RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 LPAR4Q99677 370 aa5.84□□□□□ -1.47
VPS13B-211ENST00000522802 MACROD1Q9BQ69 325 aa5.84□□□□□ -1.47
VPS13B-211ENST00000522802 ZNF747Q9BV97 191 aa5.84□□□□□ -1.47
VPS13B-211ENST00000522802 RAB11FIP5Q9BXF6 653 aa5.84□□□□□ -1.47
VPS13B-211ENST00000522802 ZDHHC11Q9H8X9 412 aa5.84□□□□□ -1.47
VPS13B-211ENST00000522802 LMBRD1Q9NUN5 540 aa5.84□□□□□ -1.47
VPS13B-211ENST00000522802 PCYOX1Q9UHG3 505 aa5.84□□□□□ -1.47
VPS13B-211ENST00000522802 SLC39A10Q9ULF5 831 aa5.84□□□□□ -1.47
VPS13B-211ENST00000522802 NFS1Q9Y697 457 aa5.84□□□□□ -1.47
VPS13B-211ENST00000522802 A0A087X0T9 212 aa5.83□□□□□ -1.48
VPS13B-211ENST00000522802 A0A088AWK7 358 aa5.83□□□□□ -1.48
VPS13B-211ENST00000522802 GAGE12BA1L429 117 aa5.83□□□□□ -1.48
VPS13B-211ENST00000522802 GAGE12HA6NDE8 117 aa5.83□□□□□ -1.48
VPS13B-211ENST00000522802 MBD3L4A6NDZ8 208 aaPredicted RBP5.83□□□□□ -1.48
VPS13B-211ENST00000522802 ZNF860A6NHJ4 632 aa5.83□□□□□ -1.48
VPS13B-211ENST00000522802 TUBAL3A6NHL2 446 aa5.83□□□□□ -1.48
VPS13B-211ENST00000522802 MBD3L5A6NJ08 208 aaPredicted RBP5.83□□□□□ -1.48
VPS13B-211ENST00000522802 KLRC4-KLRK1H3BQV0 150 aa5.83□□□□□ -1.48
VPS13B-211ENST00000522802 H7C0S8 307 aa5.83□□□□□ -1.48
VPS13B-211ENST00000522802 SGK494L7N484 410 aa5.83□□□□□ -1.48
VPS13B-211ENST00000522802 HAT1O14929 419 aa5.83□□□□□ -1.48
VPS13B-211ENST00000522802 VPS26AO75436 327 aa5.83□□□□□ -1.48
VPS13B-211ENST00000522802 RDH16O75452 317 aa5.83□□□□□ -1.48
VPS13B-211ENST00000522802 HAUS5O94927 633 aa5.83□□□□□ -1.48
VPS13B-211ENST00000522802 RPN2P04844 631 aa5.83□□□□□ -1.48
VPS13B-211ENST00000522802 FAM228BP0C875 321 aa5.83□□□□□ -1.48
VPS13B-211ENST00000522802 EZRP15311 586 aaKnown RBP5.83□□□□□ -1.48
VPS13B-211ENST00000522802 TNFRSF1AP19438 455 aa5.83□□□□□ -1.48
VPS13B-211ENST00000522802 ZFP36P26651 326 aaKnown RBP5.83□□□□□ -1.48
VPS13B-211ENST00000522802 CMPK1P30085 196 aa5.83□□□□□ -1.48
VPS13B-211ENST00000522802 FOXN2P32314 431 aa5.83□□□□□ -1.48
VPS13B-211ENST00000522802 PEX19P40855 299 aa5.83□□□□□ -1.48
VPS13B-211ENST00000522802 MAGEA5P43359 124 aa5.83□□□□□ -1.48
VPS13B-211ENST00000522802 GEMP55040 296 aa5.83□□□□□ -1.48
VPS13B-211ENST00000522802 OR4D2P58180 307 aa5.83□□□□□ -1.48
VPS13B-211ENST00000522802 UBE2HP62256 183 aa5.83□□□□□ -1.48
VPS13B-211ENST00000522802 SPARCL1Q14515 664 aa5.83□□□□□ -1.48
VPS13B-211ENST00000522802 ITIH4Q14624 930 aa5.83□□□□□ -1.48
VPS13B-211ENST00000522802 NSDHLQ15738 373 aa5.83□□□□□ -1.48
VPS13B-211ENST00000522802 KRTAP24-1Q3LI83 254 aa5.83□□□□□ -1.48
VPS13B-211ENST00000522802 FBXL19-AS1Q494R0 122 aa5.83□□□□□ -1.48
VPS13B-211ENST00000522802 FILIP1LQ4L180 1135 aa5.83□□□□□ -1.48
VPS13B-211ENST00000522802 RIPPLY2Q5TAB7 128 aa5.83□□□□□ -1.48
VPS13B-211ENST00000522802 GARNL3Q5VVW2 1013 aa5.83□□□□□ -1.48
VPS13B-211ENST00000522802 ZNF425Q6IV72 752 aa5.83□□□□□ -1.48
VPS13B-211ENST00000522802 SUSD1Q6UWL2 747 aa5.83□□□□□ -1.48
VPS13B-211ENST00000522802 SLC13A5Q86YT5 568 aaPredicted RBP5.83□□□□□ -1.48
VPS13B-211ENST00000522802 LRRC75A-AS1Q8N1F1 130 aa5.83□□□□□ -1.48
VPS13B-211ENST00000522802 OR56A1Q8NGH5 318 aa5.83□□□□□ -1.48
VPS13B-211ENST00000522802 HMGCLL1Q8TB92 370 aa5.83□□□□□ -1.48
VPS13B-211ENST00000522802 ZCCHC10Q8TBK6 192 aa5.83□□□□□ -1.48
VPS13B-211ENST00000522802 CREB3L4Q8TEY5 395 aa5.83□□□□□ -1.48
VPS13B-211ENST00000522802 RERGQ96A58 199 aaPredicted RBP5.83□□□□□ -1.48
VPS13B-211ENST00000522802 PACSIN1Q9BY11 444 aa5.83□□□□□ -1.48
VPS13B-211ENST00000522802 TTTY12Q9BZ98 90 aa5.83□□□□□ -1.48
VPS13B-211ENST00000522802 MRPL46Q9H2W6 279 aaKnown RBP5.83□□□□□ -1.48
VPS13B-211ENST00000522802 PNPOQ9NVS9 261 aa5.83□□□□□ -1.48
VPS13B-211ENST00000522802 NLE1Q9NVX2 485 aaPredicted RBP5.83□□□□□ -1.48
VPS13B-211ENST00000522802 PIH1D1Q9NWS0 290 aaKnown RBP5.83□□□□□ -1.48
VPS13B-211ENST00000522802 CTTNBP2NLQ9P2B4 639 aa5.83□□□□□ -1.48
VPS13B-211ENST00000522802 SPRR3Q9UBC9 169 aa5.83□□□□□ -1.48
VPS13B-211ENST00000522802 DKK2Q9UBU2 259 aa5.83□□□□□ -1.48
VPS13B-211ENST00000522802 B4GALT7Q9UBV7 327 aa5.83□□□□□ -1.48
VPS13B-211ENST00000522802 NENFQ9UMX5 172 aa5.83□□□□□ -1.48
VPS13B-211ENST00000522802 TENM1Q9UKZ4 2725 aa5.83□□□□□ -1.48
VPS13B-211ENST00000522802 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.82□□□□□ -1.48
VPS13B-211ENST00000522802 ABCA1O95477 2261 aa5.82□□□□□ -1.48
VPS13B-211ENST00000522802 TRBV11-1A0A0K0K1C0 115 aa5.82□□□□□ -1.48
VPS13B-211ENST00000522802 FEZF1A0PJY2 475 aa5.82□□□□□ -1.48
VPS13B-211ENST00000522802 CCDC162PA2VCL2 907 aa5.82□□□□□ -1.48
VPS13B-211ENST00000522802 CDHR4A6H8M9 788 aa5.82□□□□□ -1.48
VPS13B-211ENST00000522802 MAGEB17A8MXT2 336 aa5.82□□□□□ -1.48
VPS13B-211ENST00000522802 H0YIG0 161 aa5.82□□□□□ -1.48
VPS13B-211ENST00000522802 QSOX1O00391 747 aa5.82□□□□□ -1.48
VPS13B-211ENST00000522802 RNASET2O00584 256 aaKnown RBP5.82□□□□□ -1.48
VPS13B-211ENST00000522802 FCHO1O14526 889 aa5.82□□□□□ -1.48
VPS13B-211ENST00000522802 CST8O60676 142 aa5.82□□□□□ -1.48
VPS13B-211ENST00000522802 WDR1O75083 606 aa5.82□□□□□ -1.48
VPS13B-211ENST00000522802 GPC4O75487 556 aa5.82□□□□□ -1.48
VPS13B-211ENST00000522802 TUSC2O75896 110 aa5.82□□□□□ -1.48
VPS13B-211ENST00000522802 ANXA9O76027 345 aa5.82□□□□□ -1.48
VPS13B-211ENST00000522802 GLSO94925 669 aaPredicted RBP5.82□□□□□ -1.48
VPS13B-211ENST00000522802 NSA2O95478 260 aaKnown RBP5.82□□□□□ -1.48
VPS13B-211ENST00000522802 C1orf105O95561 183 aa5.82□□□□□ -1.48
VPS13B-211ENST00000522802 IGHG3P01860 377 aa5.82□□□□□ -1.48
VPS13B-211ENST00000522802 TUBB4AP04350 444 aa5.82□□□□□ -1.48
VPS13B-211ENST00000522802 OR56A5P0C7T3 313 aa5.82□□□□□ -1.48
VPS13B-211ENST00000522802 ZFXP17010 805 aaPredicted RBP5.82□□□□□ -1.48
VPS13B-211ENST00000522802 TPH1P17752 444 aa5.82□□□□□ -1.48
VPS13B-211ENST00000522802 MSNP26038 577 aaKnown RBP5.82□□□□□ -1.48
VPS13B-211ENST00000522802 CDKN2BP42772 138 aa5.82□□□□□ -1.48
VPS13B-211ENST00000522802 AVPR1BP47901 424 aa5.82□□□□□ -1.48
VPS13B-211ENST00000522802 PLGLB1Q02325 96 aa5.82□□□□□ -1.48
VPS13B-211ENST00000522802 PLOD1Q02809 727 aaPredicted RBP5.82□□□□□ -1.48
VPS13B-211ENST00000522802 ACTN3Q08043 901 aaPredicted RBP5.82□□□□□ -1.48
VPS13B-211ENST00000522802 DMTNQ08495 405 aa5.82□□□□□ -1.48
VPS13B-211ENST00000522802 FAM53BQ14153 422 aa5.82□□□□□ -1.48
VPS13B-211ENST00000522802 SEMA3AQ14563 771 aa5.82□□□□□ -1.48
VPS13B-211ENST00000522802 POU6F1Q14863 301 aa5.82□□□□□ -1.48
VPS13B-211ENST00000522802 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms