RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 SLC38A5Q8WUX1 472 aa7.89□□□□□ -1.15
RNF4-220ENST00000513578 GEMIN6Q8WXD5 167 aaKnown RBP7.89□□□□□ -1.15
RNF4-220ENST00000513578 TANKQ92844 425 aa7.89□□□□□ -1.15
RNF4-220ENST00000513578 MAL2Q969L2 176 aa7.89□□□□□ -1.15
RNF4-220ENST00000513578 ELP4Q96EB1 424 aa7.89□□□□□ -1.15
RNF4-220ENST00000513578 SLC35G5Q96KT7 338 aa7.89□□□□□ -1.15
RNF4-220ENST00000513578 CNBD2Q96M20 576 aa7.89□□□□□ -1.15
RNF4-220ENST00000513578 FCRL4Q96PJ5 515 aa7.89□□□□□ -1.15
RNF4-220ENST00000513578 SLC38A3Q99624 504 aa7.89□□□□□ -1.15
RNF4-220ENST00000513578 PSD2Q9BQI7 771 aa7.89□□□□□ -1.15
RNF4-220ENST00000513578 MIR1-1HGQ9H1L0 117 aa7.89□□□□□ -1.15
RNF4-220ENST00000513578 SERHL2Q9H4I8 314 aa7.89□□□□□ -1.15
RNF4-220ENST00000513578 CAAP1Q9H8G2 361 aa7.89□□□□□ -1.15
RNF4-220ENST00000513578 SEMA5BQ9P283 1151 aa7.89□□□□□ -1.15
RNF4-220ENST00000513578 C5AR2Q9P296 337 aa7.89□□□□□ -1.15
RNF4-220ENST00000513578 THEGQ9P2T0 379 aa7.89□□□□□ -1.15
RNF4-220ENST00000513578 P2RX2Q9UBL9 471 aa7.89□□□□□ -1.15
RNF4-220ENST00000513578 PCDHGB3Q9Y5G1 929 aa7.89□□□□□ -1.15
RNF4-220ENST00000513578 SNX11Q9Y5W9 270 aa7.89□□□□□ -1.15
RNF4-220ENST00000513578 SNX8Q9Y5X2 465 aa7.89□□□□□ -1.15
RNF4-220ENST00000513578 CACNA1EQ15878 2313 aa7.89□□□□□ -1.15
RNF4-220ENST00000513578 NINQ8N4C6 2090 aa7.88□□□□□ -1.15
RNF4-220ENST00000513578 A0A087WV62 115 aa7.88□□□□□ -1.15
RNF4-220ENST00000513578 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.88□□□□□ -1.15
RNF4-220ENST00000513578 A0A0G2JPF8 293 aa7.88□□□□□ -1.15
RNF4-220ENST00000513578 A0A1B0GTW7 788 aa7.88□□□□□ -1.15
RNF4-220ENST00000513578 TMEM247A6NEH6 219 aa7.88□□□□□ -1.15
RNF4-220ENST00000513578 TLCD2A6NGC4 264 aa7.88□□□□□ -1.15
RNF4-220ENST00000513578 TRIM64CA6NLI5 447 aa7.88□□□□□ -1.15
RNF4-220ENST00000513578 DUXAA6NLW8 204 aa7.88□□□□□ -1.15
RNF4-220ENST00000513578 HNRNPCL2B2RXH8 293 aa7.88□□□□□ -1.15
RNF4-220ENST00000513578 HNRNPCL3B7ZW38 293 aa7.88□□□□□ -1.15
RNF4-220ENST00000513578 C5orf58C9J3I9 102 aa7.88□□□□□ -1.15
RNF4-220ENST00000513578 E9PQ18 207 aa7.88□□□□□ -1.15
RNF4-220ENST00000513578 H3BNH8 94 aa7.88□□□□□ -1.15
RNF4-220ENST00000513578 STK25O00506 426 aa7.88□□□□□ -1.15
RNF4-220ENST00000513578 CYR61O00622 381 aa7.88□□□□□ -1.15
RNF4-220ENST00000513578 ADAMDEC1O15204 470 aa7.88□□□□□ -1.15
RNF4-220ENST00000513578 SLC16A6O15403 523 aa7.88□□□□□ -1.15
RNF4-220ENST00000513578 NUDT21O43809 227 aaKnown RBP7.88□□□□□ -1.15
RNF4-220ENST00000513578 SH3BP5O60239 455 aa7.88□□□□□ -1.15
RNF4-220ENST00000513578 ERAL1O75616 437 aaKnown RBP7.88□□□□□ -1.15
RNF4-220ENST00000513578 SERPINB7O75635 380 aa7.88□□□□□ -1.15
RNF4-220ENST00000513578 DNAJB5O75953 348 aa7.88□□□□□ -1.15
RNF4-220ENST00000513578 SOX30O94993 753 aa7.88□□□□□ -1.15
RNF4-220ENST00000513578 MFN2O95140 757 aa7.88□□□□□ -1.15
RNF4-220ENST00000513578 PGM3O95394 542 aa7.88□□□□□ -1.15
RNF4-220ENST00000513578 AGR2O95994 175 aa7.88□□□□□ -1.15
RNF4-220ENST00000513578 C9P02748 559 aa7.88□□□□□ -1.15
RNF4-220ENST00000513578 ALBP02768 609 aa7.88□□□□□ -1.15
RNF4-220ENST00000513578 STATHP02808 62 aa7.88□□□□□ -1.15
RNF4-220ENST00000513578 DCNP07585 359 aaKnown RBP7.88□□□□□ -1.15
RNF4-220ENST00000513578 HNRNPCL4P0DMR1 293 aa7.88□□□□□ -1.15
RNF4-220ENST00000513578 ITGAMP11215 1152 aa7.88□□□□□ -1.15
RNF4-220ENST00000513578 ETS2P15036 469 aa7.88□□□□□ -1.15
RNF4-220ENST00000513578 TYRP1P17643 537 aa7.88□□□□□ -1.15
RNF4-220ENST00000513578 CD247P20963 164 aa7.88□□□□□ -1.15
RNF4-220ENST00000513578 MATN1P21941 496 aa7.88□□□□□ -1.15
RNF4-220ENST00000513578 CDH3P22223 829 aa7.88□□□□□ -1.15
RNF4-220ENST00000513578 GPR3P46089 330 aa7.88□□□□□ -1.15
RNF4-220ENST00000513578 MAN2A2P49641 1150 aa7.88□□□□□ -1.15
RNF4-220ENST00000513578 MAPK10P53779 464 aa7.88□□□□□ -1.15
RNF4-220ENST00000513578 RAD23AP54725 363 aa7.88□□□□□ -1.15
RNF4-220ENST00000513578 RAB38P57729 211 aa7.88□□□□□ -1.15
RNF4-220ENST00000513578 KCNC4Q03721 635 aa7.88□□□□□ -1.15
RNF4-220ENST00000513578 DUSP2Q05923 314 aa7.88□□□□□ -1.15
RNF4-220ENST00000513578 APOFQ13790 326 aa7.88□□□□□ -1.15
RNF4-220ENST00000513578 FAM53BQ14153 422 aa7.88□□□□□ -1.15
RNF4-220ENST00000513578 NDUFA9Q16795 377 aa7.88□□□□□ -1.15
RNF4-220ENST00000513578 KCTD21Q4G0X4 260 aa7.88□□□□□ -1.15
RNF4-220ENST00000513578 DEFB134Q4QY38 66 aa7.88□□□□□ -1.15
RNF4-220ENST00000513578 TCTE1Q5JU00 501 aa7.88□□□□□ -1.15
RNF4-220ENST00000513578 EXOSC6Q5RKV6 272 aaKnown RBP7.88□□□□□ -1.15
RNF4-220ENST00000513578 C6orf132Q5T0Z8 1188 aa7.88□□□□□ -1.15
RNF4-220ENST00000513578 AP1ARQ63HQ0 302 aa7.88□□□□□ -1.15
RNF4-220ENST00000513578 CWF19L1Q69YN2 538 aaKnown RBP7.88□□□□□ -1.15
RNF4-220ENST00000513578 ZCCHC12Q6PEW1 402 aa7.88□□□□□ -1.15
RNF4-220ENST00000513578 VTCN1Q7Z7D3 282 aa7.88□□□□□ -1.15
RNF4-220ENST00000513578 TMEM179BQ7Z7N9 219 aa7.88□□□□□ -1.15
RNF4-220ENST00000513578 MCATQ8IVS2 390 aaKnown RBP7.88□□□□□ -1.15
RNF4-220ENST00000513578 TMEFF1Q8IYR6 380 aa7.88□□□□□ -1.15
RNF4-220ENST00000513578 CCDC116Q8IYX3 515 aa7.88□□□□□ -1.15
RNF4-220ENST00000513578 CA13Q8N1Q1 262 aa7.88□□□□□ -1.15
RNF4-220ENST00000513578 LRRC25Q8N386 305 aaPredicted RBP7.88□□□□□ -1.15
RNF4-220ENST00000513578 ARL10Q8N8L6 244 aa7.88□□□□□ -1.15
RNF4-220ENST00000513578 BBS10Q8TAM1 723 aa7.88□□□□□ -1.15
RNF4-220ENST00000513578 ZNF675Q8TD23 568 aa7.88□□□□□ -1.15
RNF4-220ENST00000513578 APOBEC4Q8WW27 367 aaKnown RBP7.88□□□□□ -1.15
RNF4-220ENST00000513578 TMEM19Q96HH6 336 aa7.88□□□□□ -1.15
RNF4-220ENST00000513578 ZNF300Q96RE9 604 aaPredicted RBP7.88□□□□□ -1.15
RNF4-220ENST00000513578 ZNF607Q96SK3 696 aa7.88□□□□□ -1.15
RNF4-220ENST00000513578 SPATA5L1Q9BVQ7 753 aa7.88□□□□□ -1.15
RNF4-220ENST00000513578 BTBD2Q9BX70 525 aa7.88□□□□□ -1.15
RNF4-220ENST00000513578 MRPS26Q9BYN8 205 aaKnown RBP7.88□□□□□ -1.15
RNF4-220ENST00000513578 OR51I1Q9H343 314 aa7.88□□□□□ -1.15
RNF4-220ENST00000513578 REEP1Q9H902 201 aa7.88□□□□□ -1.15
RNF4-220ENST00000513578 FAM60AQ9NP50 221 aa7.88□□□□□ -1.15
RNF4-220ENST00000513578 ZCCHC3Q9NUD5 404 aaKnown RBP7.88□□□□□ -1.15
RNF4-220ENST00000513578 TUBA8Q9NY65 449 aaPredicted RBP7.88□□□□□ -1.15
RNF4-220ENST00000513578 CALML5Q9NZT1 146 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms