RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 LPAR4Q99677 370 aa3.75□□□□□ -1.81
HTT-210ENST00000512909 CCDC3Q9BQI4 270 aa3.75□□□□□ -1.81
HTT-210ENST00000512909 FAM213AQ9BRX8 229 aa3.75□□□□□ -1.81
HTT-210ENST00000512909 FUCA2Q9BTY2 467 aa3.75□□□□□ -1.81
HTT-210ENST00000512909 MLPHQ9BV36 600 aaPredicted RBP3.75□□□□□ -1.81
HTT-210ENST00000512909 TIPINQ9BVW5 301 aa3.75□□□□□ -1.81
HTT-210ENST00000512909 DGCR6LQ9BY27 220 aa3.75□□□□□ -1.81
HTT-210ENST00000512909 NFKBIZQ9BYH8 718 aa3.75□□□□□ -1.81
HTT-210ENST00000512909 ZBP1Q9H171 429 aa3.75□□□□□ -1.81
HTT-210ENST00000512909 Q9H8V8 135 aa3.75□□□□□ -1.81
HTT-210ENST00000512909 PARVGQ9HBI0 331 aa3.75□□□□□ -1.81
HTT-210ENST00000512909 SEPT10Q9P0V9 454 aa3.75□□□□□ -1.81
HTT-210ENST00000512909 IL36AQ9UHA7 158 aa3.75□□□□□ -1.81
HTT-210ENST00000512909 EXOC7Q9UPT5 735 aa3.75□□□□□ -1.81
HTT-210ENST00000512909 MRPS28Q9Y2Q9 187 aaKnown RBP3.75□□□□□ -1.81
HTT-210ENST00000512909 LRP12Q9Y561 859 aa3.75□□□□□ -1.81
HTT-210ENST00000512909 ZFP37Q9Y6Q3 630 aaPredicted RBP3.75□□□□□ -1.81
HTT-210ENST00000512909 SF3B1O75533 1304 aaKnown RBP eCLIP3.74□□□□□ -1.81
HTT-210ENST00000512909 PHLPP2Q6ZVD8 1323 aa3.74□□□□□ -1.81
HTT-210ENST00000512909 A0A0U1RQK1 487 aa3.74□□□□□ -1.81
HTT-210ENST00000512909 ZNF320A2RRD8 509 aa3.74□□□□□ -1.81
HTT-210ENST00000512909 E5RGE8 158 aa3.74□□□□□ -1.81
HTT-210ENST00000512909 PI4K2BG5E9Z4 385 aa3.74□□□□□ -1.81
HTT-210ENST00000512909 OGTO15294 1046 aa3.74□□□□□ -1.81
HTT-210ENST00000512909 POLR2DO15514 142 aaKnown RBP3.74□□□□□ -1.81
HTT-210ENST00000512909 FCGR3BO75015 233 aa3.74□□□□□ -1.81
HTT-210ENST00000512909 NXPH2O95156 264 aa3.74□□□□□ -1.81
HTT-210ENST00000512909 SIX3O95343 332 aaPredicted RBP3.74□□□□□ -1.81
HTT-210ENST00000512909 CLTAP09496 248 aa3.74□□□□□ -1.81
HTT-210ENST00000512909 FRMD6-AS1P0C7T7 363 aa3.74□□□□□ -1.81
HTT-210ENST00000512909 C8orf89P0DMQ9 161 aa3.74□□□□□ -1.81
HTT-210ENST00000512909 CXCL8P10145 99 aa3.74□□□□□ -1.81
HTT-210ENST00000512909 ERVK-10P10266 1014 aa3.74□□□□□ -1.81
HTT-210ENST00000512909 GAP43P17677 238 aa3.74□□□□□ -1.81
HTT-210ENST00000512909 ELAVL4P26378 380 aaKnown RBP3.74□□□□□ -1.81
HTT-210ENST00000512909 PIK3R1P27986 724 aa3.74□□□□□ -1.81
HTT-210ENST00000512909 TNFSF9P41273 254 aa3.74□□□□□ -1.81
HTT-210ENST00000512909 TSFMP43897 325 aaKnown RBP3.74□□□□□ -1.81
HTT-210ENST00000512909 CLCN4P51793 760 aa3.74□□□□□ -1.81
HTT-210ENST00000512909 SLC12A3P55017 1021 aa3.74□□□□□ -1.81
HTT-210ENST00000512909 ASIC1P78348 528 aa3.74□□□□□ -1.81
HTT-210ENST00000512909 NTHL1P78549 312 aa3.74□□□□□ -1.81
HTT-210ENST00000512909 TFAMQ00059 246 aaKnown RBP3.74□□□□□ -1.81
HTT-210ENST00000512909 GCNT1Q02742 428 aa3.74□□□□□ -1.81
HTT-210ENST00000512909 ABRQ12979 859 aa3.74□□□□□ -1.81
HTT-210ENST00000512909 ITGA9Q13797 1035 aa3.74□□□□□ -1.81
HTT-210ENST00000512909 RCN2Q14257 317 aa3.74□□□□□ -1.81
HTT-210ENST00000512909 P2RY6Q15077 328 aa3.74□□□□□ -1.81
HTT-210ENST00000512909 PTPN14Q15678 1187 aa3.74□□□□□ -1.81
HTT-210ENST00000512909 KYAT1Q16773 422 aa3.74□□□□□ -1.81
HTT-210ENST00000512909 SMU1Q2TAY7 513 aa3.74□□□□□ -1.81
HTT-210ENST00000512909 TXNRD3NBQ6F5E7 133 aa3.74□□□□□ -1.81
HTT-210ENST00000512909 UGT3A1Q6NUS8 523 aa3.74□□□□□ -1.81
HTT-210ENST00000512909 CYB5D1Q6P9G0 228 aa3.74□□□□□ -1.81
HTT-210ENST00000512909 STXBP4Q6ZWJ1 553 aa3.74□□□□□ -1.81
HTT-210ENST00000512909 GET4Q7L5D6 327 aaPredicted RBP3.74□□□□□ -1.81
HTT-210ENST00000512909 ZNF720Q7Z2F6 126 aa3.74□□□□□ -1.81
HTT-210ENST00000512909 PIGWQ7Z7B1 504 aa3.74□□□□□ -1.81
HTT-210ENST00000512909 ANKRD46Q86W74 232 aa3.74□□□□□ -1.81
HTT-210ENST00000512909 UNC45BQ8IWX7 931 aa3.74□□□□□ -1.81
HTT-210ENST00000512909 NELFCDQ8IXH7 590 aa3.74□□□□□ -1.81
HTT-210ENST00000512909 RCOR2Q8IZ40 523 aa3.74□□□□□ -1.81
HTT-210ENST00000512909 DAW1Q8N136 415 aa3.74□□□□□ -1.81
HTT-210ENST00000512909 THEM5Q8N1Q8 247 aa3.74□□□□□ -1.81
HTT-210ENST00000512909 CSGALNACT2Q8N6G5 542 aa3.74□□□□□ -1.81
HTT-210ENST00000512909 KIAA0895Q8NCT3 520 aa3.74□□□□□ -1.81
HTT-210ENST00000512909 TMEM161BQ8NDZ6 487 aa3.74□□□□□ -1.81
HTT-210ENST00000512909 MAPK15Q8TD08 544 aa3.74□□□□□ -1.81
HTT-210ENST00000512909 RSPH1Q8WYR4 309 aa3.74□□□□□ -1.81
HTT-210ENST00000512909 MR1Q95460 341 aa3.74□□□□□ -1.81
HTT-210ENST00000512909 SNX21Q969T3 373 aa3.74□□□□□ -1.81
HTT-210ENST00000512909 CCDC47Q96A33 483 aaKnown RBP3.74□□□□□ -1.81
HTT-210ENST00000512909 FAM122AQ96E09 287 aa3.74□□□□□ -1.81
HTT-210ENST00000512909 LRR1Q96L50 414 aa3.74□□□□□ -1.81
HTT-210ENST00000512909 NECTIN4Q96NY8 510 aa3.74□□□□□ -1.81
HTT-210ENST00000512909 HNRNPABQ99729 332 aaKnown RBP3.74□□□□□ -1.81
HTT-210ENST00000512909 CCSER1Q9C0I3 900 aa3.74□□□□□ -1.81
HTT-210ENST00000512909 WDR13Q9H1Z4 485 aa3.74□□□□□ -1.81
HTT-210ENST00000512909 BLZF1Q9H2G9 400 aa3.74□□□□□ -1.81
HTT-210ENST00000512909 DPEP2Q9H4A9 486 aa3.74□□□□□ -1.81
HTT-210ENST00000512909 POMKQ9H5K3 350 aa3.74□□□□□ -1.81
HTT-210ENST00000512909 SDF2L1Q9HCN8 221 aa3.74□□□□□ -1.81
HTT-210ENST00000512909 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.74□□□□□ -1.81
HTT-210ENST00000512909 EXOC1Q9NV70 894 aa3.74□□□□□ -1.81
HTT-210ENST00000512909 LEF1Q9UJU2 399 aaPredicted RBP3.74□□□□□ -1.81
HTT-210ENST00000512909 FBXL5Q9UKA1 691 aa3.74□□□□□ -1.81
HTT-210ENST00000512909 ODF2LQ9ULJ1 636 aa3.74□□□□□ -1.81
HTT-210ENST00000512909 NSG2Q9Y328 171 aa3.74□□□□□ -1.81
HTT-210ENST00000512909 HTTP42858 3142 aa3.73□□□□□ -1.81
HTT-210ENST00000512909 TRAV18A0A075B6X5 111 aa3.73□□□□□ -1.81
HTT-210ENST00000512909 A0A087WW49 117 aa3.73□□□□□ -1.81
HTT-210ENST00000512909 A0A1B0GVL5 298 aa3.73□□□□□ -1.81
HTT-210ENST00000512909 C2orf92A0A1B0GVN3 265 aa3.73□□□□□ -1.81
HTT-210ENST00000512909 C17orf105B2RV13 164 aa3.73□□□□□ -1.81
HTT-210ENST00000512909 C2CD4DB7Z1M9 353 aa3.73□□□□□ -1.81
HTT-210ENST00000512909 NPIPA3F8WFD2 350 aa3.73□□□□□ -1.81
HTT-210ENST00000512909 M0R296 226 aa3.73□□□□□ -1.81
HTT-210ENST00000512909 CYB561D2O14569 222 aa3.73□□□□□ -1.81
HTT-210ENST00000512909 FPGTO14772 594 aa3.73□□□□□ -1.81
HTT-210ENST00000512909 ADAM12O43184 909 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms