RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 SAMD14Q8IZD0 417 aaPredicted RBP8.66□□□□□ -1.02
HDAC3-215ENST00000519474 FAM98AQ8NCA5 519 aaKnown RBP8.66□□□□□ -1.02
HDAC3-215ENST00000519474 OR5L2Q8NGL0 311 aa8.66□□□□□ -1.02
HDAC3-215ENST00000519474 FAM76AQ8TAV0 307 aa8.66□□□□□ -1.02
HDAC3-215ENST00000519474 CHTF18Q8WVB6 975 aa8.66□□□□□ -1.02
HDAC3-215ENST00000519474 RSRC1Q96IZ7 334 aaKnown RBP8.66□□□□□ -1.02
HDAC3-215ENST00000519474 DGAT2Q96PD7 388 aa8.66□□□□□ -1.02
HDAC3-215ENST00000519474 ERVK-6Q9BXR3 956 aa8.66□□□□□ -1.02
HDAC3-215ENST00000519474 MRPL1Q9BYD6 325 aaKnown RBP8.66□□□□□ -1.02
HDAC3-215ENST00000519474 LYARQ9NX58 379 aaKnown RBP8.66□□□□□ -1.02
HDAC3-215ENST00000519474 AHSPQ9NZD4 102 aa8.66□□□□□ -1.02
HDAC3-215ENST00000519474 C6orf203Q9P0P8 240 aaPredicted RBP8.66□□□□□ -1.02
HDAC3-215ENST00000519474 ZMAT5Q9UDW3 170 aaKnown RBP8.66□□□□□ -1.02
HDAC3-215ENST00000519474 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.66□□□□□ -1.02
HDAC3-215ENST00000519474 DCDC2Q9UHG0 476 aa8.66□□□□□ -1.02
HDAC3-215ENST00000519474 ADAM29Q9UKF5 820 aa8.66□□□□□ -1.02
HDAC3-215ENST00000519474 CES1P1Q9UKY3 287 aa8.66□□□□□ -1.02
HDAC3-215ENST00000519474 HRH3Q9Y5N1 445 aa8.66□□□□□ -1.02
HDAC3-215ENST00000519474 SPENQ96T58 3664 aaKnown RBP8.66□□□□□ -1.02
HDAC3-215ENST00000519474 GTF3C1Q12789 2109 aa8.66□□□□□ -1.02
HDAC3-215ENST00000519474 EML6Q6ZMW3 1958 aa8.65□□□□□ -1.02
HDAC3-215ENST00000519474 TRGV8A0A0C4DH27 118 aa8.65□□□□□ -1.02
HDAC3-215ENST00000519474 A8MVJ9 347 aa8.65□□□□□ -1.02
HDAC3-215ENST00000519474 G3V2L1 256 aa8.65□□□□□ -1.02
HDAC3-215ENST00000519474 MANBAO00462 879 aa8.65□□□□□ -1.02
HDAC3-215ENST00000519474 SLC19A2O60779 497 aa8.65□□□□□ -1.02
HDAC3-215ENST00000519474 NADKO95544 446 aaPredicted RBP8.65□□□□□ -1.02
HDAC3-215ENST00000519474 AIFM1O95831 613 aa8.65□□□□□ -1.02
HDAC3-215ENST00000519474 CLPSP04118 112 aa8.65□□□□□ -1.02
HDAC3-215ENST00000519474 GSTA1P08263 222 aa8.65□□□□□ -1.02
HDAC3-215ENST00000519474 SLC35E2P0CK97 266 aa8.65□□□□□ -1.02
HDAC3-215ENST00000519474 ZNF24P17028 368 aa8.65□□□□□ -1.02
HDAC3-215ENST00000519474 S1PR1P21453 382 aa8.65□□□□□ -1.02
HDAC3-215ENST00000519474 ATP5F1P24539 256 aaPredicted RBP8.65□□□□□ -1.02
HDAC3-215ENST00000519474 SOX18P35713 384 aa8.65□□□□□ -1.02
HDAC3-215ENST00000519474 ARL1P40616 181 aaPredicted RBP8.65□□□□□ -1.02
HDAC3-215ENST00000519474 GPR85P60893 370 aa8.65□□□□□ -1.02
HDAC3-215ENST00000519474 GALNT1Q10472 559 aaPredicted RBP8.65□□□□□ -1.02
HDAC3-215ENST00000519474 ASPHQ12797 758 aa8.65□□□□□ -1.02
HDAC3-215ENST00000519474 ZNF791Q3KP31 576 aaPredicted RBP8.65□□□□□ -1.02
HDAC3-215ENST00000519474 TCHHL1Q5QJ38 904 aaPredicted RBP8.65□□□□□ -1.02
HDAC3-215ENST00000519474 CCNYL2Q5T2Q4 361 aa8.65□□□□□ -1.02
HDAC3-215ENST00000519474 C10orf62Q5T681 223 aaPredicted RBP8.65□□□□□ -1.02
HDAC3-215ENST00000519474 DOLPP1Q86YN1 238 aa8.65□□□□□ -1.02
HDAC3-215ENST00000519474 C9orf40Q8IXQ3 194 aa8.65□□□□□ -1.02
HDAC3-215ENST00000519474 GPALPP1Q8IXQ4 340 aa8.65□□□□□ -1.02
HDAC3-215ENST00000519474 ST13P4Q8IZP2 240 aaPredicted RBP8.65□□□□□ -1.02
HDAC3-215ENST00000519474 CYP4Z2PQ8N1L4 340 aa8.65□□□□□ -1.02
HDAC3-215ENST00000519474 ZFP62Q8NB50 900 aaPredicted RBP8.65□□□□□ -1.02
HDAC3-215ENST00000519474 POGLUT1Q8NBL1 392 aa8.65□□□□□ -1.02
HDAC3-215ENST00000519474 OR52N2Q8NGI0 321 aa8.65□□□□□ -1.02
HDAC3-215ENST00000519474 NUBPLQ8TB37 319 aa8.65□□□□□ -1.02
HDAC3-215ENST00000519474 SELENOMQ8WWX9 145 aa8.65□□□□□ -1.02
HDAC3-215ENST00000519474 ASB15Q8WXK1 588 aa8.65□□□□□ -1.02
HDAC3-215ENST00000519474 TIMMDC1Q9NPL8 285 aa8.65□□□□□ -1.02
HDAC3-215ENST00000519474 HPF1Q9NWY4 346 aa8.65□□□□□ -1.02
HDAC3-215ENST00000519474 TEX10Q9NXF1 929 aaPredicted RBP8.65□□□□□ -1.02
HDAC3-215ENST00000519474 DCAF16Q9NXF7 216 aa8.65□□□□□ -1.02
HDAC3-215ENST00000519474 PSMC3IPQ9P2W1 217 aaPredicted RBP8.65□□□□□ -1.02
HDAC3-215ENST00000519474 TRPS1Q9UHF7 1281 aa8.65□□□□□ -1.02
HDAC3-215ENST00000519474 EMCNQ9ULC0 261 aa8.65□□□□□ -1.02
HDAC3-215ENST00000519474 SLC12A4Q9UP95 1085 aa8.65□□□□□ -1.02
HDAC3-215ENST00000519474 ERVK-11Q9UQG0 969 aa8.65□□□□□ -1.02
HDAC3-215ENST00000519474 KLF13Q9Y2Y9 288 aaPredicted RBP8.65□□□□□ -1.02
HDAC3-215ENST00000519474 ARHGAP10A1A4S6 786 aa8.64□□□□□ -1.03
HDAC3-215ENST00000519474 HS6ST1O60243 411 aa8.64□□□□□ -1.03
HDAC3-215ENST00000519474 PDE9AO76083 593 aa8.64□□□□□ -1.03
HDAC3-215ENST00000519474 MLYCDO95822 493 aa8.64□□□□□ -1.03
HDAC3-215ENST00000519474 CT62P0C5K7 136 aa8.64□□□□□ -1.03
HDAC3-215ENST00000519474 COX7A2P14406 83 aa8.64□□□□□ -1.03
HDAC3-215ENST00000519474 RFC3P40938 356 aa8.64□□□□□ -1.03
HDAC3-215ENST00000519474 XKP51811 444 aa8.64□□□□□ -1.03
HDAC3-215ENST00000519474 PER3P56645 1201 aa8.64□□□□□ -1.03
HDAC3-215ENST00000519474 SLC37A1P57057 533 aa8.64□□□□□ -1.03
HDAC3-215ENST00000519474 ERVK-8P63133 956 aa8.64□□□□□ -1.03
HDAC3-215ENST00000519474 HSF1Q00613 529 aa8.64□□□□□ -1.03
HDAC3-215ENST00000519474 RBPJQ06330 500 aa8.64□□□□□ -1.03
HDAC3-215ENST00000519474 FUT7Q11130 342 aa8.64□□□□□ -1.03
HDAC3-215ENST00000519474 SPRED3Q2MJR0 410 aa8.64□□□□□ -1.03
HDAC3-215ENST00000519474 CMPK2Q5EBM0 449 aa8.64□□□□□ -1.03
HDAC3-215ENST00000519474 NDUFAF5Q5TEU4 345 aa8.64□□□□□ -1.03
HDAC3-215ENST00000519474 ZNF787Q6DD87 383 aa8.64□□□□□ -1.03
HDAC3-215ENST00000519474 OPN5Q6U736 354 aa8.64□□□□□ -1.03
HDAC3-215ENST00000519474 PAGE2Q7Z2X7 111 aa8.64□□□□□ -1.03
HDAC3-215ENST00000519474 NUDT13Q86X67 352 aa8.64□□□□□ -1.03
HDAC3-215ENST00000519474 TDRPQ86YL5 185 aa8.64□□□□□ -1.03
HDAC3-215ENST00000519474 SLC22A9Q8IVM8 553 aa8.64□□□□□ -1.03
HDAC3-215ENST00000519474 TRIM42Q8IWZ5 723 aa8.64□□□□□ -1.03
HDAC3-215ENST00000519474 MMP21Q8N119 569 aa8.64□□□□□ -1.03
HDAC3-215ENST00000519474 GHDCQ8N2G8 530 aa8.64□□□□□ -1.03
HDAC3-215ENST00000519474 ARL6IP6Q8N6S5 226 aa8.64□□□□□ -1.03
HDAC3-215ENST00000519474 CDYL2Q8N8U2 506 aa8.64□□□□□ -1.03
HDAC3-215ENST00000519474 PSD4Q8NDX1 1056 aa8.64□□□□□ -1.03
HDAC3-215ENST00000519474 OR2M7Q8NG81 312 aa8.64□□□□□ -1.03
HDAC3-215ENST00000519474 OR4K14Q8NGD5 310 aa8.64□□□□□ -1.03
HDAC3-215ENST00000519474 METTL6Q8TCB7 284 aa8.64□□□□□ -1.03
HDAC3-215ENST00000519474 MIPOL1Q8TD10 442 aa8.64□□□□□ -1.03
HDAC3-215ENST00000519474 ITLN2Q8WWU7 325 aaPredicted RBP8.64□□□□□ -1.03
HDAC3-215ENST00000519474 RIT1Q92963 219 aa8.64□□□□□ -1.03
HDAC3-215ENST00000519474 L3HYPDHQ96EM0 354 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms