RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 CLEC1AQ8NC01 280 aa7.82□□□□□ -1.16
CCL28-204ENST00000514421 OR11G2Q8NGC1 345 aa7.82□□□□□ -1.16
CCL28-204ENST00000514421 OR9I1Q8NGQ6 314 aa7.82□□□□□ -1.16
CCL28-204ENST00000514421 STMN2Q93045 179 aa7.82□□□□□ -1.16
CCL28-204ENST00000514421 ASB9Q96DX5 294 aa7.82□□□□□ -1.16
CCL28-204ENST00000514421 ABHD17AQ96GS6 310 aa7.82□□□□□ -1.16
CCL28-204ENST00000514421 PTCHD1Q96NR3 888 aa7.82□□□□□ -1.16
CCL28-204ENST00000514421 FRG2BQ96QU4 278 aa7.82□□□□□ -1.16
CCL28-204ENST00000514421 CDRT15Q96T59 188 aa7.82□□□□□ -1.16
CCL28-204ENST00000514421 NPAS2Q99743 824 aa7.82□□□□□ -1.16
CCL28-204ENST00000514421 VN1R1Q9GZP7 353 aa7.82□□□□□ -1.16
CCL28-204ENST00000514421 SLC25A18Q9H1K4 315 aa7.82□□□□□ -1.16
CCL28-204ENST00000514421 ELOVL6Q9H5J4 265 aa7.82□□□□□ -1.16
CCL28-204ENST00000514421 COPS7BQ9H9Q2 264 aaPredicted RBP7.82□□□□□ -1.16
CCL28-204ENST00000514421 S100A14Q9HCY8 104 aa7.82□□□□□ -1.16
CCL28-204ENST00000514421 SPAG4Q9NPE6 437 aa7.82□□□□□ -1.16
CCL28-204ENST00000514421 DMRT3Q9NQL9 472 aa7.82□□□□□ -1.16
CCL28-204ENST00000514421 LANCL2Q9NS86 450 aa7.82□□□□□ -1.16
CCL28-204ENST00000514421 AHSPQ9NZD4 102 aa7.82□□□□□ -1.16
CCL28-204ENST00000514421 C19orf25Q9UFG5 118 aaPredicted RBP7.82□□□□□ -1.16
CCL28-204ENST00000514421 BCAP29Q9UHQ4 241 aa7.82□□□□□ -1.16
CCL28-204ENST00000514421 FBXL4Q9UKA2 621 aa7.82□□□□□ -1.16
CCL28-204ENST00000514421 G3BP2Q9UN86 482 aaKnown RBP7.82□□□□□ -1.16
CCL28-204ENST00000514421 SNX6Q9UNH7 406 aa7.82□□□□□ -1.16
CCL28-204ENST00000514421 C15orf41Q9Y2V0 281 aa7.82□□□□□ -1.16
CCL28-204ENST00000514421 PCDHGB7Q9Y5F8 929 aa7.82□□□□□ -1.16
CCL28-204ENST00000514421 COL6A6A6NMZ7 2263 aa7.81□□□□□ -1.16
CCL28-204ENST00000514421 A0A1W2PQ72 361 aa7.81□□□□□ -1.16
CCL28-204ENST00000514421 ASPDHA6ND91 283 aa7.81□□□□□ -1.16
CCL28-204ENST00000514421 OR2W5A6NFC9 320 aa7.81□□□□□ -1.16
CCL28-204ENST00000514421 A6NL46 340 aa7.81□□□□□ -1.16
CCL28-204ENST00000514421 C4orf51C9J302 202 aa7.81□□□□□ -1.16
CCL28-204ENST00000514421 FAM227AF5H4B4 570 aa7.81□□□□□ -1.16
CCL28-204ENST00000514421 H3BNX3 289 aa7.81□□□□□ -1.16
CCL28-204ENST00000514421 SAP18O00422 153 aaKnown RBP7.81□□□□□ -1.16
CCL28-204ENST00000514421 RTCAO00442 366 aaKnown RBP7.81□□□□□ -1.16
CCL28-204ENST00000514421 CLDN4O14493 209 aa7.81□□□□□ -1.16
CCL28-204ENST00000514421 MRASO14807 208 aa7.81□□□□□ -1.16
CCL28-204ENST00000514421 CASQ2O14958 399 aaPredicted RBP7.81□□□□□ -1.16
CCL28-204ENST00000514421 PRMT3O60678 531 aa7.81□□□□□ -1.16
CCL28-204ENST00000514421 ULK1O75385 1050 aa7.81□□□□□ -1.16
CCL28-204ENST00000514421 CEACAM4O75871 244 aa7.81□□□□□ -1.16
CCL28-204ENST00000514421 DNAJB5O75953 348 aa7.81□□□□□ -1.16
CCL28-204ENST00000514421 RSL1D1O76021 490 aaKnown RBP7.81□□□□□ -1.16
CCL28-204ENST00000514421 PDE5AO76074 875 aa7.81□□□□□ -1.16
CCL28-204ENST00000514421 SCELO95171 688 aa7.81□□□□□ -1.16
CCL28-204ENST00000514421 HPP00738 406 aa7.81□□□□□ -1.16
CCL28-204ENST00000514421 KRT6AP02538 564 aa7.81□□□□□ -1.16
CCL28-204ENST00000514421 KRT6BP04259 564 aa7.81□□□□□ -1.16
CCL28-204ENST00000514421 C8BP07358 591 aa7.81□□□□□ -1.16
CCL28-204ENST00000514421 ICAM2P13598 275 aa7.81□□□□□ -1.16
CCL28-204ENST00000514421 HSD17B1P14061 328 aa7.81□□□□□ -1.16
CCL28-204ENST00000514421 ANPEPP15144 967 aa7.81□□□□□ -1.16
CCL28-204ENST00000514421 HIST1H1TP22492 207 aaPredicted RBP7.81□□□□□ -1.16
CCL28-204ENST00000514421 HMOX2P30519 316 aa7.81□□□□□ -1.16
CCL28-204ENST00000514421 TSFMP43897 325 aaKnown RBP7.81□□□□□ -1.16
CCL28-204ENST00000514421 KRT6CP48668 564 aa7.81□□□□□ -1.16
CCL28-204ENST00000514421 LIM2P55344 173 aa7.81□□□□□ -1.16
CCL28-204ENST00000514421 RAB38P57729 211 aa7.81□□□□□ -1.16
CCL28-204ENST00000514421 C21orf58P58505 322 aa7.81□□□□□ -1.16
CCL28-204ENST00000514421 RHAGQ02094 409 aa7.81□□□□□ -1.16
CCL28-204ENST00000514421 AIMP2Q13155 320 aaKnown RBP7.81□□□□□ -1.16
CCL28-204ENST00000514421 TRIM25Q14258 630 aaKnown RBP7.81□□□□□ -1.16
CCL28-204ENST00000514421 NSDHLQ15738 373 aa7.81□□□□□ -1.16
CCL28-204ENST00000514421 SGO1Q5FBB7 561 aa7.81□□□□□ -1.16
CCL28-204ENST00000514421 SAMD4BQ5PRF9 694 aaKnown RBP7.81□□□□□ -1.16
CCL28-204ENST00000514421 TCHHL1Q5QJ38 904 aaPredicted RBP7.81□□□□□ -1.16
CCL28-204ENST00000514421 CPZQ66K79 652 aa7.81□□□□□ -1.16
CCL28-204ENST00000514421 FAAH2Q6GMR7 532 aa7.81□□□□□ -1.16
CCL28-204ENST00000514421 ZFP1Q6P2D0 407 aa7.81□□□□□ -1.16
CCL28-204ENST00000514421 CPEB2Q7Z5Q1 589 aaKnown RBP7.81□□□□□ -1.16
CCL28-204ENST00000514421 FAM9CQ8IZT9 166 aa7.81□□□□□ -1.16
CCL28-204ENST00000514421 RNF175Q8N4F7 328 aa7.81□□□□□ -1.16
CCL28-204ENST00000514421 ACOT4Q8N9L9 421 aa7.81□□□□□ -1.16
CCL28-204ENST00000514421 GLB1L3Q8NCI6 653 aaPredicted RBP7.81□□□□□ -1.16
CCL28-204ENST00000514421 C7orf57Q8NEG2 295 aa7.81□□□□□ -1.16
CCL28-204ENST00000514421 C9orf43Q8TAL5 461 aaPredicted RBP7.81□□□□□ -1.16
CCL28-204ENST00000514421 ADAMTS18Q8TE60 1221 aa7.81□□□□□ -1.16
CCL28-204ENST00000514421 SELENOMQ8WWX9 145 aa7.81□□□□□ -1.16
CCL28-204ENST00000514421 C8orf44Q96CB5 159 aa7.81□□□□□ -1.16
CCL28-204ENST00000514421 SPDL1Q96EA4 605 aa7.81□□□□□ -1.16
CCL28-204ENST00000514421 C11orf24Q96F05 449 aaPredicted RBP7.81□□□□□ -1.16
CCL28-204ENST00000514421 TEX37Q96LM6 180 aa7.81□□□□□ -1.16
CCL28-204ENST00000514421 ZNF700Q9H0M5 742 aa7.81□□□□□ -1.16
CCL28-204ENST00000514421 DDX31Q9H8H2 851 aaKnown RBP7.81□□□□□ -1.16
CCL28-204ENST00000514421 LYRM4Q9HD34 91 aa7.81□□□□□ -1.16
CCL28-204ENST00000514421 GID8Q9NWU2 228 aa7.81□□□□□ -1.16
CCL28-204ENST00000514421 NMRK1Q9NWW6 199 aa7.81□□□□□ -1.16
CCL28-204ENST00000514421 MS4A12Q9NXJ0 267 aa7.81□□□□□ -1.16
CCL28-204ENST00000514421 KCMF1Q9P0J7 381 aa7.81□□□□□ -1.16
CCL28-204ENST00000514421 GIMAP2Q9UG22 337 aa7.81□□□□□ -1.16
CCL28-204ENST00000514421 DAPP1Q9UN19 280 aa7.81□□□□□ -1.16
CCL28-204ENST00000514421 MRPS33Q9Y291 106 aaKnown RBP7.81□□□□□ -1.16
CCL28-204ENST00000514421 TMED5Q9Y3A6 229 aa7.81□□□□□ -1.16
CCL28-204ENST00000514421 MMACHCQ9Y4U1 282 aa7.81□□□□□ -1.16
CCL28-204ENST00000514421 PCDHGA9Q9Y5G4 932 aaKnown RBP7.81□□□□□ -1.16
CCL28-204ENST00000514421 SPACA6W5XKT8 324 aa7.81□□□□□ -1.16
CCL28-204ENST00000514421 IGHV1-45A0A0A0MS14 117 aa7.8□□□□□ -1.16
CCL28-204ENST00000514421 NSG1A0A0A6YYJ2 146 aa7.8□□□□□ -1.16
CCL28-204ENST00000514421 BLACEA4D250 179 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms