RNA–Protein interactions for RNA: ENST00000519955.1

NPM1-206, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-206ENST00000519955 ZNF506Q5JVG8 444 aa4.24□□□□□ -1.73
NPM1-206ENST00000519955 FGFRL1Q8N441 504 aa4.24□□□□□ -1.73
NPM1-206ENST00000519955 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.24□□□□□ -1.73
NPM1-206ENST00000519955 CHDHQ8NE62 594 aaPredicted RBP4.24□□□□□ -1.73
NPM1-206ENST00000519955 FBXO25Q8TCJ0 367 aa4.24□□□□□ -1.73
NPM1-206ENST00000519955 PNPLA2Q96AD5 504 aa4.24□□□□□ -1.73
NPM1-206ENST00000519955 RAB39BQ96DA2 213 aa4.24□□□□□ -1.73
NPM1-206ENST00000519955 GPR137Q96N19 417 aa4.24□□□□□ -1.73
NPM1-206ENST00000519955 ACAT2Q9BWD1 397 aa4.24□□□□□ -1.73
NPM1-206ENST00000519955 VPS54Q9P1Q0 977 aa4.24□□□□□ -1.73
NPM1-206ENST00000519955 NARFQ9UHQ1 456 aa4.24□□□□□ -1.73
NPM1-206ENST00000519955 ZNF346Q9UL40 294 aaKnown RBP4.24□□□□□ -1.73
NPM1-206ENST00000519955 TDRKHQ9Y2W6 561 aaKnown RBP4.24□□□□□ -1.73
NPM1-206ENST00000519955 TRBV2A0A0J9YWF9 115 aa4.23□□□□□ -1.73
NPM1-206ENST00000519955 TEX48A0A1B0GUV7 120 aa4.23□□□□□ -1.73
NPM1-206ENST00000519955 ERI2A8K979 691 aaKnown RBP4.23□□□□□ -1.73
NPM1-206ENST00000519955 SEMA4FO95754 770 aa4.23□□□□□ -1.73
NPM1-206ENST00000519955 RENP00797 406 aa4.23□□□□□ -1.73
NPM1-206ENST00000519955 FCER2P06734 321 aa4.23□□□□□ -1.73
NPM1-206ENST00000519955 P4HA1P13674 534 aa4.23□□□□□ -1.73
NPM1-206ENST00000519955 GSTO1P78417 241 aa4.23□□□□□ -1.73
NPM1-206ENST00000519955 CCZ1BP86790 482 aa4.23□□□□□ -1.73
NPM1-206ENST00000519955 CCZ1P86791 482 aaPredicted RBP4.23□□□□□ -1.73
NPM1-206ENST00000519955 GALK2Q01415 458 aa4.23□□□□□ -1.73
NPM1-206ENST00000519955 ITPK1Q13572 414 aa4.23□□□□□ -1.73
NPM1-206ENST00000519955 TMEM44Q2T9K0 475 aa4.23□□□□□ -1.73
NPM1-206ENST00000519955 EPC2Q52LR7 807 aa4.23□□□□□ -1.73
NPM1-206ENST00000519955 NKAIN2Q5VXU1 208 aa4.23□□□□□ -1.73
NPM1-206ENST00000519955 SEL1L3Q68CR1 1132 aa4.23□□□□□ -1.73
NPM1-206ENST00000519955 REP15Q6BDI9 236 aa4.23□□□□□ -1.73
NPM1-206ENST00000519955 ETFRF1Q6IPR1 90 aa4.23□□□□□ -1.73
NPM1-206ENST00000519955 CDC42EP5Q6NZY7 148 aa4.23□□□□□ -1.73
NPM1-206ENST00000519955 ARMCX5Q6P1M9 558 aa4.23□□□□□ -1.73
NPM1-206ENST00000519955 CCDC71Q8IV32 467 aaPredicted RBP4.23□□□□□ -1.73
NPM1-206ENST00000519955 RTL3Q8N8U3 475 aaKnown RBP4.23□□□□□ -1.73
NPM1-206ENST00000519955 OR4Q3Q8NH05 313 aa4.23□□□□□ -1.73
NPM1-206ENST00000519955 OR4F5Q8NH21 305 aa4.23□□□□□ -1.73
NPM1-206ENST00000519955 CAPNS2Q96L46 248 aa4.23□□□□□ -1.73
NPM1-206ENST00000519955 ATP6V0BQ99437 205 aa4.23□□□□□ -1.73
NPM1-206ENST00000519955 KCNMB3Q9NPA1 279 aa4.23□□□□□ -1.73
NPM1-206ENST00000519955 EIF3KQ9UBQ5 218 aaKnown RBP4.23□□□□□ -1.73
NPM1-206ENST00000519955 TRMT6Q9UJA5 497 aaKnown RBP4.23□□□□□ -1.73
NPM1-206ENST00000519955 APPL1Q9UKG1 709 aa4.23□□□□□ -1.73
NPM1-206ENST00000519955 TRIM49BA6NDI0 452 aa4.22□□□□□ -1.73
NPM1-206ENST00000519955 FOXI3A8MTJ6 420 aaPredicted RBP4.22□□□□□ -1.73
NPM1-206ENST00000519955 SRRM5B3KS81 715 aa4.22□□□□□ -1.73
NPM1-206ENST00000519955 TLR4O00206 839 aa4.22□□□□□ -1.73
NPM1-206ENST00000519955 VEGFDO43915 354 aa4.22□□□□□ -1.73
NPM1-206ENST00000519955 HSF2BPO75031 334 aa4.22□□□□□ -1.73
NPM1-206ENST00000519955 APRTP07741 180 aa4.22□□□□□ -1.73
NPM1-206ENST00000519955 ABHD2P08910 425 aa4.22□□□□□ -1.73
NPM1-206ENST00000519955 CCDC159P0C7I6 412 aa4.22□□□□□ -1.73
NPM1-206ENST00000519955 VDRP11473 427 aa4.22□□□□□ -1.73
NPM1-206ENST00000519955 CALML3P27482 149 aa4.22□□□□□ -1.73
NPM1-206ENST00000519955 ACADSBP45954 432 aa4.22□□□□□ -1.73
NPM1-206ENST00000519955 KRTAP10-12P60413 245 aa4.22□□□□□ -1.73
NPM1-206ENST00000519955 GFPT1Q06210 699 aaPredicted RBP4.22□□□□□ -1.73
NPM1-206ENST00000519955 PPP1R8Q12972 351 aaKnown RBP4.22□□□□□ -1.73
NPM1-206ENST00000519955 CBX3Q13185 183 aa4.22□□□□□ -1.73
NPM1-206ENST00000519955 EXOSC7Q15024 291 aaKnown RBP4.22□□□□□ -1.73
NPM1-206ENST00000519955 HAGHQ16775 308 aa4.22□□□□□ -1.73
NPM1-206ENST00000519955 PCK2Q16822 640 aa4.22□□□□□ -1.73
NPM1-206ENST00000519955 GPAT3Q53EU6 434 aa4.22□□□□□ -1.73
NPM1-206ENST00000519955 HIST2H2AA3Q6FI13 130 aa4.22□□□□□ -1.73
NPM1-206ENST00000519955 RHBDD2Q6NTF9 364 aa4.22□□□□□ -1.73
NPM1-206ENST00000519955 GPR142Q7Z601 462 aa4.22□□□□□ -1.73
NPM1-206ENST00000519955 PEX5LQ8IYB4 626 aa4.22□□□□□ -1.73
NPM1-206ENST00000519955 RDH11Q8TC12 318 aa4.22□□□□□ -1.73
NPM1-206ENST00000519955 COG3Q96JB2 828 aa4.22□□□□□ -1.73
NPM1-206ENST00000519955 C1orf147Q96MC9 270 aaPredicted RBP4.22□□□□□ -1.73
NPM1-206ENST00000519955 ZNF560Q96MR9 790 aa4.22□□□□□ -1.73
NPM1-206ENST00000519955 TEX13AQ9BXU3 409 aaPredicted RBP4.22□□□□□ -1.73
NPM1-206ENST00000519955 ABCG4Q9H172 646 aa4.22□□□□□ -1.73
NPM1-206ENST00000519955 ELL3Q9HB65 397 aaPredicted RBP4.22□□□□□ -1.73
NPM1-206ENST00000519955 SLC25A19Q9HC21 320 aa4.22□□□□□ -1.73
NPM1-206ENST00000519955 ERVK-18Q9QC07 812 aa4.22□□□□□ -1.73
NPM1-206ENST00000519955 TRIM10Q9UDY6 481 aa4.22□□□□□ -1.73
NPM1-206ENST00000519955 ATG4BQ9Y4P1 393 aa4.22□□□□□ -1.73
NPM1-206ENST00000519955 TEX264Q9Y6I9 313 aa4.22□□□□□ -1.73
NPM1-206ENST00000519955 TRIM64A6NGJ6 449 aa4.21□□□□□ -1.74
NPM1-206ENST00000519955 TRIM64BA6NI03 449 aa4.21□□□□□ -1.74
NPM1-206ENST00000519955 ARPC1BO15143 372 aaKnown RBP4.21□□□□□ -1.74
NPM1-206ENST00000519955 CXCL14O95715 111 aa4.21□□□□□ -1.74
NPM1-206ENST00000519955 FCGR3AP08637 254 aa4.21□□□□□ -1.74
NPM1-206ENST00000519955 PPP2R1BP30154 601 aa4.21□□□□□ -1.74
NPM1-206ENST00000519955 ELK3P41970 407 aa4.21□□□□□ -1.74
NPM1-206ENST00000519955 TNFRSF4P43489 277 aa4.21□□□□□ -1.74
NPM1-206ENST00000519955 NT5C2P49902 561 aa4.21□□□□□ -1.74
NPM1-206ENST00000519955 CNN1P51911 297 aaKnown RBP4.21□□□□□ -1.74
NPM1-206ENST00000519955 NDST1P52848 882 aa4.21□□□□□ -1.74
NPM1-206ENST00000519955 UNC50Q53HI1 259 aa4.21□□□□□ -1.74
NPM1-206ENST00000519955 WDR25Q64LD2 544 aaPredicted RBP4.21□□□□□ -1.74
NPM1-206ENST00000519955 LEMD1Q68G75 181 aa4.21□□□□□ -1.74
NPM1-206ENST00000519955 REG3GQ6UW15 175 aa4.21□□□□□ -1.74
NPM1-206ENST00000519955 ASRGL1Q7L266 308 aa4.21□□□□□ -1.74
NPM1-206ENST00000519955 LINC00518Q8N0U6 118 aa4.21□□□□□ -1.74
NPM1-206ENST00000519955 SLC39A11Q8N1S5 342 aa4.21□□□□□ -1.74
NPM1-206ENST00000519955 DTD2Q96FN9 168 aa4.21□□□□□ -1.74
NPM1-206ENST00000519955 PNNQ9H307 717 aaKnown RBP4.21□□□□□ -1.74
NPM1-206ENST00000519955 Q9HAA7 133 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms