RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 MMP24Q9Y5R2 645 aa2.99□□□□□ -1.93
VPS13B-207ENST00000518569 ADGRL1O94910 1474 aa2.98□□□□□ -1.93
VPS13B-207ENST00000518569 IFT140Q96RY7 1462 aa2.98□□□□□ -1.93
VPS13B-207ENST00000518569 LRRIQ4A6NIV6 560 aa2.98□□□□□ -1.93
VPS13B-207ENST00000518569 GPR89AB7ZAQ6 455 aa2.98□□□□□ -1.93
VPS13B-207ENST00000518569 ANHXE9PGG2 379 aa2.98□□□□□ -1.93
VPS13B-207ENST00000518569 KIF2AO00139 706 aaPredicted RBP2.98□□□□□ -1.93
VPS13B-207ENST00000518569 RTN2O75298 545 aa2.98□□□□□ -1.93
VPS13B-207ENST00000518569 ADCY5O95622 1261 aa2.98□□□□□ -1.93
VPS13B-207ENST00000518569 GSTA2P09210 222 aa2.98□□□□□ -1.93
VPS13B-207ENST00000518569 TPM1P09493 284 aa2.98□□□□□ -1.93
VPS13B-207ENST00000518569 GPR89BP0CG08 455 aa2.98□□□□□ -1.93
VPS13B-207ENST00000518569 ADORA3P0DMS8 318 aa2.98□□□□□ -1.93
VPS13B-207ENST00000518569 PBLDP30039 288 aaPredicted RBP2.98□□□□□ -1.93
VPS13B-207ENST00000518569 ADSSP30520 456 aa2.98□□□□□ -1.93
VPS13B-207ENST00000518569 OXTRP30559 389 aa2.98□□□□□ -1.93
VPS13B-207ENST00000518569 SERPINB6P35237 376 aa2.98□□□□□ -1.93
VPS13B-207ENST00000518569 PTGER3P43115 390 aa2.98□□□□□ -1.93
VPS13B-207ENST00000518569 MAGEA8P43361 318 aa2.98□□□□□ -1.93
VPS13B-207ENST00000518569 MTIF2P46199 727 aaKnown RBP2.98□□□□□ -1.93
VPS13B-207ENST00000518569 ZFP36L2P47974 494 aaKnown RBP2.98□□□□□ -1.93
VPS13B-207ENST00000518569 FHITP49789 147 aa2.98□□□□□ -1.93
VPS13B-207ENST00000518569 RIDAP52758 137 aaKnown RBP2.98□□□□□ -1.93
VPS13B-207ENST00000518569 NDUFV3P56181 108 aaKnown RBP2.98□□□□□ -1.93
VPS13B-207ENST00000518569 HAND2P61296 217 aa2.98□□□□□ -1.93
VPS13B-207ENST00000518569 HTD2P86397 168 aa2.98□□□□□ -1.93
VPS13B-207ENST00000518569 MECOMQ03112 1051 aa2.98□□□□□ -1.93
VPS13B-207ENST00000518569 GABPB1Q06547 395 aaPredicted RBP2.98□□□□□ -1.93
VPS13B-207ENST00000518569 RBBP4Q09028 425 aa2.98□□□□□ -1.93
VPS13B-207ENST00000518569 RIGQ13278 110 aa2.98□□□□□ -1.93
VPS13B-207ENST00000518569 SNX1Q13596 522 aa2.98□□□□□ -1.93
VPS13B-207ENST00000518569 MEF2DQ14814 521 aa2.98□□□□□ -1.93
VPS13B-207ENST00000518569 SPHARQ15513 63 aa2.98□□□□□ -1.93
VPS13B-207ENST00000518569 KNOP1Q1ED39 458 aaKnown RBP2.98□□□□□ -1.93
VPS13B-207ENST00000518569 RABL6Q3YEC7 729 aaPredicted RBP2.98□□□□□ -1.93
VPS13B-207ENST00000518569 LYPLAL1Q5VWZ2 237 aa2.98□□□□□ -1.93
VPS13B-207ENST00000518569 SNRNP48Q6IEG0 339 aaKnown RBP2.98□□□□□ -1.93
VPS13B-207ENST00000518569 TMEM64Q6YI46 380 aa2.98□□□□□ -1.93
VPS13B-207ENST00000518569 C17orf64Q86WR6 236 aa2.98□□□□□ -1.93
VPS13B-207ENST00000518569 CACUL1Q86Y37 369 aa2.98□□□□□ -1.93
VPS13B-207ENST00000518569 TMEM126BQ8IUX1 230 aa2.98□□□□□ -1.93
VPS13B-207ENST00000518569 TBC1D10CQ8IV04 446 aa2.98□□□□□ -1.93
VPS13B-207ENST00000518569 LYG1Q8N1E2 194 aa2.98□□□□□ -1.93
VPS13B-207ENST00000518569 THEM5Q8N1Q8 247 aa2.98□□□□□ -1.93
VPS13B-207ENST00000518569 HDDC3Q8N4P3 179 aa2.98□□□□□ -1.93
VPS13B-207ENST00000518569 ZBTB44Q8NCP5 570 aa2.98□□□□□ -1.93
VPS13B-207ENST00000518569 IPMKQ8NFU5 416 aa2.98□□□□□ -1.93
VPS13B-207ENST00000518569 SSC4DQ8WTU2 575 aa2.98□□□□□ -1.93
VPS13B-207ENST00000518569 LIPHQ8WWY8 451 aa2.98□□□□□ -1.93
VPS13B-207ENST00000518569 ZNF274Q96GC6 653 aaPredicted RBP2.98□□□□□ -1.93
VPS13B-207ENST00000518569 PDLIM5Q96HC4 596 aaKnown RBP2.98□□□□□ -1.93
VPS13B-207ENST00000518569 COG3Q96JB2 828 aa2.98□□□□□ -1.93
VPS13B-207ENST00000518569 CABS1Q96KC9 395 aa2.98□□□□□ -1.93
VPS13B-207ENST00000518569 SSX3Q99909 188 aa2.98□□□□□ -1.93
VPS13B-207ENST00000518569 SOSTQ9BQB4 213 aa2.98□□□□□ -1.93
VPS13B-207ENST00000518569 CRACR2AQ9BSW2 395 aa2.98□□□□□ -1.93
VPS13B-207ENST00000518569 NUSAP1Q9BXS6 441 aaKnown RBP2.98□□□□□ -1.93
VPS13B-207ENST00000518569 CACNG6Q9BXT2 260 aa2.98□□□□□ -1.93
VPS13B-207ENST00000518569 KRT23Q9C075 422 aa2.98□□□□□ -1.93
VPS13B-207ENST00000518569 STRADBQ9C0K7 418 aa2.98□□□□□ -1.93
VPS13B-207ENST00000518569 ZNF665Q9H7R5 613 aa2.98□□□□□ -1.93
VPS13B-207ENST00000518569 HEXA-AS1Q9H8Q6 139 aa2.98□□□□□ -1.93
VPS13B-207ENST00000518569 MOB1AQ9H8S9 216 aa2.98□□□□□ -1.93
VPS13B-207ENST00000518569 GNB4Q9HAV0 340 aa2.98□□□□□ -1.93
VPS13B-207ENST00000518569 NMUR1Q9HB89 426 aa2.98□□□□□ -1.93
VPS13B-207ENST00000518569 UBE2TQ9NPD8 197 aaPredicted RBP2.98□□□□□ -1.93
VPS13B-207ENST00000518569 POLE3Q9NRF9 147 aa2.98□□□□□ -1.93
VPS13B-207ENST00000518569 MED17Q9NVC6 651 aa2.98□□□□□ -1.93
VPS13B-207ENST00000518569 TAS2R3Q9NYW6 316 aa2.98□□□□□ -1.93
VPS13B-207ENST00000518569 ACTR3BQ9P1U1 418 aa2.98□□□□□ -1.93
VPS13B-207ENST00000518569 TRPC4Q9UBN4 977 aa2.98□□□□□ -1.93
VPS13B-207ENST00000518569 KCNK6Q9Y257 313 aa2.98□□□□□ -1.93
VPS13B-207ENST00000518569 CSAG2Q9Y5P2 127 aa2.98□□□□□ -1.93
VPS13B-207ENST00000518569 AKNAQ7Z591 1439 aa2.98□□□□□ -1.93
VPS13B-207ENST00000518569 MROH2BQ7Z745 1585 aa2.98□□□□□ -1.93
VPS13B-207ENST00000518569 KIAA1217Q5T5P2 1943 aa2.97□□□□□ -1.93
VPS13B-207ENST00000518569 TARBP1Q13395 1621 aaKnown RBP2.97□□□□□ -1.93
VPS13B-207ENST00000518569 AQRO60306 1485 aaKnown RBP eCLIP2.97□□□□□ -1.93
VPS13B-207ENST00000518569 GAPVD1Q14C86 1478 aa2.97□□□□□ -1.93
VPS13B-207ENST00000518569 IGKV3D-20A0A0C4DH25 116 aa2.97□□□□□ -1.93
VPS13B-207ENST00000518569 TMEM129A0AVI4 362 aa2.97□□□□□ -1.93
VPS13B-207ENST00000518569 K7EQG2 157 aa2.97□□□□□ -1.93
VPS13B-207ENST00000518569 L7N2F9 121 aa2.97□□□□□ -1.93
VPS13B-207ENST00000518569 CETN3O15182 167 aa2.97□□□□□ -1.93
VPS13B-207ENST00000518569 SPOPO43791 374 aa2.97□□□□□ -1.93
VPS13B-207ENST00000518569 CSDE1O75534 798 aaKnown RBP2.97□□□□□ -1.93
VPS13B-207ENST00000518569 TRIM16O95361 564 aa2.97□□□□□ -1.93
VPS13B-207ENST00000518569 IGHG1P01857 330 aa2.97□□□□□ -1.93
VPS13B-207ENST00000518569 CYP3A5P20815 502 aa2.97□□□□□ -1.93
VPS13B-207ENST00000518569 GJB2P29033 226 aa2.97□□□□□ -1.93
VPS13B-207ENST00000518569 OR1D2P34982 312 aa2.97□□□□□ -1.93
VPS13B-207ENST00000518569 CTNNB1P35222 781 aa2.97□□□□□ -1.93
VPS13B-207ENST00000518569 ETV5P41161 510 aa2.97□□□□□ -1.93
VPS13B-207ENST00000518569 TAF6P49848 677 aa2.97□□□□□ -1.93
VPS13B-207ENST00000518569 NT5C2P49902 561 aa2.97□□□□□ -1.93
VPS13B-207ENST00000518569 SERPINH1P50454 418 aaKnown RBP2.97□□□□□ -1.93
VPS13B-207ENST00000518569 ETV1P50549 477 aa2.97□□□□□ -1.93
VPS13B-207ENST00000518569 FCHO2Q0JRZ9 810 aa2.97□□□□□ -1.93
VPS13B-207ENST00000518569 RCN2Q14257 317 aa2.97□□□□□ -1.93
VPS13B-207ENST00000518569 RPS6KA1Q15418 735 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms