RNA–Protein interactions for RNA: ENST00000521233.1

HDAC2-211, Transcript of histone deacetylase 2, humanhuman

TSL 2

Gene HDAC2, Length 733 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-211ENST00000521233 LIX1Q8N485 282 aa11.67□□□□□ -0.54
HDAC2-211ENST00000521233 NFAM1Q8NET5 270 aaPredicted RBP11.67□□□□□ -0.54
HDAC2-211ENST00000521233 FDCSPQ8NFU4 85 aa11.67□□□□□ -0.54
HDAC2-211ENST00000521233 SLC2A12Q8TD20 617 aa11.67□□□□□ -0.54
HDAC2-211ENST00000521233 BRIX1Q8TDN6 353 aaKnown RBP11.67□□□□□ -0.54
HDAC2-211ENST00000521233 ELP5Q8TE02 316 aa11.67□□□□□ -0.54
HDAC2-211ENST00000521233 PTPMT1Q8WUK0 201 aaPredicted RBP11.67□□□□□ -0.54
HDAC2-211ENST00000521233 EXOSC8Q96B26 276 aaKnown RBP11.67□□□□□ -0.54
HDAC2-211ENST00000521233 ABHD17AQ96GS6 310 aa11.67□□□□□ -0.54
HDAC2-211ENST00000521233 FBXL20Q96IG2 436 aa11.67□□□□□ -0.54
HDAC2-211ENST00000521233 TSSK3Q96PN8 268 aa11.67□□□□□ -0.54
HDAC2-211ENST00000521233 SMAD5Q99717 465 aaKnown RBP11.67□□□□□ -0.54
HDAC2-211ENST00000521233 C1orf50Q9BV19 199 aa11.67□□□□□ -0.54
HDAC2-211ENST00000521233 NUDT9Q9BW91 350 aa11.67□□□□□ -0.54
HDAC2-211ENST00000521233 AKTIPQ9H8T0 292 aa11.67□□□□□ -0.54
HDAC2-211ENST00000521233 KCNK13Q9HB14 408 aa11.67□□□□□ -0.54
HDAC2-211ENST00000521233 SLC35C2Q9NQQ7 365 aa11.67□□□□□ -0.54
HDAC2-211ENST00000521233 TAS2R7Q9NYW3 318 aa11.67□□□□□ -0.54
HDAC2-211ENST00000521233 HEY2Q9UBP5 337 aa11.67□□□□□ -0.54
HDAC2-211ENST00000521233 ATRXP46100 2492 aa11.67□□□□□ -0.54
HDAC2-211ENST00000521233 SCN2AQ99250 2005 aa11.67□□□□□ -0.54
HDAC2-211ENST00000521233 MED13Q9UHV7 2174 aa11.67□□□□□ -0.54
HDAC2-211ENST00000521233 NBEAQ8NFP9 2946 aa11.66□□□□□ -0.54
HDAC2-211ENST00000521233 TRBV11-1A0A0K0K1C0 115 aa11.66□□□□□ -0.54
HDAC2-211ENST00000521233 CDK2AP1O14519 115 aa11.66□□□□□ -0.54
HDAC2-211ENST00000521233 SDHDO14521 159 aa11.66□□□□□ -0.54
HDAC2-211ENST00000521233 DPM1O60762 260 aa11.66□□□□□ -0.54
HDAC2-211ENST00000521233 ITGAMP11215 1152 aa11.66□□□□□ -0.54
HDAC2-211ENST00000521233 TACR1P25103 407 aa11.66□□□□□ -0.54
HDAC2-211ENST00000521233 MFAP5Q13361 173 aa11.66□□□□□ -0.54
HDAC2-211ENST00000521233 RAPSNQ13702 412 aa11.66□□□□□ -0.54
HDAC2-211ENST00000521233 ABHD17BQ5VST6 288 aa11.66□□□□□ -0.54
HDAC2-211ENST00000521233 IL23RQ5VWK5 629 aa11.66□□□□□ -0.54
HDAC2-211ENST00000521233 TICAM1Q8IUC6 712 aa11.66□□□□□ -0.54
HDAC2-211ENST00000521233 MMP21Q8N119 569 aa11.66□□□□□ -0.54
HDAC2-211ENST00000521233 EXD3Q8N9H8 876 aa11.66□□□□□ -0.54
HDAC2-211ENST00000521233 APCDD1LQ8NCL9 501 aa11.66□□□□□ -0.54
HDAC2-211ENST00000521233 OR1N1Q8NGS0 311 aa11.66□□□□□ -0.54
HDAC2-211ENST00000521233 OR8K3Q8NH51 312 aa11.66□□□□□ -0.54
HDAC2-211ENST00000521233 ZFP28Q8NHY6 868 aa11.66□□□□□ -0.54
HDAC2-211ENST00000521233 RIT1Q92963 219 aa11.66□□□□□ -0.54
HDAC2-211ENST00000521233 NCLNQ969V3 563 aa11.66□□□□□ -0.54
HDAC2-211ENST00000521233 PPCDCQ96CD2 204 aa11.66□□□□□ -0.54
HDAC2-211ENST00000521233 ERP27Q96DN0 273 aa11.66□□□□□ -0.54
HDAC2-211ENST00000521233 PPP1R36Q96LQ0 422 aa11.66□□□□□ -0.54
HDAC2-211ENST00000521233 ZNF354BQ96LW1 612 aa11.66□□□□□ -0.54
HDAC2-211ENST00000521233 BBS4Q96RK4 519 aa11.66□□□□□ -0.54
HDAC2-211ENST00000521233 PRPF18Q99633 342 aaKnown RBP11.66□□□□□ -0.54
HDAC2-211ENST00000521233 SIKE1Q9BRV8 207 aa11.66□□□□□ -0.54
HDAC2-211ENST00000521233 DEFB126Q9BYW3 111 aa11.66□□□□□ -0.54
HDAC2-211ENST00000521233 SEMA4CQ9C0C4 833 aa11.66□□□□□ -0.54
HDAC2-211ENST00000521233 OR8D2Q9GZM6 311 aa11.66□□□□□ -0.54
HDAC2-211ENST00000521233 SLC25A18Q9H1K4 315 aa11.66□□□□□ -0.54
HDAC2-211ENST00000521233 REEP4Q9H6H4 257 aa11.66□□□□□ -0.54
HDAC2-211ENST00000521233 ZNF552Q9H707 407 aaPredicted RBP11.66□□□□□ -0.54
HDAC2-211ENST00000521233 SLCO1B3Q9NPD5 702 aa11.66□□□□□ -0.54
HDAC2-211ENST00000521233 RYDENQ9NUL5 291 aaKnown RBP11.66□□□□□ -0.54
HDAC2-211ENST00000521233 ATAD3AQ9NVI7 634 aa11.66□□□□□ -0.54
HDAC2-211ENST00000521233 GIMAP2Q9UG22 337 aa11.66□□□□□ -0.54
HDAC2-211ENST00000521233 METRNQ9UJH8 293 aa11.66□□□□□ -0.54
HDAC2-211ENST00000521233 TP53TG5Q9Y2B4 290 aa11.66□□□□□ -0.54
HDAC2-211ENST00000521233 USH1CQ9Y6N9 552 aa11.66□□□□□ -0.54
HDAC2-211ENST00000521233 LOC400499M0QZD8 3231 aa11.65□□□□□ -0.54
HDAC2-211ENST00000521233 OR6C76A6NM76 312 aa11.65□□□□□ -0.54
HDAC2-211ENST00000521233 MASP2O00187 686 aa11.65□□□□□ -0.54
HDAC2-211ENST00000521233 SCAMP2O15127 329 aaKnown RBP11.65□□□□□ -0.54
HDAC2-211ENST00000521233 PDPK1O15530 556 aa11.65□□□□□ -0.54
HDAC2-211ENST00000521233 DDAH2O95865 285 aa11.65□□□□□ -0.54
HDAC2-211ENST00000521233 CELA2AP08217 269 aa11.65□□□□□ -0.54
HDAC2-211ENST00000521233 PRPS1L1P21108 318 aa11.65□□□□□ -0.54
HDAC2-211ENST00000521233 NT5EP21589 574 aa11.65□□□□□ -0.54
HDAC2-211ENST00000521233 MPIP34949 423 aa11.65□□□□□ -0.54
HDAC2-211ENST00000521233 FEN1P39748 380 aaKnown RBP11.65□□□□□ -0.54
HDAC2-211ENST00000521233 C21orf58P58505 322 aa11.65□□□□□ -0.54
HDAC2-211ENST00000521233 PDE7AQ13946 482 aa11.65□□□□□ -0.54
HDAC2-211ENST00000521233 CEBPEQ15744 281 aa11.65□□□□□ -0.54
HDAC2-211ENST00000521233 ZSCAN26Q16670 478 aa11.65□□□□□ -0.54
HDAC2-211ENST00000521233 LCE2DQ5TA82 110 aaPredicted RBP11.65□□□□□ -0.54
HDAC2-211ENST00000521233 H3F3CQ6NXT2 135 aa11.65□□□□□ -0.54
HDAC2-211ENST00000521233 PCSK4Q6UW60 755 aa11.65□□□□□ -0.54
HDAC2-211ENST00000521233 IGFL3Q6UXB1 125 aa11.65□□□□□ -0.54
HDAC2-211ENST00000521233 HSDL2Q6YN16 418 aa11.65□□□□□ -0.54
HDAC2-211ENST00000521233 FAM47EQ6ZV65 393 aa11.65□□□□□ -0.54
HDAC2-211ENST00000521233 ASB18Q6ZVZ8 466 aa11.65□□□□□ -0.54
HDAC2-211ENST00000521233 ACAD11Q709F0 780 aa11.65□□□□□ -0.54
HDAC2-211ENST00000521233 SPATA19Q7Z5L4 167 aa11.65□□□□□ -0.54
HDAC2-211ENST00000521233 VWA5B2Q8N398 1253 aa11.65□□□□□ -0.54
HDAC2-211ENST00000521233 NATD1Q8N6N6 113 aa11.65□□□□□ -0.54
HDAC2-211ENST00000521233 SIRT6Q8N6T7 355 aa11.65□□□□□ -0.54
HDAC2-211ENST00000521233 OR7G1Q8NGA0 311 aa11.65□□□□□ -0.54
HDAC2-211ENST00000521233 CLHC1Q8NHS4 586 aa11.65□□□□□ -0.54
HDAC2-211ENST00000521233 ZNF675Q8TD23 568 aa11.65□□□□□ -0.54
HDAC2-211ENST00000521233 ACTRT2Q8TDY3 377 aa11.65□□□□□ -0.54
HDAC2-211ENST00000521233 STON2Q8WXE9 905 aa11.65□□□□□ -0.54
HDAC2-211ENST00000521233 SLC39A7Q92504 469 aa11.65□□□□□ -0.54
HDAC2-211ENST00000521233 CNRIP1Q96F85 164 aaPredicted RBP11.65□□□□□ -0.54
HDAC2-211ENST00000521233 MAELQ96JY0 434 aaKnown RBP11.65□□□□□ -0.54
HDAC2-211ENST00000521233 LMF1Q96S06 567 aa11.65□□□□□ -0.54
HDAC2-211ENST00000521233 CNPPD1Q9BV87 410 aa11.65□□□□□ -0.54
HDAC2-211ENST00000521233 RNF32Q9H0A6 362 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms