RNA–Protein interactions for RNA: ENST00000513989.5

NEDD9-214, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 4

Gene NEDD9, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-214ENST00000513989 SAR1AQ9NR31 198 aa9.53□□□□□ -0.88
NEDD9-214ENST00000513989 LANCL2Q9NS86 450 aa9.53□□□□□ -0.88
NEDD9-214ENST00000513989 CCDC167Q9P0B6 97 aa9.53□□□□□ -0.88
NEDD9-214ENST00000513989 CES1P1Q9UKY3 287 aa9.53□□□□□ -0.88
NEDD9-214ENST00000513989 TCFL5Q9UL49 500 aa9.53□□□□□ -0.88
NEDD9-214ENST00000513989 CLCA3PQ9Y6N3 262 aa9.53□□□□□ -0.88
NEDD9-214ENST00000513989 CAPN7Q9Y6W3 813 aa9.53□□□□□ -0.88
NEDD9-214ENST00000513989 DOPEY2Q9Y3R5 2298 aa9.52□□□□□ -0.89
NEDD9-214ENST00000513989 LOC101059948A0A1B0GTJ6 334 aa9.52□□□□□ -0.89
NEDD9-214ENST00000513989 PRSS51A0A1B0GVH4 220 aa9.52□□□□□ -0.89
NEDD9-214ENST00000513989 A0A1W2PRB8 838 aa9.52□□□□□ -0.89
NEDD9-214ENST00000513989 CCDC154A6NI56 674 aa9.52□□□□□ -0.89
NEDD9-214ENST00000513989 K7ENP7 123 aa9.52□□□□□ -0.89
NEDD9-214ENST00000513989 PEX12O00623 359 aa9.52□□□□□ -0.89
NEDD9-214ENST00000513989 ANKRD28O15084 1053 aa9.52□□□□□ -0.89
NEDD9-214ENST00000513989 PDPK1O15530 556 aa9.52□□□□□ -0.89
NEDD9-214ENST00000513989 LDB3O75112 727 aa9.52□□□□□ -0.89
NEDD9-214ENST00000513989 JRKO75564 520 aa9.52□□□□□ -0.89
NEDD9-214ENST00000513989 KLF7O75840 302 aaPredicted RBP9.52□□□□□ -0.89
NEDD9-214ENST00000513989 SLITRK5O94991 958 aa9.52□□□□□ -0.89
NEDD9-214ENST00000513989 PGRP06401 933 aa9.52□□□□□ -0.89
NEDD9-214ENST00000513989 SNRPB2P08579 225 aaKnown RBP9.52□□□□□ -0.89
NEDD9-214ENST00000513989 ICAM2P13598 275 aa9.52□□□□□ -0.89
NEDD9-214ENST00000513989 MAOAP21397 527 aa9.52□□□□□ -0.89
NEDD9-214ENST00000513989 MMP11P24347 488 aa9.52□□□□□ -0.89
NEDD9-214ENST00000513989 GALNSP34059 522 aa9.52□□□□□ -0.89
NEDD9-214ENST00000513989 MNAT1P51948 309 aa9.52□□□□□ -0.89
NEDD9-214ENST00000513989 UCNP55089 124 aa9.52□□□□□ -0.89
NEDD9-214ENST00000513989 OR4D2P58180 307 aa9.52□□□□□ -0.89
NEDD9-214ENST00000513989 BTG2P78543 158 aa9.52□□□□□ -0.89
NEDD9-214ENST00000513989 PLIN5Q00G26 463 aa9.52□□□□□ -0.89
NEDD9-214ENST00000513989 RHAGQ02094 409 aa9.52□□□□□ -0.89
NEDD9-214ENST00000513989 FOLH1Q04609 750 aa9.52□□□□□ -0.89
NEDD9-214ENST00000513989 VAC14Q08AM6 782 aa9.52□□□□□ -0.89
NEDD9-214ENST00000513989 STX5Q13190 355 aa9.52□□□□□ -0.89
NEDD9-214ENST00000513989 SRSF6Q13247 344 aaKnown RBP9.52□□□□□ -0.89
NEDD9-214ENST00000513989 PDE7AQ13946 482 aa9.52□□□□□ -0.89
NEDD9-214ENST00000513989 MAPKAPK3Q16644 382 aa9.52□□□□□ -0.89
NEDD9-214ENST00000513989 FAM174BQ3ZCQ3 159 aa9.52□□□□□ -0.89
NEDD9-214ENST00000513989 INO80CQ6PI98 192 aaPredicted RBP9.52□□□□□ -0.89
NEDD9-214ENST00000513989 SHISA6Q6ZSJ9 500 aa9.52□□□□□ -0.89
NEDD9-214ENST00000513989 MSANTD1Q6ZTZ1 278 aa9.52□□□□□ -0.89
NEDD9-214ENST00000513989 CAMKMTQ7Z624 323 aa9.52□□□□□ -0.89
NEDD9-214ENST00000513989 RAB43Q86YS6 212 aa9.52□□□□□ -0.89
NEDD9-214ENST00000513989 OR4N5Q8IXE1 308 aa9.52□□□□□ -0.89
NEDD9-214ENST00000513989 ST13P4Q8IZP2 240 aaPredicted RBP9.52□□□□□ -0.89
NEDD9-214ENST00000513989 LRRC25Q8N386 305 aaPredicted RBP9.52□□□□□ -0.89
NEDD9-214ENST00000513989 OR7A2PQ8NGA2 310 aa9.52□□□□□ -0.89
NEDD9-214ENST00000513989 DAZLQ92904 295 aaKnown RBP9.52□□□□□ -0.89
NEDD9-214ENST00000513989 RIT1Q92963 219 aa9.52□□□□□ -0.89
NEDD9-214ENST00000513989 ANKRD9Q96BM1 317 aaPredicted RBP9.52□□□□□ -0.89
NEDD9-214ENST00000513989 WBP1Q96G27 269 aa9.52□□□□□ -0.89
NEDD9-214ENST00000513989 SPSB2Q99619 263 aa9.52□□□□□ -0.89
NEDD9-214ENST00000513989 RBCK1Q9BYM8 510 aa9.52□□□□□ -0.89
NEDD9-214ENST00000513989 NMUR2Q9GZQ4 415 aa9.52□□□□□ -0.89
NEDD9-214ENST00000513989 ACTL8Q9H568 366 aa9.52□□□□□ -0.89
NEDD9-214ENST00000513989 ACSS1Q9NUB1 689 aaPredicted RBP9.52□□□□□ -0.89
NEDD9-214ENST00000513989 MYO1GB0I1T2 1018 aa9.51□□□□□ -0.89
NEDD9-214ENST00000513989 RNASET2O00584 256 aaKnown RBP9.51□□□□□ -0.89
NEDD9-214ENST00000513989 ANGPT2O15123 496 aa9.51□□□□□ -0.89
NEDD9-214ENST00000513989 PRKRAO75569 313 aaKnown RBP9.51□□□□□ -0.89
NEDD9-214ENST00000513989 CREG1O75629 220 aa9.51□□□□□ -0.89
NEDD9-214ENST00000513989 BCAS2O75934 225 aaPredicted RBP9.51□□□□□ -0.89
NEDD9-214ENST00000513989 LAMP1P11279 417 aa9.51□□□□□ -0.89
NEDD9-214ENST00000513989 CPMP14384 443 aa9.51□□□□□ -0.89
NEDD9-214ENST00000513989 NT5EP21589 574 aa9.51□□□□□ -0.89
NEDD9-214ENST00000513989 GPC1P35052 558 aa9.51□□□□□ -0.89
NEDD9-214ENST00000513989 FEN1P39748 380 aaKnown RBP9.51□□□□□ -0.89
NEDD9-214ENST00000513989 STT3AP46977 705 aa9.51□□□□□ -0.89
NEDD9-214ENST00000513989 NCBP2P52298 156 aaKnown RBP eCLIP9.51□□□□□ -0.89
NEDD9-214ENST00000513989 AP2B1P63010 937 aa9.51□□□□□ -0.89
NEDD9-214ENST00000513989 KLF10Q13118 480 aa9.51□□□□□ -0.89
NEDD9-214ENST00000513989 CYLC2Q14093 348 aaPredicted RBP9.51□□□□□ -0.89
NEDD9-214ENST00000513989 MLC1Q15049 377 aa9.51□□□□□ -0.89
NEDD9-214ENST00000513989 TGIF1Q15583 401 aa9.51□□□□□ -0.89
NEDD9-214ENST00000513989 UGT8Q16880 541 aa9.51□□□□□ -0.89
NEDD9-214ENST00000513989 MMEL1Q495T6 779 aa9.51□□□□□ -0.89
NEDD9-214ENST00000513989 BROXQ5VW32 411 aa9.51□□□□□ -0.89
NEDD9-214ENST00000513989 ANKRD26P1Q6NSI1 321 aa9.51□□□□□ -0.89
NEDD9-214ENST00000513989 BHLHB9Q6PI77 547 aa9.51□□□□□ -0.89
NEDD9-214ENST00000513989 BLOC1S3Q6QNY0 202 aa9.51□□□□□ -0.89
NEDD9-214ENST00000513989 CPEB2Q7Z5Q1 589 aaKnown RBP9.51□□□□□ -0.89
NEDD9-214ENST00000513989 ZNF605Q86T29 641 aa9.51□□□□□ -0.89
NEDD9-214ENST00000513989 TMEM151BQ8IW70 566 aa9.51□□□□□ -0.89
NEDD9-214ENST00000513989 SCUBE1Q8IWY4 988 aa9.51□□□□□ -0.89
NEDD9-214ENST00000513989 CCDC116Q8IYX3 515 aa9.51□□□□□ -0.89
NEDD9-214ENST00000513989 MMP21Q8N119 569 aa9.51□□□□□ -0.89
NEDD9-214ENST00000513989 TRIML2Q8N7C3 387 aa9.51□□□□□ -0.89
NEDD9-214ENST00000513989 DNAJB8Q8NHS0 232 aa9.51□□□□□ -0.89
NEDD9-214ENST00000513989 OR5P2Q8WZ92 322 aa9.51□□□□□ -0.89
NEDD9-214ENST00000513989 ERP27Q96DN0 273 aa9.51□□□□□ -0.89
NEDD9-214ENST00000513989 SPDL1Q96EA4 605 aa9.51□□□□□ -0.89
NEDD9-214ENST00000513989 ITCHQ96J02 903 aa9.51□□□□□ -0.89
NEDD9-214ENST00000513989 ART5Q96L15 291 aa9.51□□□□□ -0.89
NEDD9-214ENST00000513989 LPAR4Q99677 370 aa9.51□□□□□ -0.89
NEDD9-214ENST00000513989 SLC25A23Q9BV35 468 aa9.51□□□□□ -0.89
NEDD9-214ENST00000513989 ADAP2Q9NPF8 381 aa9.51□□□□□ -0.89
NEDD9-214ENST00000513989 PNO1Q9NRX1 252 aaKnown RBP9.51□□□□□ -0.89
NEDD9-214ENST00000513989 FAM120CQ9NX05 1096 aaKnown RBP9.51□□□□□ -0.89
NEDD9-214ENST00000513989 NDUFAF1Q9Y375 327 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms