RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 MCCC2Q9HCC0 563 aa11.47□□□□□ -0.57
CSMD1-205ENST00000519623 KCNJ16Q9NPI9 418 aa11.47□□□□□ -0.57
CSMD1-205ENST00000519623 LYARQ9NX58 379 aaKnown RBP11.47□□□□□ -0.57
CSMD1-205ENST00000519623 NINJ2Q9NZG7 142 aa11.47□□□□□ -0.57
CSMD1-205ENST00000519623 CPSF2Q9P2I0 782 aaKnown RBP11.47□□□□□ -0.57
CSMD1-205ENST00000519623 TNFRSF10DQ9UBN6 386 aa11.47□□□□□ -0.57
CSMD1-205ENST00000519623 TNPO3Q9Y5L0 923 aaKnown RBP11.47□□□□□ -0.57
CSMD1-205ENST00000519623 FAM215AQ9Y5M1 114 aa11.47□□□□□ -0.57
CSMD1-205ENST00000519623 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.47□□□□□ -0.57
CSMD1-205ENST00000519623 ANKRD17O75179 2603 aaKnown RBP11.47□□□□□ -0.57
CSMD1-205ENST00000519623 IQANK1A0A1B0GTG1 560 aa11.46□□□□□ -0.57
CSMD1-205ENST00000519623 AQP7O14520 342 aa11.46□□□□□ -0.57
CSMD1-205ENST00000519623 PGRMC2O15173 223 aa11.46□□□□□ -0.57
CSMD1-205ENST00000519623 DYRK3O43781 588 aa11.46□□□□□ -0.57
CSMD1-205ENST00000519623 CLDN9O95484 217 aa11.46□□□□□ -0.57
CSMD1-205ENST00000519623 FBXO45P0C2W1 286 aa11.46□□□□□ -0.57
CSMD1-205ENST00000519623 RFPL3SP0C7P2 107 aa11.46□□□□□ -0.57
CSMD1-205ENST00000519623 SLC35E2P0CK97 266 aa11.46□□□□□ -0.57
CSMD1-205ENST00000519623 GLI4P10075 376 aa11.46□□□□□ -0.57
CSMD1-205ENST00000519623 GALNSP34059 522 aa11.46□□□□□ -0.57
CSMD1-205ENST00000519623 MAGEA12P43365 314 aa11.46□□□□□ -0.57
CSMD1-205ENST00000519623 PIK3CGP48736 1102 aa11.46□□□□□ -0.57
CSMD1-205ENST00000519623 SLC37A1P57057 533 aa11.46□□□□□ -0.57
CSMD1-205ENST00000519623 HERVK_113P63132 956 aa11.46□□□□□ -0.57
CSMD1-205ENST00000519623 ERVK-8P63133 956 aa11.46□□□□□ -0.57
CSMD1-205ENST00000519623 TLE4Q04727 773 aa11.46□□□□□ -0.57
CSMD1-205ENST00000519623 UAP1Q16222 522 aaPredicted RBP11.46□□□□□ -0.57
CSMD1-205ENST00000519623 TECRLQ5HYJ1 363 aa11.46□□□□□ -0.57
CSMD1-205ENST00000519623 ZNF585AQ6P3V2 769 aa11.46□□□□□ -0.57
CSMD1-205ENST00000519623 RELL1Q8IUW5 271 aa11.46□□□□□ -0.57
CSMD1-205ENST00000519623 OR52B6Q8NGF0 335 aa11.46□□□□□ -0.57
CSMD1-205ENST00000519623 OR5M3Q8NGP4 307 aa11.46□□□□□ -0.57
CSMD1-205ENST00000519623 SLC22A8Q8TCC7 542 aa11.46□□□□□ -0.57
CSMD1-205ENST00000519623 CHTF18Q8WVB6 975 aa11.46□□□□□ -0.57
CSMD1-205ENST00000519623 RIT1Q92963 219 aa11.46□□□□□ -0.57
CSMD1-205ENST00000519623 CDK15Q96Q40 435 aa11.46□□□□□ -0.57
CSMD1-205ENST00000519623 PELOQ9BRX2 385 aaKnown RBP11.46□□□□□ -0.57
CSMD1-205ENST00000519623 CNPPD1Q9BV87 410 aa11.46□□□□□ -0.57
CSMD1-205ENST00000519623 ERVK-6Q9BXR3 956 aa11.46□□□□□ -0.57
CSMD1-205ENST00000519623 WWTR1Q9GZV5 400 aa11.46□□□□□ -0.57
CSMD1-205ENST00000519623 VPS11Q9H270 941 aa11.46□□□□□ -0.57
CSMD1-205ENST00000519623 NOL11Q9H8H0 719 aaKnown RBP11.46□□□□□ -0.57
CSMD1-205ENST00000519623 ERVK-19Q9WJR5 959 aa11.46□□□□□ -0.57
CSMD1-205ENST00000519623 CHCHD2Q9Y6H1 151 aaPredicted RBP11.46□□□□□ -0.57
CSMD1-205ENST00000519623 CELSR1Q9NYQ6 3014 aa11.45□□□□□ -0.58
CSMD1-205ENST00000519623 A0A1W2PS29 197 aa11.45□□□□□ -0.58
CSMD1-205ENST00000519623 FAM90A27PA6NNH2 459 aa11.45□□□□□ -0.58
CSMD1-205ENST00000519623 HCN1O60741 890 aa11.45□□□□□ -0.58
CSMD1-205ENST00000519623 AIFM1O95831 613 aa11.45□□□□□ -0.58
CSMD1-205ENST00000519623 GBAP04062 536 aa11.45□□□□□ -0.58
CSMD1-205ENST00000519623 NR2F6P10588 404 aa11.45□□□□□ -0.58
CSMD1-205ENST00000519623 ENDOUP21128 410 aaKnown RBP11.45□□□□□ -0.58
CSMD1-205ENST00000519623 MSX1P28360 303 aa11.45□□□□□ -0.58
CSMD1-205ENST00000519623 SERPINB3P29508 390 aa11.45□□□□□ -0.58
CSMD1-205ENST00000519623 MAN2A2P49641 1150 aa11.45□□□□□ -0.58
CSMD1-205ENST00000519623 SERPINB8P50452 374 aa11.45□□□□□ -0.58
CSMD1-205ENST00000519623 PHEXP78562 749 aa11.45□□□□□ -0.58
CSMD1-205ENST00000519623 TBL3Q12788 808 aaKnown RBP11.45□□□□□ -0.58
CSMD1-205ENST00000519623 EBPQ15125 230 aaKnown RBP11.45□□□□□ -0.58
CSMD1-205ENST00000519623 C8orf74Q6P047 294 aa11.45□□□□□ -0.58
CSMD1-205ENST00000519623 KLC3Q6P597 504 aa11.45□□□□□ -0.58
CSMD1-205ENST00000519623 CYP20A1Q6UW02 462 aa11.45□□□□□ -0.58
CSMD1-205ENST00000519623 RNF111Q6ZNA4 994 aa11.45□□□□□ -0.58
CSMD1-205ENST00000519623 SLC29A4Q7RTT9 530 aa11.45□□□□□ -0.58
CSMD1-205ENST00000519623 DMRTC2Q8IXT2 367 aaPredicted RBP11.45□□□□□ -0.58
CSMD1-205ENST00000519623 DND1Q8IYX4 353 aaKnown RBP11.45□□□□□ -0.58
CSMD1-205ENST00000519623 LRRC25Q8N386 305 aaPredicted RBP11.45□□□□□ -0.58
CSMD1-205ENST00000519623 FBXW8Q8N3Y1 598 aa11.45□□□□□ -0.58
CSMD1-205ENST00000519623 PTGR2Q8N8N7 351 aaPredicted RBP11.45□□□□□ -0.58
CSMD1-205ENST00000519623 ZNF441Q8N8Z8 693 aa11.45□□□□□ -0.58
CSMD1-205ENST00000519623 OR10G3Q8NGC4 313 aa11.45□□□□□ -0.58
CSMD1-205ENST00000519623 SLC44A1Q8WWI5 657 aa11.45□□□□□ -0.58
CSMD1-205ENST00000519623 ISL2Q96A47 359 aa11.45□□□□□ -0.58
CSMD1-205ENST00000519623 PHF21BQ96EK2 531 aa11.45□□□□□ -0.58
CSMD1-205ENST00000519623 SERPINI1Q99574 410 aa11.45□□□□□ -0.58
CSMD1-205ENST00000519623 NTMT1Q9BV86 223 aa11.45□□□□□ -0.58
CSMD1-205ENST00000519623 CXorf21Q9HAI6 301 aa11.45□□□□□ -0.58
CSMD1-205ENST00000519623 ZBTB26Q9HCK0 441 aa11.45□□□□□ -0.58
CSMD1-205ENST00000519623 ZFP64Q9NPA5 681 aa11.45□□□□□ -0.58
CSMD1-205ENST00000519623 RYDENQ9NUL5 291 aaKnown RBP11.45□□□□□ -0.58
CSMD1-205ENST00000519623 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.45□□□□□ -0.58
CSMD1-205ENST00000519623 CNIH4Q9P003 139 aa11.45□□□□□ -0.58
CSMD1-205ENST00000519623 ITGB1BP2Q9UKP3 347 aa11.45□□□□□ -0.58
CSMD1-205ENST00000519623 ACAD8Q9UKU7 415 aa11.45□□□□□ -0.58
CSMD1-205ENST00000519623 CNOT11Q9UKZ1 510 aaKnown RBP11.45□□□□□ -0.58
CSMD1-205ENST00000519623 TRGV5A0A0B4J1U4 118 aa11.44□□□□□ -0.58
CSMD1-205ENST00000519623 A0A0G2JNJ9 132 aa11.44□□□□□ -0.58
CSMD1-205ENST00000519623 ANKRD33BA6NCL7 494 aa11.44□□□□□ -0.58
CSMD1-205ENST00000519623 LRRC3CA6NJW4 275 aa11.44□□□□□ -0.58
CSMD1-205ENST00000519623 OR6C76A6NM76 312 aa11.44□□□□□ -0.58
CSMD1-205ENST00000519623 FIGNL2A6NMB9 653 aa11.44□□□□□ -0.58
CSMD1-205ENST00000519623 STX16-NPEPL1H3BU86 382 aa11.44□□□□□ -0.58
CSMD1-205ENST00000519623 STX16O14662 325 aa11.44□□□□□ -0.58
CSMD1-205ENST00000519623 OR10H2O60403 315 aa11.44□□□□□ -0.58
CSMD1-205ENST00000519623 SEMA3DO95025 777 aa11.44□□□□□ -0.58
CSMD1-205ENST00000519623 HOXD4P09016 255 aaPredicted RBP11.44□□□□□ -0.58
CSMD1-205ENST00000519623 RBP1P09455 135 aa11.44□□□□□ -0.58
CSMD1-205ENST00000519623 SSTR4P31391 388 aa11.44□□□□□ -0.58
CSMD1-205ENST00000519623 PHBP35232 272 aa11.44□□□□□ -0.58
CSMD1-205ENST00000519623 ADH7P40394 386 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms