RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 RASL10AQ92737 203 aa4.09□□□□□ -1.75
HMGCS1-207ENST00000514610 P3H4Q92791 437 aa4.09□□□□□ -1.75
HMGCS1-207ENST00000514610 CAPNS2Q96L46 248 aa4.09□□□□□ -1.75
HMGCS1-207ENST00000514610 NAP1L3Q99457 506 aaPredicted RBP4.09□□□□□ -1.75
HMGCS1-207ENST00000514610 TEX13AQ9BXU3 409 aaPredicted RBP4.09□□□□□ -1.75
HMGCS1-207ENST00000514610 TRIM10Q9UDY6 481 aa4.09□□□□□ -1.75
HMGCS1-207ENST00000514610 RARRES3Q9UL19 164 aa4.09□□□□□ -1.75
HMGCS1-207ENST00000514610 MRPS2Q9Y399 296 aaKnown RBP4.09□□□□□ -1.75
HMGCS1-207ENST00000514610 FBXO7Q9Y3I1 522 aa4.09□□□□□ -1.75
HMGCS1-207ENST00000514610 AUP1Q9Y679 476 aa4.09□□□□□ -1.75
HMGCS1-207ENST00000514610 TRBV2A0A0J9YWF9 115 aa4.08□□□□□ -1.76
HMGCS1-207ENST00000514610 TEX48A0A1B0GUV7 120 aa4.08□□□□□ -1.76
HMGCS1-207ENST00000514610 MEI4A8MW99 385 aa4.08□□□□□ -1.76
HMGCS1-207ENST00000514610 EEF2KO00418 725 aaKnown RBP4.08□□□□□ -1.76
HMGCS1-207ENST00000514610 ABCC9O60706 1549 aa4.08□□□□□ -1.76
HMGCS1-207ENST00000514610 KRT5P13647 590 aa4.08□□□□□ -1.76
HMGCS1-207ENST00000514610 PPP2R1AP30153 589 aa4.08□□□□□ -1.76
HMGCS1-207ENST00000514610 TRIM23P36406 574 aa4.08□□□□□ -1.76
HMGCS1-207ENST00000514610 CASP9P55211 416 aa4.08□□□□□ -1.76
HMGCS1-207ENST00000514610 PPP1R8Q12972 351 aaKnown RBP4.08□□□□□ -1.76
HMGCS1-207ENST00000514610 KLF5Q13887 457 aaPredicted RBP4.08□□□□□ -1.76
HMGCS1-207ENST00000514610 TCTEX1D4Q5JR98 221 aa4.08□□□□□ -1.76
HMGCS1-207ENST00000514610 LIPJQ5W064 366 aa4.08□□□□□ -1.76
HMGCS1-207ENST00000514610 STEAP1BQ6NZ63 245 aa4.08□□□□□ -1.76
HMGCS1-207ENST00000514610 REG3GQ6UW15 175 aa4.08□□□□□ -1.76
HMGCS1-207ENST00000514610 SLC22A16Q86VW1 577 aa4.08□□□□□ -1.76
HMGCS1-207ENST00000514610 EXOC6Q8TAG9 804 aa4.08□□□□□ -1.76
HMGCS1-207ENST00000514610 FAM222BQ8WU58 562 aa4.08□□□□□ -1.76
HMGCS1-207ENST00000514610 ANKRD27Q96NW4 1050 aa4.08□□□□□ -1.76
HMGCS1-207ENST00000514610 SPAG8Q99932 426 aaPredicted RBP4.08□□□□□ -1.76
HMGCS1-207ENST00000514610 HSD17B14Q9BPX1 270 aa4.08□□□□□ -1.76
HMGCS1-207ENST00000514610 LRRCC1Q9C099 1032 aa4.08□□□□□ -1.76
HMGCS1-207ENST00000514610 TRPV6Q9H1D0 765 aa4.08□□□□□ -1.76
HMGCS1-207ENST00000514610 A0A0U1RRA0 63 aa4.07□□□□□ -1.76
HMGCS1-207ENST00000514610 SYCE3A1L190 88 aa4.07□□□□□ -1.76
HMGCS1-207ENST00000514610 BCLAF3A2AJT9 711 aaKnown RBP4.07□□□□□ -1.76
HMGCS1-207ENST00000514610 SLC9B1P1A6NJY1 282 aa4.07□□□□□ -1.76
HMGCS1-207ENST00000514610 SH2D1BO14796 132 aa4.07□□□□□ -1.76
HMGCS1-207ENST00000514610 TSPAN2O60636 221 aa4.07□□□□□ -1.76
HMGCS1-207ENST00000514610 RENP00797 406 aa4.07□□□□□ -1.76
HMGCS1-207ENST00000514610 FCER2P06734 321 aa4.07□□□□□ -1.76
HMGCS1-207ENST00000514610 FOLR2P14207 255 aa4.07□□□□□ -1.76
HMGCS1-207ENST00000514610 ACADSP16219 412 aa4.07□□□□□ -1.76
HMGCS1-207ENST00000514610 ZNF18P17022 549 aa4.07□□□□□ -1.76
HMGCS1-207ENST00000514610 AHCYP23526 432 aa4.07□□□□□ -1.76
HMGCS1-207ENST00000514610 ALDH3B1P43353 468 aa4.07□□□□□ -1.76
HMGCS1-207ENST00000514610 CCL11P51671 97 aa4.07□□□□□ -1.76
HMGCS1-207ENST00000514610 NLRP11P59045 1033 aaKnown RBP4.07□□□□□ -1.76
HMGCS1-207ENST00000514610 RPS4XP62701 263 aaKnown RBP4.07□□□□□ -1.76
HMGCS1-207ENST00000514610 CCZ1BP86790 482 aa4.07□□□□□ -1.76
HMGCS1-207ENST00000514610 CCZ1P86791 482 aaPredicted RBP4.07□□□□□ -1.76
HMGCS1-207ENST00000514610 TRADDQ15628 312 aa4.07□□□□□ -1.76
HMGCS1-207ENST00000514610 PCK2Q16822 640 aa4.07□□□□□ -1.76
HMGCS1-207ENST00000514610 UNC50Q53HI1 259 aa4.07□□□□□ -1.76
HMGCS1-207ENST00000514610 LEMD1Q68G75 181 aa4.07□□□□□ -1.76
HMGCS1-207ENST00000514610 EMBQ6PCB8 327 aa4.07□□□□□ -1.76
HMGCS1-207ENST00000514610 BNIPLQ7Z465 357 aa4.07□□□□□ -1.76
HMGCS1-207ENST00000514610 SLC25A42Q86VD7 318 aa4.07□□□□□ -1.76
HMGCS1-207ENST00000514610 POM121L12Q8N7R1 296 aa4.07□□□□□ -1.76
HMGCS1-207ENST00000514610 ZNF491Q8N8L2 437 aa4.07□□□□□ -1.76
HMGCS1-207ENST00000514610 ICA1LQ8NDH6 482 aa4.07□□□□□ -1.76
HMGCS1-207ENST00000514610 RAB11FIP5Q9BXF6 653 aa4.07□□□□□ -1.76
HMGCS1-207ENST00000514610 UBXN6Q9BZV1 441 aa4.07□□□□□ -1.76
HMGCS1-207ENST00000514610 COPS7AQ9UBW8 275 aa4.07□□□□□ -1.76
HMGCS1-207ENST00000514610 IL19Q9UHD0 177 aa4.07□□□□□ -1.76
HMGCS1-207ENST00000514610 FAM153AQ9UHL3 310 aa4.07□□□□□ -1.76
HMGCS1-207ENST00000514610 TSPAN16Q9UKR8 245 aa4.07□□□□□ -1.76
HMGCS1-207ENST00000514610 MGAT4AQ9UM21 535 aa4.07□□□□□ -1.76
HMGCS1-207ENST00000514610 KLHDC2Q9Y2U9 406 aa4.07□□□□□ -1.76
HMGCS1-207ENST00000514610 STRAPQ9Y3F4 350 aaKnown RBP4.07□□□□□ -1.76
HMGCS1-207ENST00000514610 TMEM89A2RUT3 159 aa4.06□□□□□ -1.76
HMGCS1-207ENST00000514610 CHEK1O14757 476 aa4.06□□□□□ -1.76
HMGCS1-207ENST00000514610 GALR3O60755 368 aaPredicted RBP4.06□□□□□ -1.76
HMGCS1-207ENST00000514610 MARCKSP29966 332 aaPredicted RBP4.06□□□□□ -1.76
HMGCS1-207ENST00000514610 ATP6V1E1P36543 226 aa4.06□□□□□ -1.76
HMGCS1-207ENST00000514610 ACADSBP45954 432 aa4.06□□□□□ -1.76
HMGCS1-207ENST00000514610 SLC12A3P55017 1021 aa4.06□□□□□ -1.76
HMGCS1-207ENST00000514610 LMO4P61968 165 aa4.06□□□□□ -1.76
HMGCS1-207ENST00000514610 ZFP36L1Q07352 338 aaKnown RBP4.06□□□□□ -1.76
HMGCS1-207ENST00000514610 CYLC2Q14093 348 aaPredicted RBP4.06□□□□□ -1.76
HMGCS1-207ENST00000514610 TMEM44Q2T9K0 475 aa4.06□□□□□ -1.76
HMGCS1-207ENST00000514610 RHBDD2Q6NTF9 364 aa4.06□□□□□ -1.76
HMGCS1-207ENST00000514610 RFWD3Q6PCD5 774 aa4.06□□□□□ -1.76
HMGCS1-207ENST00000514610 LINC00518Q8N0U6 118 aa4.06□□□□□ -1.76
HMGCS1-207ENST00000514610 CSNK1G2-AS1Q8NCQ2 148 aa4.06□□□□□ -1.76
HMGCS1-207ENST00000514610 CCNYQ8ND76 341 aa4.06□□□□□ -1.76
HMGCS1-207ENST00000514610 KIAA1524Q8TCG1 905 aa4.06□□□□□ -1.76
HMGCS1-207ENST00000514610 NTNG2Q96CW9 530 aa4.06□□□□□ -1.76
HMGCS1-207ENST00000514610 C16orf58Q96GQ5 468 aa4.06□□□□□ -1.76
HMGCS1-207ENST00000514610 SIRPDQ9H106 197 aa4.06□□□□□ -1.76
HMGCS1-207ENST00000514610 SYTL2Q9HCH5 934 aa4.06□□□□□ -1.76
HMGCS1-207ENST00000514610 ANO10Q9NW15 660 aa4.06□□□□□ -1.76
HMGCS1-207ENST00000514610 SLC6A5Q9Y345 797 aa4.06□□□□□ -1.76
HMGCS1-207ENST00000514610 CSAG2Q9Y5P2 127 aa4.06□□□□□ -1.76
HMGCS1-207ENST00000514610 CPQQ9Y646 472 aa4.06□□□□□ -1.76
HMGCS1-207ENST00000514610 SPAG9O60271 1321 aaKnown RBP4.05□□□□□ -1.76
HMGCS1-207ENST00000514610 A0A1B0GTH9 108 aa4.05□□□□□ -1.76
HMGCS1-207ENST00000514610 NME2P1O60361 137 aa4.05□□□□□ -1.76
HMGCS1-207ENST00000514610 HSF2BPO75031 334 aa4.05□□□□□ -1.76
HMGCS1-207ENST00000514610 VENTXO95231 258 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms