RNA–Protein interactions for RNA: ENST00000516989.1

SCARNA6.1-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 238 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6.1-201ENST00000516989 CLYBLQ8N0X4 340 aa5.47□□□□□ -1.53
SCARNA6.1-201ENST00000516989 MIER2Q8N344 545 aa5.47□□□□□ -1.53
SCARNA6.1-201ENST00000516989 OR2L5Q8NG80 312 aa5.47□□□□□ -1.53
SCARNA6.1-201ENST00000516989 OR5T3Q8NGG3 340 aa5.47□□□□□ -1.53
SCARNA6.1-201ENST00000516989 OR51Q1Q8NH59 317 aa5.47□□□□□ -1.53
SCARNA6.1-201ENST00000516989 STT3BQ8TCJ2 826 aa5.47□□□□□ -1.53
SCARNA6.1-201ENST00000516989 PHOSPHO1Q8TCT1 267 aa5.47□□□□□ -1.53
SCARNA6.1-201ENST00000516989 AGR3Q8TD06 166 aa5.47□□□□□ -1.53
SCARNA6.1-201ENST00000516989 AGAP11Q8TF27 550 aa5.47□□□□□ -1.53
SCARNA6.1-201ENST00000516989 DYDC1Q8WWB3 177 aa5.47□□□□□ -1.53
SCARNA6.1-201ENST00000516989 STARD8Q92502 1023 aa5.47□□□□□ -1.53
SCARNA6.1-201ENST00000516989 RGMAQ96B86 450 aa5.47□□□□□ -1.53
SCARNA6.1-201ENST00000516989 MIEF2Q96C03 454 aa5.47□□□□□ -1.53
SCARNA6.1-201ENST00000516989 MISP3Q96FF7 219 aa5.47□□□□□ -1.53
SCARNA6.1-201ENST00000516989 PEX11GQ96HA9 241 aa5.47□□□□□ -1.53
SCARNA6.1-201ENST00000516989 SMIM10Q96HG1 83 aa5.47□□□□□ -1.53
SCARNA6.1-201ENST00000516989 ALPK1Q96QP1 1244 aa5.47□□□□□ -1.53
SCARNA6.1-201ENST00000516989 KCNA7Q96RP8 456 aa5.47□□□□□ -1.53
SCARNA6.1-201ENST00000516989 HBEGFQ99075 208 aa5.47□□□□□ -1.53
SCARNA6.1-201ENST00000516989 SERPINI1Q99574 410 aa5.47□□□□□ -1.53
SCARNA6.1-201ENST00000516989 TBCDQ9BTW9 1192 aa5.47□□□□□ -1.53
SCARNA6.1-201ENST00000516989 TRMOQ9BU70 441 aa5.47□□□□□ -1.53
SCARNA6.1-201ENST00000516989 SORBS1Q9BX66 1292 aaKnown RBP5.47□□□□□ -1.53
SCARNA6.1-201ENST00000516989 MS4A8Q9BY19 250 aa5.47□□□□□ -1.53
SCARNA6.1-201ENST00000516989 AICDAQ9GZX7 198 aa5.47□□□□□ -1.53
SCARNA6.1-201ENST00000516989 COPS7BQ9H9Q2 264 aaPredicted RBP5.47□□□□□ -1.53
SCARNA6.1-201ENST00000516989 DMRT3Q9NQL9 472 aa5.47□□□□□ -1.53
SCARNA6.1-201ENST00000516989 PRDM7Q9NQW5 492 aa5.47□□□□□ -1.53
SCARNA6.1-201ENST00000516989 FARSBQ9NSD9 589 aaKnown RBP5.47□□□□□ -1.53
SCARNA6.1-201ENST00000516989 PSD3Q9NYI0 1048 aa5.47□□□□□ -1.53
SCARNA6.1-201ENST00000516989 HCN3Q9P1Z3 774 aa5.47□□□□□ -1.53
SCARNA6.1-201ENST00000516989 SLC12A4Q9UP95 1085 aa5.47□□□□□ -1.53
SCARNA6.1-201ENST00000516989 PADI2Q9Y2J8 665 aa5.47□□□□□ -1.53
SCARNA6.1-201ENST00000516989 PTRH2Q9Y3E5 179 aaKnown RBP5.47□□□□□ -1.53
SCARNA6.1-201ENST00000516989 TSC22D4Q9Y3Q8 395 aa5.47□□□□□ -1.53
SCARNA6.1-201ENST00000516989 SPEGQ15772 3267 aa5.47□□□□□ -1.53
SCARNA6.1-201ENST00000516989 APC2O95996 2303 aa5.47□□□□□ -1.53
SCARNA6.1-201ENST00000516989 SCN3AQ9NY46 2000 aa5.47□□□□□ -1.53
SCARNA6.1-201ENST00000516989 SDK2Q58EX2 2172 aa5.46□□□□□ -1.53
SCARNA6.1-201ENST00000516989 MDC1Q14676 2089 aaKnown RBP5.46□□□□□ -1.53
SCARNA6.1-201ENST00000516989 A0A087WV48 116 aa5.46□□□□□ -1.54
SCARNA6.1-201ENST00000516989 ARHGAP10A1A4S6 786 aa5.46□□□□□ -1.54
SCARNA6.1-201ENST00000516989 FAM181BA6NEQ2 426 aa5.46□□□□□ -1.54
SCARNA6.1-201ENST00000516989 OR2W5A6NFC9 320 aa5.46□□□□□ -1.54
SCARNA6.1-201ENST00000516989 NOTOA8MTQ0 251 aa5.46□□□□□ -1.54
SCARNA6.1-201ENST00000516989 TMEM114B3SHH9 223 aa5.46□□□□□ -1.54
SCARNA6.1-201ENST00000516989 ATP8B1O43520 1251 aa5.46□□□□□ -1.54
SCARNA6.1-201ENST00000516989 ITM2AO43736 263 aa5.46□□□□□ -1.54
SCARNA6.1-201ENST00000516989 JRKO75564 520 aa5.46□□□□□ -1.54
SCARNA6.1-201ENST00000516989 LYPLA1O75608 230 aaPredicted RBP5.46□□□□□ -1.54
SCARNA6.1-201ENST00000516989 CREG1O75629 220 aa5.46□□□□□ -1.54
SCARNA6.1-201ENST00000516989 CDC123O75794 336 aaPredicted RBP5.46□□□□□ -1.54
SCARNA6.1-201ENST00000516989 KLF7O75840 302 aaPredicted RBP5.46□□□□□ -1.54
SCARNA6.1-201ENST00000516989 ETHE1O95571 254 aa5.46□□□□□ -1.54
SCARNA6.1-201ENST00000516989 CHEK2O96017 543 aa5.46□□□□□ -1.54
SCARNA6.1-201ENST00000516989 KLK1P06870 262 aa5.46□□□□□ -1.54
SCARNA6.1-201ENST00000516989 CHRNGP07510 517 aa5.46□□□□□ -1.54
SCARNA6.1-201ENST00000516989 HEXBP07686 556 aa5.46□□□□□ -1.54
SCARNA6.1-201ENST00000516989 FGF4P08620 206 aa5.46□□□□□ -1.54
SCARNA6.1-201ENST00000516989 UROSP10746 265 aa5.46□□□□□ -1.54
SCARNA6.1-201ENST00000516989 OSMP13725 252 aa5.46□□□□□ -1.54
SCARNA6.1-201ENST00000516989 CHN1P15882 459 aa5.46□□□□□ -1.54
SCARNA6.1-201ENST00000516989 WT1P19544 449 aaPredicted RBP5.46□□□□□ -1.54
SCARNA6.1-201ENST00000516989 IL10P22301 178 aa5.46□□□□□ -1.54
SCARNA6.1-201ENST00000516989 CPN2P22792 545 aa5.46□□□□□ -1.54
SCARNA6.1-201ENST00000516989 ATP5A1P25705 553 aaKnown RBP5.46□□□□□ -1.54
SCARNA6.1-201ENST00000516989 CERS1P27544 350 aa5.46□□□□□ -1.54
SCARNA6.1-201ENST00000516989 OTX2P32243 289 aa5.46□□□□□ -1.54
SCARNA6.1-201ENST00000516989 SERPINB5P36952 375 aa5.46□□□□□ -1.54
SCARNA6.1-201ENST00000516989 SSR2P43308 183 aa5.46□□□□□ -1.54
SCARNA6.1-201ENST00000516989 XCR1P46094 333 aa5.46□□□□□ -1.54
SCARNA6.1-201ENST00000516989 SLC1A6P48664 564 aa5.46□□□□□ -1.54
SCARNA6.1-201ENST00000516989 HTR6P50406 440 aa5.46□□□□□ -1.54
SCARNA6.1-201ENST00000516989 HK2P52789 917 aa5.46□□□□□ -1.54
SCARNA6.1-201ENST00000516989 EMP2P54851 167 aa5.46□□□□□ -1.54
SCARNA6.1-201ENST00000516989 UCNP55089 124 aa5.46□□□□□ -1.54
SCARNA6.1-201ENST00000516989 MANFP55145 182 aaKnown RBP5.46□□□□□ -1.54
SCARNA6.1-201ENST00000516989 MTTPP55157 894 aa5.46□□□□□ -1.54
SCARNA6.1-201ENST00000516989 TMPRSS3P57727 454 aa5.46□□□□□ -1.54
SCARNA6.1-201ENST00000516989 ABCE1P61221 599 aaKnown RBP5.46□□□□□ -1.54
SCARNA6.1-201ENST00000516989 MC1RQ01726 317 aa5.46□□□□□ -1.54
SCARNA6.1-201ENST00000516989 CHRNEQ04844 493 aa5.46□□□□□ -1.54
SCARNA6.1-201ENST00000516989 SLAMF1Q13291 335 aa5.46□□□□□ -1.54
SCARNA6.1-201ENST00000516989 CUL3Q13618 768 aa5.46□□□□□ -1.54
SCARNA6.1-201ENST00000516989 RUNX2Q13950 521 aa5.46□□□□□ -1.54
SCARNA6.1-201ENST00000516989 RCN2Q14257 317 aa5.46□□□□□ -1.54
SCARNA6.1-201ENST00000516989 GALEQ14376 348 aa5.46□□□□□ -1.54
SCARNA6.1-201ENST00000516989 SSPNQ14714 243 aa5.46□□□□□ -1.54
SCARNA6.1-201ENST00000516989 ABRAXAS2Q15018 415 aa5.46□□□□□ -1.54
SCARNA6.1-201ENST00000516989 ADPRMQ3LIE5 342 aa5.46□□□□□ -1.54
SCARNA6.1-201ENST00000516989 SH2D4BQ5SQS7 431 aa5.46□□□□□ -1.54
SCARNA6.1-201ENST00000516989 C10orf62Q5T681 223 aaPredicted RBP5.46□□□□□ -1.54
SCARNA6.1-201ENST00000516989 ATG16L1Q676U5 607 aa5.46□□□□□ -1.54
SCARNA6.1-201ENST00000516989 BICRALQ6AI39 1079 aa5.46□□□□□ -1.54
SCARNA6.1-201ENST00000516989 CLEC6AQ6EIG7 209 aa5.46□□□□□ -1.54
SCARNA6.1-201ENST00000516989 FAAH2Q6GMR7 532 aa5.46□□□□□ -1.54
SCARNA6.1-201ENST00000516989 CYP20A1Q6UW02 462 aa5.46□□□□□ -1.54
SCARNA6.1-201ENST00000516989 FAM198BQ6UWH4 519 aa5.46□□□□□ -1.54
SCARNA6.1-201ENST00000516989 COX15Q7KZN9 410 aa5.46□□□□□ -1.54
SCARNA6.1-201ENST00000516989 TMEM151BQ8IW70 566 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms