RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 TANC1Q9C0D5 1861 aa2.84□□□□□ -1.95
HMGB1P41-201ENST00000520234 MYH3P11055 1940 aa2.84□□□□□ -1.95
HMGB1P41-201ENST00000520234 CICQ96RK0 1608 aaPredicted RBP2.84□□□□□ -1.95
HMGB1P41-201ENST00000520234 IGLV7-46A0A075B6I9 117 aa2.84□□□□□ -1.95
HMGB1P41-201ENST00000520234 A0A0J9YVX5 310 aa2.84□□□□□ -1.95
HMGB1P41-201ENST00000520234 ESYT2A0FGR8 921 aa2.84□□□□□ -1.95
HMGB1P41-201ENST00000520234 LRRD1A4D1F6 860 aa2.84□□□□□ -1.95
HMGB1P41-201ENST00000520234 TMEM150CB9EJG8 249 aa2.84□□□□□ -1.95
HMGB1P41-201ENST00000520234 ZNF195O14628 629 aa2.84□□□□□ -1.95
HMGB1P41-201ENST00000520234 KLRC4O43908 158 aa2.84□□□□□ -1.95
HMGB1P41-201ENST00000520234 SERPINB7O75635 380 aa2.84□□□□□ -1.95
HMGB1P41-201ENST00000520234 SHBGP04278 402 aa2.84□□□□□ -1.95
HMGB1P41-201ENST00000520234 ATP1B1P05026 303 aa2.84□□□□□ -1.95
HMGB1P41-201ENST00000520234 SERPING1P05155 500 aa2.84□□□□□ -1.95
HMGB1P41-201ENST00000520234 CLTAP09496 248 aa2.84□□□□□ -1.95
HMGB1P41-201ENST00000520234 NUDT17P0C025 328 aa2.84□□□□□ -1.95
HMGB1P41-201ENST00000520234 FAM200BP0CF97 657 aa2.84□□□□□ -1.95
HMGB1P41-201ENST00000520234 TCP1P17987 556 aaKnown RBP2.84□□□□□ -1.95
HMGB1P41-201ENST00000520234 RPL35AP18077 110 aaKnown RBP2.84□□□□□ -1.95
HMGB1P41-201ENST00000520234 HMGB2P26583 209 aaKnown RBP2.84□□□□□ -1.95
HMGB1P41-201ENST00000520234 GTF2H1P32780 548 aa2.84□□□□□ -1.95
HMGB1P41-201ENST00000520234 TSFMP43897 325 aaKnown RBP2.84□□□□□ -1.95
HMGB1P41-201ENST00000520234 HUNKP57058 714 aa2.84□□□□□ -1.95
HMGB1P41-201ENST00000520234 KRT83P78385 493 aa2.84□□□□□ -1.95
HMGB1P41-201ENST00000520234 HPCAP84074 193 aa2.84□□□□□ -1.95
HMGB1P41-201ENST00000520234 CYCSP99999 105 aaKnown RBP2.84□□□□□ -1.95
HMGB1P41-201ENST00000520234 TSPY1Q01534 308 aa2.84□□□□□ -1.95
HMGB1P41-201ENST00000520234 GUCY2DQ02846 1103 aa2.84□□□□□ -1.95
HMGB1P41-201ENST00000520234 MECOMQ03112 1051 aa2.84□□□□□ -1.95
HMGB1P41-201ENST00000520234 SCN1BQ07699 218 aa2.84□□□□□ -1.95
HMGB1P41-201ENST00000520234 SRSF9Q13242 221 aaKnown RBP eCLIP2.84□□□□□ -1.95
HMGB1P41-201ENST00000520234 ITPK1Q13572 414 aa2.84□□□□□ -1.95
HMGB1P41-201ENST00000520234 CUL1Q13616 776 aa2.84□□□□□ -1.95
HMGB1P41-201ENST00000520234 EXT1Q16394 746 aa2.84□□□□□ -1.95
HMGB1P41-201ENST00000520234 C12orf60Q5U649 245 aa2.84□□□□□ -1.95
HMGB1P41-201ENST00000520234 BSPRYQ5W0U4 402 aa2.84□□□□□ -1.95
HMGB1P41-201ENST00000520234 CENPPQ6IPU0 288 aa2.84□□□□□ -1.95
HMGB1P41-201ENST00000520234 CGB2Q6NT52 195 aa2.84□□□□□ -1.95
HMGB1P41-201ENST00000520234 FUT10Q6P4F1 479 aa2.84□□□□□ -1.95
HMGB1P41-201ENST00000520234 CCDC80Q76M96 950 aa2.84□□□□□ -1.95
HMGB1P41-201ENST00000520234 ANKRD33Q7Z3H0 272 aa2.84□□□□□ -1.95
HMGB1P41-201ENST00000520234 SPATA19Q7Z5L4 167 aa2.84□□□□□ -1.95
HMGB1P41-201ENST00000520234 DZIP1Q86YF9 867 aaKnown RBP2.84□□□□□ -1.95
HMGB1P41-201ENST00000520234 FAM219AQ8IW50 185 aa2.84□□□□□ -1.95
HMGB1P41-201ENST00000520234 NELFCDQ8IXH7 590 aa2.84□□□□□ -1.95
HMGB1P41-201ENST00000520234 IFT20Q8IY31 132 aa2.84□□□□□ -1.95
HMGB1P41-201ENST00000520234 LRRC34Q8IZ02 419 aa2.84□□□□□ -1.95
HMGB1P41-201ENST00000520234 MYOCDQ8IZQ8 938 aa2.84□□□□□ -1.95
HMGB1P41-201ENST00000520234 BLIDQ8IZY5 108 aa2.84□□□□□ -1.95
HMGB1P41-201ENST00000520234 GPC2Q8N158 579 aa2.84□□□□□ -1.95
HMGB1P41-201ENST00000520234 ARHGAP18Q8N392 663 aa2.84□□□□□ -1.95
HMGB1P41-201ENST00000520234 KLHDC1Q8N7A1 406 aa2.84□□□□□ -1.95
HMGB1P41-201ENST00000520234 ZNF713Q8N859 430 aaPredicted RBP2.84□□□□□ -1.95
HMGB1P41-201ENST00000520234 OR5T2Q8NGG2 359 aa2.84□□□□□ -1.95
HMGB1P41-201ENST00000520234 OR6S1Q8NH40 331 aa2.84□□□□□ -1.95
HMGB1P41-201ENST00000520234 GRK7Q8WTQ7 553 aa2.84□□□□□ -1.95
HMGB1P41-201ENST00000520234 SMAP2Q8WU79 429 aaPredicted RBP2.84□□□□□ -1.95
HMGB1P41-201ENST00000520234 TEKT1Q969V4 418 aa2.84□□□□□ -1.95
HMGB1P41-201ENST00000520234 PYCR2Q96C36 320 aa2.84□□□□□ -1.95
HMGB1P41-201ENST00000520234 NECTIN4Q96NY8 510 aa2.84□□□□□ -1.95
HMGB1P41-201ENST00000520234 ERGIC2Q96RQ1 377 aa2.84□□□□□ -1.95
HMGB1P41-201ENST00000520234 CGREF1Q99674 301 aa2.84□□□□□ -1.95
HMGB1P41-201ENST00000520234 HNRNPABQ99729 332 aaKnown RBP2.84□□□□□ -1.95
HMGB1P41-201ENST00000520234 TRIM51Q9BSJ1 452 aa2.84□□□□□ -1.95
HMGB1P41-201ENST00000520234 MCRIP2Q9BUT9 160 aaKnown RBP2.84□□□□□ -1.95
HMGB1P41-201ENST00000520234 SPZ1Q9BXG8 430 aa2.84□□□□□ -1.95
HMGB1P41-201ENST00000520234 TDRD1Q9BXT4 1180 aaKnown RBP2.84□□□□□ -1.95
HMGB1P41-201ENST00000520234 FGFBP2Q9BYJ0 223 aa2.84□□□□□ -1.95
HMGB1P41-201ENST00000520234 CRNKL1Q9BZJ0 848 aaKnown RBP2.84□□□□□ -1.95
HMGB1P41-201ENST00000520234 NYXQ9GZU5 481 aa2.84□□□□□ -1.95
HMGB1P41-201ENST00000520234 RAB17Q9H0T7 212 aa2.84□□□□□ -1.95
HMGB1P41-201ENST00000520234 NEUROG2Q9H2A3 272 aa2.84□□□□□ -1.95
HMGB1P41-201ENST00000520234 QPCTLQ9NXS2 382 aa2.84□□□□□ -1.95
HMGB1P41-201ENST00000520234 CYP39A1Q9NYL5 469 aa2.84□□□□□ -1.95
HMGB1P41-201ENST00000520234 NARFQ9UHQ1 456 aa2.84□□□□□ -1.95
HMGB1P41-201ENST00000520234 LNPEPQ9UIQ6 1025 aa2.84□□□□□ -1.95
HMGB1P41-201ENST00000520234 GUCA1BQ9UMX6 200 aa2.84□□□□□ -1.95
HMGB1P41-201ENST00000520234 TFR2Q9UP52 801 aa2.84□□□□□ -1.95
HMGB1P41-201ENST00000520234 NIP7Q9Y221 180 aaKnown RBP eCLIP2.84□□□□□ -1.95
HMGB1P41-201ENST00000520234 SH3GLB1Q9Y371 365 aa2.84□□□□□ -1.95
HMGB1P41-201ENST00000520234 TIMM22Q9Y584 194 aa2.84□□□□□ -1.95
HMGB1P41-201ENST00000520234 SELENOKQ9Y6D0 94 aa2.84□□□□□ -1.95
HMGB1P41-201ENST00000520234 RREB1Q92766 1687 aa2.84□□□□□ -1.95
HMGB1P41-201ENST00000520234 SHANK3Q9BYB0 1731 aa2.84□□□□□ -1.96
HMGB1P41-201ENST00000520234 ROBO3Q96MS0 1386 aa2.84□□□□□ -1.96
HMGB1P41-201ENST00000520234 DLEC1Q9Y238 1755 aa2.84□□□□□ -1.96
HMGB1P41-201ENST00000520234 SLIT2O94813 1529 aa2.83□□□□□ -1.96
HMGB1P41-201ENST00000520234 ZNF831Q5JPB2 1677 aa2.83□□□□□ -1.96
HMGB1P41-201ENST00000520234 ARAP2Q8WZ64 1704 aa2.83□□□□□ -1.96
HMGB1P41-201ENST00000520234 BICDL2A1A5D9 508 aa2.83□□□□□ -1.96
HMGB1P41-201ENST00000520234 NDUFAF8A1L188 74 aa2.83□□□□□ -1.96
HMGB1P41-201ENST00000520234 CCDC162PA2VCL2 907 aa2.83□□□□□ -1.96
HMGB1P41-201ENST00000520234 C5orf52A6NGY3 159 aa2.83□□□□□ -1.96
HMGB1P41-201ENST00000520234 SNURFLB1AK76 121 aa2.83□□□□□ -1.96
HMGB1P41-201ENST00000520234 C17orf105B2RV13 164 aa2.83□□□□□ -1.96
HMGB1P41-201ENST00000520234 E9PBE3 544 aa2.83□□□□□ -1.96
HMGB1P41-201ENST00000520234 F8VVB4 439 aa2.83□□□□□ -1.96
HMGB1P41-201ENST00000520234 F8VWA3 439 aa2.83□□□□□ -1.96
HMGB1P41-201ENST00000520234 FPGTO14772 594 aa2.83□□□□□ -1.96
HMGB1P41-201ENST00000520234 MAGEB2O15479 319 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms