENST00000522987 ARSKQ6UWY0 536 aa14.18□□□□□ -0.14
MRPS28-209ENST00000522987 SEM1Q6ZVN7 128 aa14.18□□□□□ -0.14
MRPS28-209ENST00000522987 ULK2Q8IYT8 1036 aa14.18□□□□□ -0.14
MRPS28-209ENST00000522987 FBXW8Q8N3Y1 598 aa14.18□□□□□ -0.14
MRPS28-209ENST00000522987 RELL2Q8NC24 303 aaPredicted RBP14.18□□□□□ -0.14
MRPS28-209ENST00000522987 UBTD2Q8WUN7 234 aa14.18□□□□□ -0.14
MRPS28-209ENST00000522987 DIO2Q92813 273 aa14.18□□□□□ -0.14
MRPS28-209ENST00000522987 TANKQ92844 425 aa14.18□□□□□ -0.14
MRPS28-209ENST00000522987 ART5Q96L15 291 aa14.18□□□□□ -0.14
MRPS28-209ENST00000522987 DOHHQ9BU89 302 aa14.18□□□□□ -0.14
MRPS28-209ENST00000522987 CPSF2Q9P2I0 782 aaKnown RBP14.18□□□□□ -0.14
MRPS28-209ENST00000522987 CNOT11Q9UKZ1 510 aaKnown RBP14.18□□□□□ -0.14
MRPS28-209ENST00000522987 CHCHD2Q9Y6H1 151 aaPredicted RBP14.18□□□□□ -0.14
MRPS28-209ENST00000522987 ABCA4P78363 2273 aa14.18□□□□□ -0.14
MRPS28-209ENST00000522987 MAP1AP78559 2803 aaPredicted RBP14.17□□□□□ -0.14
MRPS28-209ENST00000522987 FAM187AA6NFU0 413 aa14.17□□□□□ -0.14
MRPS28-209ENST00000522987 EIF3HO15372 352 aaKnown RBP eCLIP14.17□□□□□ -0.14
MRPS28-209ENST00000522987 PROM1O43490 865 aa14.17□□□□□ -0.14
MRPS28-209ENST00000522987 HCN1O60741 890 aa14.17□□□□□ -0.14
MRPS28-209ENST00000522987 TRAPPC6AO75865 159 aa14.17□□□□□ -0.14
MRPS28-209ENST00000522987 SIX3O95343 332 aaPredicted RBP14.17□□□□□ -0.14
MRPS28-209ENST00000522987 ACSL3O95573 720 aa14.17□□□□□ -0.14
MRPS28-209ENST00000522987 AIFM1O95831 613 aa14.17□□□□□ -0.14
MRPS28-209ENST00000522987 CLPSP04118 112 aa14.17□□□□□ -0.14
MRPS28-209ENST00000522987 FBXO45P0C2W1 286 aa14.17□□□□□ -0.14
MRPS28-209ENST00000522987 NR2F6P10588 404 aa14.17□□□□□ -0.14
MRPS28-209ENST00000522987 TLX1P31314 330 aaPredicted RBP14.17□□□□□ -0.14
MRPS28-209ENST00000522987 BUD31P41223 144 aaPredicted RBP14.17□□□□□ -0.14
MRPS28-209ENST00000522987 AGFG1P52594 562 aaKnown RBP14.17□□□□□ -0.14
MRPS28-209ENST00000522987 SLC37A1P57057 533 aa14.17□□□□□ -0.14
MRPS28-209ENST00000522987 E2F2Q14209 437 aa14.17□□□□□ -0.14
MRPS28-209ENST00000522987 EBPQ15125 230 aaKnown RBP14.17□□□□□ -0.14
MRPS28-209ENST00000522987 TOMM20Q15388 145 aa14.17□□□□□ -0.14
MRPS28-209ENST00000522987 CEBPEQ15744 281 aa14.17□□□□□ -0.14
MRPS28-209ENST00000522987 MROH9Q5TGP6 573 aa14.17□□□□□ -0.14
MRPS28-209ENST00000522987 CYP20A1Q6UW02 462 aa14.17□□□□□ -0.14
MRPS28-209ENST00000522987 ST13P4Q8IZP2 240 aaPredicted RBP14.17□□□□□ -0.14
MRPS28-209ENST00000522987 CENPLQ8N0S6 344 aaPredicted RBP14.17□□□□□ -0.14
MRPS28-209ENST00000522987 NAXEQ8NCW5 288 aa14.17□□□□□ -0.14
MRPS28-209ENST00000522987 TNIP2Q8NFZ5 429 aa14.17□□□□□ -0.14
MRPS28-209ENST00000522987 NEIL3Q8TAT5 605 aa14.17□□□□□ -0.14
MRPS28-209ENST00000522987 RIT1Q92963 219 aa14.17□□□□□ -0.14
MRPS28-209ENST00000522987 CDK15Q96Q40 435 aa14.17□□□□□ -0.14
MRPS28-209ENST00000522987 CENPKQ9BS16 269 aa14.17□□□□□ -0.14
MRPS28-209ENST00000522987 ZNF717Q9BY31 904 aaPredicted RBP14.17□□□□□ -0.14
MRPS28-209ENST00000522987 ZNF358Q9NW07 568 aa14.17□□□□□ -0.14
MRPS28-209ENST00000522987 TEX10Q9NXF1 929 aaPredicted RBP14.17□□□□□ -0.14
MRPS28-209ENST00000522987 MS4A12Q9NXJ0 267 aa14.17□□□□□ -0.14
MRPS28-209ENST00000522987 CRIM1Q9NZV1 1036 aa14.17□□□□□ -0.14
MRPS28-209ENST00000522987 PLEKHA6Q9Y2H5 1048 aa14.17□□□□□ -0.14
MRPS28-209ENST00000522987 SLC6A5Q9Y345 797 aa14.17□□□□□ -0.14
MRPS28-209ENST00000522987 RNF11Q9Y3C5 154 aa14.17□□□□□ -0.14
MRPS28-209ENST00000522987 ASB4Q9Y574 426 aa14.17□□□□□ -0.14
MRPS28-209ENST00000522987 MED12LQ86YW9 2145 aa14.17□□□□□ -0.14
MRPS28-209ENST00000522987 PGRMC2O15173 223 aa14.16□□□□□ -0.14
MRPS28-209ENST00000522987 GPR75O95800 540 aa14.16□□□□□ -0.14
MRPS28-209ENST00000522987 CT62P0C5K7 136 aa14.16□□□□□ -0.14
MRPS28-209ENST00000522987 FAM58BPP0C7Q3 252 aa14.16□□□□□ -0.14
MRPS28-209ENST00000522987 SERPINB3P29508 390 aa14.16□□□□□ -0.14
MRPS28-209ENST00000522987 BSGP35613 385 aa14.16□□□□□ -0.14
MRPS28-209ENST00000522987 MAGEA4P43358 317 aa14.16□□□□□ -0.14
MRPS28-209ENST00000522987 KIR2DL3P43628 341 aa14.16□□□□□ -0.14
MRPS28-209ENST00000522987 DUSP8Q13202 625 aa14.16□□□□□ -0.14
MRPS28-209ENST00000522987 SETDB1Q15047 1291 aa14.16□□□□□ -0.14
MRPS28-209ENST00000522987 NNATQ16517 81 aa14.16□□□□□ -0.14
MRPS28-209ENST00000522987 UBAP2Q5T6F2 1119 aaKnown RBP14.16□□□□□ -0.14
MRPS28-209ENST00000522987 RIPPLY2Q5TAB7 128 aa14.16□□□□□ -0.14
MRPS28-209ENST00000522987 DESI1Q6ICB0 168 aa14.16□□□□□ -0.14
MRPS28-209ENST00000522987 GOLGA7Q7Z5G4 137 aa14.16□□□□□ -0.14
MRPS28-209ENST00000522987 LRRC25Q8N386 305 aaPredicted RBP14.16□□□□□ -0.14
MRPS28-209ENST00000522987 SPATA4Q8NEY3 305 aa14.16□□□□□ -0.14
MRPS28-209ENST00000522987 FBXO25Q8TCJ0 367 aa14.16□□□□□ -0.14
MRPS28-209ENST00000522987 ZNF597Q96LX8 424 aa14.16□□□□□ -0.14
MRPS28-209ENST00000522987 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.16□□□□□ -0.14
MRPS28-209ENST00000522987 ACOT9Q9Y305 439 aa14.16□□□□□ -0.14
MRPS28-209ENST00000522987 ACANP16112 2415 aa14.15□□□□□ -0.14
MRPS28-209ENST00000522987 A0A0A6YYD5 115 aa14.15□□□□□ -0.14
MRPS28-209ENST00000522987 C2orf92A0A1B0GVN3 265 aa14.15□□□□□ -0.14
MRPS28-209ENST00000522987 GNB5O14775 395 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms