RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 LOC105371242A0A075B767 164 aa3.88□□□□□ -1.79
HMGB1P1-201ENST00000522557 A0A0U1RQV5 110 aa3.88□□□□□ -1.79
HMGB1P1-201ENST00000522557 E9PMD0 336 aa3.88□□□□□ -1.79
HMGB1P1-201ENST00000522557 SGK494L7N484 410 aa3.88□□□□□ -1.79
HMGB1P1-201ENST00000522557 B4GAT1O43505 415 aa3.88□□□□□ -1.79
HMGB1P1-201ENST00000522557 KIAA0513O60268 411 aa3.88□□□□□ -1.79
HMGB1P1-201ENST00000522557 CSO75390 466 aaKnown RBP3.88□□□□□ -1.79
HMGB1P1-201ENST00000522557 FRAT2O75474 233 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P1-201ENST00000522557 GMNNO75496 209 aa3.88□□□□□ -1.79
HMGB1P1-201ENST00000522557 STK17BO94768 372 aa3.88□□□□□ -1.79
HMGB1P1-201ENST00000522557 AKR7A3O95154 331 aa3.88□□□□□ -1.79
HMGB1P1-201ENST00000522557 GUCA1CO95843 209 aa3.88□□□□□ -1.79
HMGB1P1-201ENST00000522557 IGHG1P01857 330 aa3.88□□□□□ -1.79
HMGB1P1-201ENST00000522557 RPLP0P05388 317 aaKnown RBP3.88□□□□□ -1.79
HMGB1P1-201ENST00000522557 KRT8P05787 483 aa3.88□□□□□ -1.79
HMGB1P1-201ENST00000522557 HIST1H2AGP0C0S8 130 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P1-201ENST00000522557 CCDC159P0C7I6 412 aa3.88□□□□□ -1.79
HMGB1P1-201ENST00000522557 CYP11B1P15538 503 aa3.88□□□□□ -1.79
HMGB1P1-201ENST00000522557 PKLRP30613 574 aa3.88□□□□□ -1.79
HMGB1P1-201ENST00000522557 TSFMP43897 325 aaKnown RBP3.88□□□□□ -1.79
HMGB1P1-201ENST00000522557 NPY2RP49146 381 aa3.88□□□□□ -1.79
HMGB1P1-201ENST00000522557 NUMBP49757 651 aa3.88□□□□□ -1.79
HMGB1P1-201ENST00000522557 SLC26A5P58743 744 aa3.88□□□□□ -1.79
HMGB1P1-201ENST00000522557 POLR2FP61218 127 aaKnown RBP3.88□□□□□ -1.79
HMGB1P1-201ENST00000522557 SCGB2A2Q13296 93 aa3.88□□□□□ -1.79
HMGB1P1-201ENST00000522557 LY6DQ14210 128 aa3.88□□□□□ -1.79
HMGB1P1-201ENST00000522557 LIPKQ5VXJ0 399 aa3.88□□□□□ -1.79
HMGB1P1-201ENST00000522557 CES4AQ5XG92 561 aa3.88□□□□□ -1.79
HMGB1P1-201ENST00000522557 GALNT17Q6IS24 598 aa3.88□□□□□ -1.79
HMGB1P1-201ENST00000522557 TMEM26Q6ZUK4 368 aa3.88□□□□□ -1.79
HMGB1P1-201ENST00000522557 ZER1Q7Z7L7 766 aa3.88□□□□□ -1.79
HMGB1P1-201ENST00000522557 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P1-201ENST00000522557 LEMD2Q8NC56 503 aa3.88□□□□□ -1.79
HMGB1P1-201ENST00000522557 CHDHQ8NE62 594 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P1-201ENST00000522557 ZNF519Q8TB69 540 aa3.88□□□□□ -1.79
HMGB1P1-201ENST00000522557 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P1-201ENST00000522557 HIST1H2ACQ93077 130 aa3.88□□□□□ -1.79
HMGB1P1-201ENST00000522557 MCHR2Q969V1 340 aa3.88□□□□□ -1.79
HMGB1P1-201ENST00000522557 NCLNQ969V3 563 aa3.88□□□□□ -1.79
HMGB1P1-201ENST00000522557 C16orf45Q96MC5 204 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P1-201ENST00000522557 MRPL13Q9BYD1 178 aaKnown RBP3.88□□□□□ -1.79
HMGB1P1-201ENST00000522557 TMEM231Q9H6L2 316 aa3.88□□□□□ -1.79
HMGB1P1-201ENST00000522557 ROPN1Q9HAT0 212 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P1-201ENST00000522557 GDF3Q9NR23 364 aa3.88□□□□□ -1.79
HMGB1P1-201ENST00000522557 NDE1Q9NXR1 346 aa3.88□□□□□ -1.79
HMGB1P1-201ENST00000522557 VPS54Q9P1Q0 977 aa3.88□□□□□ -1.79
HMGB1P1-201ENST00000522557 THAP10Q9P2Z0 257 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P1-201ENST00000522557 LOC390937A0A1W2PQ73 354 aa3.87□□□□□ -1.79
HMGB1P1-201ENST00000522557 EPM2AB3EWF7 344 aa3.87□□□□□ -1.79
HMGB1P1-201ENST00000522557 PDXKO00764 312 aa3.87□□□□□ -1.79
HMGB1P1-201ENST00000522557 SH2D1BO14796 132 aa3.87□□□□□ -1.79
HMGB1P1-201ENST00000522557 ANGPT2O15123 496 aa3.87□□□□□ -1.79
HMGB1P1-201ENST00000522557 CLDN3O15551 220 aa3.87□□□□□ -1.79
HMGB1P1-201ENST00000522557 BUB1O43683 1085 aa3.87□□□□□ -1.79
HMGB1P1-201ENST00000522557 SNAP91O60641 907 aa3.87□□□□□ -1.79
HMGB1P1-201ENST00000522557 DIRAS3O95661 229 aa3.87□□□□□ -1.79
HMGB1P1-201ENST00000522557 PROS1P07225 676 aa3.87□□□□□ -1.79
HMGB1P1-201ENST00000522557 ZNF883P0CG24 379 aa3.87□□□□□ -1.79
HMGB1P1-201ENST00000522557 GNSP15586 552 aa3.87□□□□□ -1.79
HMGB1P1-201ENST00000522557 PTPN6P29350 595 aa3.87□□□□□ -1.79
HMGB1P1-201ENST00000522557 FCGR2BP31994 310 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P1-201ENST00000522557 FCGR2CP31995 323 aa3.87□□□□□ -1.79
HMGB1P1-201ENST00000522557 PGFP49763 221 aa3.87□□□□□ -1.79
HMGB1P1-201ENST00000522557 MYBPC1Q00872 1141 aa3.87□□□□□ -1.79
HMGB1P1-201ENST00000522557 CALCOCO2Q13137 446 aa3.87□□□□□ -1.79
HMGB1P1-201ENST00000522557 SLC17A1Q14916 467 aa3.87□□□□□ -1.79
HMGB1P1-201ENST00000522557 P2RY14Q15391 338 aa3.87□□□□□ -1.79
HMGB1P1-201ENST00000522557 FCN2Q15485 313 aa3.87□□□□□ -1.79
HMGB1P1-201ENST00000522557 CCL14Q16627 93 aa3.87□□□□□ -1.79
HMGB1P1-201ENST00000522557 HAGHQ16775 308 aa3.87□□□□□ -1.79
HMGB1P1-201ENST00000522557 CMPK2Q5EBM0 449 aa3.87□□□□□ -1.79
HMGB1P1-201ENST00000522557 RTL6Q6ICC9 239 aa3.87□□□□□ -1.79
HMGB1P1-201ENST00000522557 SLC39A4Q6P5W5 647 aa3.87□□□□□ -1.79
HMGB1P1-201ENST00000522557 ZNF730Q6ZMV8 503 aa3.87□□□□□ -1.79
HMGB1P1-201ENST00000522557 ZFAND4Q86XD8 727 aa3.87□□□□□ -1.79
HMGB1P1-201ENST00000522557 LMNTD2Q8IXW0 634 aa3.87□□□□□ -1.79
HMGB1P1-201ENST00000522557 ARL6IP6Q8N6S5 226 aa3.87□□□□□ -1.79
HMGB1P1-201ENST00000522557 ZNF540Q8NDQ6 660 aa3.87□□□□□ -1.79
HMGB1P1-201ENST00000522557 RDH11Q8TC12 318 aa3.87□□□□□ -1.79
HMGB1P1-201ENST00000522557 SSC4DQ8WTU2 575 aa3.87□□□□□ -1.79
HMGB1P1-201ENST00000522557 ARHGAP45Q92619 1136 aa3.87□□□□□ -1.79
HMGB1P1-201ENST00000522557 DTNBP1Q96EV8 351 aa3.87□□□□□ -1.79
HMGB1P1-201ENST00000522557 COG3Q96JB2 828 aa3.87□□□□□ -1.79
HMGB1P1-201ENST00000522557 USP28Q96RU2 1077 aa3.87□□□□□ -1.79
HMGB1P1-201ENST00000522557 TESK2Q96S53 571 aa3.87□□□□□ -1.79
HMGB1P1-201ENST00000522557 NDUFAF3Q9BU61 184 aa3.87□□□□□ -1.79
HMGB1P1-201ENST00000522557 RAB11FIP5Q9BXF6 653 aa3.87□□□□□ -1.79
HMGB1P1-201ENST00000522557 FAM124BQ9H5Z6 455 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P1-201ENST00000522557 SLC35D1Q9NTN3 355 aa3.87□□□□□ -1.79
HMGB1P1-201ENST00000522557 ANKMY1Q9P2S6 941 aa3.87□□□□□ -1.79
HMGB1P1-201ENST00000522557 ATXN10Q9UBB4 475 aa3.87□□□□□ -1.79
HMGB1P1-201ENST00000522557 MBD2Q9UBB5 411 aa3.87□□□□□ -1.79
HMGB1P1-201ENST00000522557 FOXJ3Q9UPW0 622 aa3.87□□□□□ -1.79
HMGB1P1-201ENST00000522557 A0A0A6YYD4 124 aa3.86□□□□□ -1.79
HMGB1P1-201ENST00000522557 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P1-201ENST00000522557 A0A1B0GUL7 405 aa3.86□□□□□ -1.79
HMGB1P1-201ENST00000522557 MEI4A8MW99 385 aa3.86□□□□□ -1.79
HMGB1P1-201ENST00000522557 TCP10L2B9ZVM9 353 aa3.86□□□□□ -1.79
HMGB1P1-201ENST00000522557 TRAFD1O14545 582 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P1-201ENST00000522557 MAGEC1O60732 1142 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms