RNA–Protein interactions for RNA: ENST00000519540.5

FAM49B-214, Transcript of family with sequence similarity 49 member B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM49B, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-214ENST00000519540 FAM60AQ9NP50 221 aa17.41■□□□□ 0.38
FAM49B-214ENST00000519540 ORC6Q9Y5N6 252 aa17.41■□□□□ 0.38
FAM49B-214ENST00000519540 DNAH14Q0VDD8 3507 aa17.41■□□□□ 0.38
FAM49B-214ENST00000519540 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.4■□□□□ 0.38
FAM49B-214ENST00000519540 PRAMEF27A3QJZ7 478 aa17.4■□□□□ 0.38
FAM49B-214ENST00000519540 TRIM64A6NGJ6 449 aa17.4■□□□□ 0.38
FAM49B-214ENST00000519540 C9P02748 559 aa17.4■□□□□ 0.38
FAM49B-214ENST00000519540 PABPC4LP0CB38 370 aaKnown RBP17.4■□□□□ 0.38
FAM49B-214ENST00000519540 BCKDHBP21953 392 aa17.4■□□□□ 0.38
FAM49B-214ENST00000519540 IGFBP5P24593 272 aa17.4■□□□□ 0.38
FAM49B-214ENST00000519540 CXCL12P48061 93 aa17.4■□□□□ 0.38
FAM49B-214ENST00000519540 NXPH1P58417 271 aa17.4■□□□□ 0.38
FAM49B-214ENST00000519540 KDM4DQ6B0I6 523 aa17.4■□□□□ 0.38
FAM49B-214ENST00000519540 SLC36A4Q6YBV0 504 aa17.4■□□□□ 0.38
FAM49B-214ENST00000519540 SATL1Q86VE3 508 aa17.4■□□□□ 0.38
FAM49B-214ENST00000519540 TMEFF1Q8IYR6 380 aa17.4■□□□□ 0.38
FAM49B-214ENST00000519540 XAGE5Q8WWM1 108 aa17.4■□□□□ 0.38
FAM49B-214ENST00000519540 ELP4Q96EB1 424 aa17.4■□□□□ 0.38
FAM49B-214ENST00000519540 UCK1Q9HA47 277 aa17.4■□□□□ 0.38
FAM49B-214ENST00000519540 TMEM74BQ9NUR3 256 aa17.4■□□□□ 0.38
FAM49B-214ENST00000519540 MS4A12Q9NXJ0 267 aa17.4■□□□□ 0.38
FAM49B-214ENST00000519540 P2RX2Q9UBL9 471 aa17.4■□□□□ 0.38
FAM49B-214ENST00000519540 TRPC4Q9UBN4 977 aa17.4■□□□□ 0.38
FAM49B-214ENST00000519540 SH3GLB1Q9Y371 365 aa17.4■□□□□ 0.38
FAM49B-214ENST00000519540 ZNF451Q9Y4E5 1061 aa17.4■□□□□ 0.38
FAM49B-214ENST00000519540 SLC22A7Q9Y694 548 aa17.4■□□□□ 0.38
FAM49B-214ENST00000519540 CEP192Q8TEP8 1941 aa17.4■□□□□ 0.38
FAM49B-214ENST00000519540 ABCA7Q8IZY2 2146 aa17.4■□□□□ 0.38
FAM49B-214ENST00000519540 K7ESF4 209 aa17.4■□□□□ 0.38
FAM49B-214ENST00000519540 HCRTR1O43613 425 aa17.4■□□□□ 0.38
FAM49B-214ENST00000519540 MITFO75030 526 aaPredicted RBP17.4■□□□□ 0.38
FAM49B-214ENST00000519540 MFN2O95140 757 aa17.4■□□□□ 0.38
FAM49B-214ENST00000519540 HMGN2P05204 90 aaKnown RBP17.4■□□□□ 0.38
FAM49B-214ENST00000519540 DCNP07585 359 aaKnown RBP17.4■□□□□ 0.38
FAM49B-214ENST00000519540 FHP07954 510 aa17.4■□□□□ 0.38
FAM49B-214ENST00000519540 ITGA2P17301 1181 aa17.4■□□□□ 0.38
FAM49B-214ENST00000519540 VSX2P58304 361 aaPredicted RBP17.4■□□□□ 0.38
FAM49B-214ENST00000519540 SIM2Q14190 667 aaPredicted RBP17.4■□□□□ 0.38
FAM49B-214ENST00000519540 SYPL1Q16563 259 aa17.4■□□□□ 0.38
FAM49B-214ENST00000519540 KLHL35Q6PF15 583 aa17.4■□□□□ 0.38
FAM49B-214ENST00000519540 PRSS41Q7RTY9 318 aa17.4■□□□□ 0.38
FAM49B-214ENST00000519540 METTL25Q8N6Q8 603 aa17.4■□□□□ 0.38
FAM49B-214ENST00000519540 CSNK1A1LQ8N752 337 aa17.4■□□□□ 0.38
FAM49B-214ENST00000519540 OR56A1Q8NGH5 318 aa17.4■□□□□ 0.38
FAM49B-214ENST00000519540 OR9A2Q8NGT5 310 aa17.4■□□□□ 0.38
FAM49B-214ENST00000519540 CSF3RQ99062 836 aa17.4■□□□□ 0.38
FAM49B-214ENST00000519540 LYRM4Q9HD34 91 aa17.4■□□□□ 0.38
FAM49B-214ENST00000519540 PRDM9Q9NQV7 894 aa17.4■□□□□ 0.38
FAM49B-214ENST00000519540 SIT1Q9Y3P8 196 aa17.4■□□□□ 0.38
FAM49B-214ENST00000519540 TMEM247A6NEH6 219 aa17.39■□□□□ 0.37
FAM49B-214ENST00000519540 ADAMDEC1O15204 470 aa17.39■□□□□ 0.37
FAM49B-214ENST00000519540 SLC16A6O15403 523 aa17.39■□□□□ 0.37
FAM49B-214ENST00000519540 AQP9O43315 295 aa17.39■□□□□ 0.37
FAM49B-214ENST00000519540 EMC8O43402 210 aa17.39■□□□□ 0.37
FAM49B-214ENST00000519540 SLC28A2O43868 658 aa17.39■□□□□ 0.37
FAM49B-214ENST00000519540 PDE9AO76083 593 aa17.39■□□□□ 0.37
FAM49B-214ENST00000519540 RECKO95980 971 aa17.39■□□□□ 0.37
FAM49B-214ENST00000519540 CD247P20963 164 aa17.39■□□□□ 0.37
FAM49B-214ENST00000519540 CDH3P22223 829 aa17.39■□□□□ 0.37
FAM49B-214ENST00000519540 TLX1P31314 330 aaPredicted RBP17.39■□□□□ 0.37
FAM49B-214ENST00000519540 KHKP50053 298 aa17.39■□□□□ 0.37
FAM49B-214ENST00000519540 NR1H2P55055 460 aa17.39■□□□□ 0.37
FAM49B-214ENST00000519540 OLR1P78380 273 aa17.39■□□□□ 0.37
FAM49B-214ENST00000519540 C17orf82Q86X59 251 aaPredicted RBP17.39■□□□□ 0.37
FAM49B-214ENST00000519540 UBALD2Q8IYN6 164 aa17.39■□□□□ 0.37
FAM49B-214ENST00000519540 DEFB123Q8N688 67 aa17.39■□□□□ 0.37
FAM49B-214ENST00000519540 OR4K14Q8NGD5 310 aa17.39■□□□□ 0.37
FAM49B-214ENST00000519540 RSPO3Q9BXY4 272 aaPredicted RBP17.39■□□□□ 0.37
FAM49B-214ENST00000519540 YTHDF1Q9BYJ9 559 aaKnown RBP17.39■□□□□ 0.37
FAM49B-214ENST00000519540 C3orf14Q9HBI5 128 aa17.39■□□□□ 0.37
FAM49B-214ENST00000519540 THEGQ9P2T0 379 aa17.39■□□□□ 0.37
FAM49B-214ENST00000519540 TESMINQ9Y4I5 508 aa17.39■□□□□ 0.37
FAM49B-214ENST00000519540 LYVE1Q9Y5Y7 322 aa17.39■□□□□ 0.37
FAM49B-214ENST00000519540 LOC100130705A0A1B0GUX0 176 aa17.38■□□□□ 0.37
FAM49B-214ENST00000519540 ZNF860A6NHJ4 632 aa17.38■□□□□ 0.37
FAM49B-214ENST00000519540 POLR2IP36954 125 aaKnown RBP17.38■□□□□ 0.37
FAM49B-214ENST00000519540 MC3RP41968 323 aa17.38■□□□□ 0.37
FAM49B-214ENST00000519540 YAP1P46937 504 aaKnown RBP17.38■□□□□ 0.37
FAM49B-214ENST00000519540 CSNK1EP49674 416 aaKnown RBP17.38■□□□□ 0.37
FAM49B-214ENST00000519540 ANXA11P50995 505 aaKnown RBP17.38■□□□□ 0.37
FAM49B-214ENST00000519540 XKP51811 444 aa17.38■□□□□ 0.37
FAM49B-214ENST00000519540 CDH15P55291 814 aa17.38■□□□□ 0.37
FAM49B-214ENST00000519540 HNRNPKP61978 463 aaKnown RBP eCLIP17.38■□□□□ 0.371e-8■■■■■ 28.3
FAM49B-214ENST00000519540 SIM1P81133 766 aaPredicted RBP17.38■□□□□ 0.37
FAM49B-214ENST00000519540 PRR5P85299 388 aa17.38■□□□□ 0.37
FAM49B-214ENST00000519540 LASP1Q14847 261 aaKnown RBP17.38■□□□□ 0.37
FAM49B-214ENST00000519540 FAHD1Q6P587 224 aa17.38■□□□□ 0.37
FAM49B-214ENST00000519540 THAP5Q7Z6K1 395 aa17.38■□□□□ 0.37
FAM49B-214ENST00000519540 GALNT5Q7Z7M9 940 aa17.38■□□□□ 0.37
FAM49B-214ENST00000519540 SAMD14Q8IZD0 417 aaPredicted RBP17.38■□□□□ 0.37
FAM49B-214ENST00000519540 C8orf59Q8N0T1 100 aaPredicted RBP17.38■□□□□ 0.37
FAM49B-214ENST00000519540 PIK3C3Q8NEB9 887 aa17.38■□□□□ 0.37
FAM49B-214ENST00000519540 MIPOL1Q8TD10 442 aa17.38■□□□□ 0.37
FAM49B-214ENST00000519540 APOBEC4Q8WW27 367 aaKnown RBP17.38■□□□□ 0.37
FAM49B-214ENST00000519540 TREX2Q9BQ50 279 aaPredicted RBP17.38■□□□□ 0.37
FAM49B-214ENST00000519540 YIPF4Q9BSR8 244 aa17.38■□□□□ 0.37
FAM49B-214ENST00000519540 GRIP2Q9C0E4 1043 aa17.38■□□□□ 0.37
FAM49B-214ENST00000519540 IL21RQ9HBE5 538 aa17.38■□□□□ 0.37
FAM49B-214ENST00000519540 STARD5Q9NSY2 213 aa17.38■□□□□ 0.37
FAM49B-214ENST00000519540 C19orf67A6NJJ6 358 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms