RNA–Protein interactions for RNA: ENST00000514404.1

AC008560.1-202, humanhuman

APPRIS ALT2 TSL 4

Gene AC008560.1, Length 332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008560.1-202ENST00000514404 SSX3Q99909 188 aa1.28□□□□□ -2.2
AC008560.1-202ENST00000514404 ACAT2Q9BWD1 397 aa1.28□□□□□ -2.2
AC008560.1-202ENST00000514404 TEX13AQ9BXU3 409 aaPredicted RBP1.28□□□□□ -2.2
AC008560.1-202ENST00000514404 TRPV6Q9H1D0 765 aa1.28□□□□□ -2.2
AC008560.1-202ENST00000514404 GANQ9H2C0 597 aa1.28□□□□□ -2.2
AC008560.1-202ENST00000514404 TMEM245Q9H330 911 aa1.28□□□□□ -2.2
AC008560.1-202ENST00000514404 ZNF665Q9H7R5 613 aa1.28□□□□□ -2.2
AC008560.1-202ENST00000514404 DBNDD1Q9H9R9 158 aa1.28□□□□□ -2.2
AC008560.1-202ENST00000514404 PLEKHA3Q9HB20 300 aa1.28□□□□□ -2.2
AC008560.1-202ENST00000514404 NMUR1Q9HB89 426 aa1.28□□□□□ -2.2
AC008560.1-202ENST00000514404 RAB9BQ9NP90 201 aa1.28□□□□□ -2.2
AC008560.1-202ENST00000514404 TNFRSF19Q9NS68 423 aa1.28□□□□□ -2.2
AC008560.1-202ENST00000514404 HOMER3Q9NSC5 361 aa1.28□□□□□ -2.2
AC008560.1-202ENST00000514404 PNPLA3Q9NST1 481 aa1.28□□□□□ -2.2
AC008560.1-202ENST00000514404 ACOXLQ9NUZ1 547 aa1.28□□□□□ -2.2
AC008560.1-202ENST00000514404 MED17Q9NVC6 651 aa1.28□□□□□ -2.2
AC008560.1-202ENST00000514404 ERVK-18Q9QC07 812 aa1.28□□□□□ -2.2
AC008560.1-202ENST00000514404 PRO0461Q9UI25 63 aa1.28□□□□□ -2.2
AC008560.1-202ENST00000514404 NIP7Q9Y221 180 aaKnown RBP eCLIP1.28□□□□□ -2.2
AC008560.1-202ENST00000514404 EXOC6BQ9Y2D4 811 aa1.28□□□□□ -2.2
AC008560.1-202ENST00000514404 TDRKHQ9Y2W6 561 aaKnown RBP1.28□□□□□ -2.2
AC008560.1-202ENST00000514404 SH3GLB1Q9Y371 365 aa1.28□□□□□ -2.2
AC008560.1-202ENST00000514404 AUP1Q9Y679 476 aa1.28□□□□□ -2.2
AC008560.1-202ENST00000514404 SPAG9O60271 1321 aaKnown RBP1.28□□□□□ -2.2
AC008560.1-202ENST00000514404 ABCC9O60706 1549 aa1.28□□□□□ -2.2
AC008560.1-202ENST00000514404 CFAP65Q6ZU64 1925 aaKnown RBP1.27□□□□□ -2.21
AC008560.1-202ENST00000514404 A0A0A6YYC8 382 aaPredicted RBP1.27□□□□□ -2.21
AC008560.1-202ENST00000514404 A0A1B0GTH9 108 aa1.27□□□□□ -2.21
AC008560.1-202ENST00000514404 ATP6AP2A0A1C7CYW4 349 aa1.27□□□□□ -2.21
AC008560.1-202ENST00000514404 LOC390937A0A1W2PQ73 354 aa1.27□□□□□ -2.21
AC008560.1-202ENST00000514404 TRIM49BA6NDI0 452 aa1.27□□□□□ -2.21
AC008560.1-202ENST00000514404 IGLON5A6NGN9 336 aa1.27□□□□□ -2.21
AC008560.1-202ENST00000514404 SLC9B1P1A6NJY1 282 aa1.27□□□□□ -2.21
AC008560.1-202ENST00000514404 YJEFN3A6XGL0 299 aa1.27□□□□□ -2.21
AC008560.1-202ENST00000514404 ZNF724A8MTY0 619 aa1.27□□□□□ -2.21
AC008560.1-202ENST00000514404 E9PAM4 449 aa1.27□□□□□ -2.21
AC008560.1-202ENST00000514404 I3L1I5 382 aaPredicted RBP1.27□□□□□ -2.21
AC008560.1-202ENST00000514404 SLC28A1O00337 649 aa1.27□□□□□ -2.21
AC008560.1-202ENST00000514404 EEF2KO00418 725 aaKnown RBP1.27□□□□□ -2.21
AC008560.1-202ENST00000514404 FBP2O00757 339 aa1.27□□□□□ -2.21
AC008560.1-202ENST00000514404 SSX5O60225 188 aa1.27□□□□□ -2.21
AC008560.1-202ENST00000514404 KIAA0513O60268 411 aa1.27□□□□□ -2.21
AC008560.1-202ENST00000514404 NME2P1O60361 137 aa1.27□□□□□ -2.21
AC008560.1-202ENST00000514404 NME6O75414 186 aaPredicted RBP1.27□□□□□ -2.21
AC008560.1-202ENST00000514404 OR6A2O95222 327 aa1.27□□□□□ -2.21
AC008560.1-202ENST00000514404 CPNE6O95741 557 aa1.27□□□□□ -2.21
AC008560.1-202ENST00000514404 OLFM2O95897 454 aa1.27□□□□□ -2.21
AC008560.1-202ENST00000514404 PDGFBP01127 241 aaPredicted RBP1.27□□□□□ -2.21
AC008560.1-202ENST00000514404 THY1P04216 161 aa1.27□□□□□ -2.21
AC008560.1-202ENST00000514404 GSTA1P08263 222 aa1.27□□□□□ -2.21
AC008560.1-202ENST00000514404 HIST1H2AGP0C0S8 130 aaPredicted RBP1.27□□□□□ -2.21
AC008560.1-202ENST00000514404 CCDC192P0DO97 292 aa1.27□□□□□ -2.21
AC008560.1-202ENST00000514404 MBL2P11226 248 aaPredicted RBP1.27□□□□□ -2.21
AC008560.1-202ENST00000514404 ODC1P11926 461 aa1.27□□□□□ -2.21
AC008560.1-202ENST00000514404 EZRP15311 586 aaKnown RBP1.27□□□□□ -2.21
AC008560.1-202ENST00000514404 AREGP15514 252 aa1.27□□□□□ -2.21
AC008560.1-202ENST00000514404 KLK2P20151 261 aa1.27□□□□□ -2.21
AC008560.1-202ENST00000514404 SLC1A6P48664 564 aa1.27□□□□□ -2.21
AC008560.1-202ENST00000514404 RPL34P49207 117 aaKnown RBP1.27□□□□□ -2.21
AC008560.1-202ENST00000514404 FHITP49789 147 aa1.27□□□□□ -2.21
AC008560.1-202ENST00000514404 SMSP52788 366 aa1.27□□□□□ -2.21
AC008560.1-202ENST00000514404 UCP2P55851 309 aa1.27□□□□□ -2.21
AC008560.1-202ENST00000514404 PPIAP62937 165 aaKnown RBP1.27□□□□□ -2.21
AC008560.1-202ENST00000514404 GSTO1P78417 241 aa1.27□□□□□ -2.21
AC008560.1-202ENST00000514404 GALK2Q01415 458 aa1.27□□□□□ -2.21
AC008560.1-202ENST00000514404 GFPT1Q06210 699 aaPredicted RBP1.27□□□□□ -2.21
AC008560.1-202ENST00000514404 MFGE8Q08431 387 aaPredicted RBP1.27□□□□□ -2.21
AC008560.1-202ENST00000514404 HSPA14Q0VDF9 509 aa1.27□□□□□ -2.21
AC008560.1-202ENST00000514404 AP1B1Q10567 949 aa1.27□□□□□ -2.21
AC008560.1-202ENST00000514404 PPP2R5CQ13362 524 aa1.27□□□□□ -2.21
AC008560.1-202ENST00000514404 MEF2DQ14814 521 aa1.27□□□□□ -2.21
AC008560.1-202ENST00000514404 HEPACAMQ14CZ8 416 aa1.27□□□□□ -2.21
AC008560.1-202ENST00000514404 CARTPTQ16568 116 aa1.27□□□□□ -2.21
AC008560.1-202ENST00000514404 ECSCRQ19T08 205 aa1.27□□□□□ -2.21
AC008560.1-202ENST00000514404 SHROOM1Q2M3G4 852 aaPredicted RBP1.27□□□□□ -2.21
AC008560.1-202ENST00000514404 MPPE1Q53F39 396 aa1.27□□□□□ -2.21
AC008560.1-202ENST00000514404 NHLRC3Q5JS37 347 aa1.27□□□□□ -2.21
AC008560.1-202ENST00000514404 ATAD3CQ5T2N8 411 aa1.27□□□□□ -2.21
AC008560.1-202ENST00000514404 LIPJQ5W064 366 aa1.27□□□□□ -2.21
AC008560.1-202ENST00000514404 OLFML2AQ68BL7 652 aa1.27□□□□□ -2.21
AC008560.1-202ENST00000514404 RTL6Q6ICC9 239 aa1.27□□□□□ -2.21
AC008560.1-202ENST00000514404 CAPN13Q6MZZ7 669 aaPredicted RBP1.27□□□□□ -2.21
AC008560.1-202ENST00000514404 NEPROQ6NW34 567 aa1.27□□□□□ -2.21
AC008560.1-202ENST00000514404 CWC27Q6UX04 472 aaKnown RBP1.27□□□□□ -2.21
AC008560.1-202ENST00000514404 OLFM4Q6UX06 510 aa1.27□□□□□ -2.21
AC008560.1-202ENST00000514404 NUFIP2Q7Z417 695 aaKnown RBP1.27□□□□□ -2.21
AC008560.1-202ENST00000514404 ZNF410Q86VK4 478 aa1.27□□□□□ -2.21
AC008560.1-202ENST00000514404 CACUL1Q86Y37 369 aa1.27□□□□□ -2.21
AC008560.1-202ENST00000514404 HIPK1Q86Z02 1210 aa1.27□□□□□ -2.21
AC008560.1-202ENST00000514404 HIST2H2ABQ8IUE6 130 aaPredicted RBP1.27□□□□□ -2.21
AC008560.1-202ENST00000514404 PEX5LQ8IYB4 626 aa1.27□□□□□ -2.21
AC008560.1-202ENST00000514404 BATF2Q8N1L9 274 aa1.27□□□□□ -2.21
AC008560.1-202ENST00000514404 ARL10Q8N8L6 244 aa1.27□□□□□ -2.21
AC008560.1-202ENST00000514404 CLEC1AQ8NC01 280 aa1.27□□□□□ -2.21
AC008560.1-202ENST00000514404 CCDC197Q8NCU1 140 aa1.27□□□□□ -2.21
AC008560.1-202ENST00000514404 TRPV3Q8NET8 790 aa1.27□□□□□ -2.21
AC008560.1-202ENST00000514404 OR6M1Q8NGM8 313 aa1.27□□□□□ -2.21
AC008560.1-202ENST00000514404 PCNPQ8WW12 178 aaKnown RBP1.27□□□□□ -2.21
AC008560.1-202ENST00000514404 HIST1H2ACQ93077 130 aa1.27□□□□□ -2.21
AC008560.1-202ENST00000514404 CDHR1Q96JP9 859 aa1.27□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms