RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 OR7G3Q8NG95 312 aa11.58□□□□□ -0.56
VEGFA-216ENST00000512683 NEIL3Q8TAT5 605 aa11.58□□□□□ -0.56
VEGFA-216ENST00000512683 EXT2Q93063 718 aa11.58□□□□□ -0.56
VEGFA-216ENST00000512683 C16orf45Q96MC5 204 aaPredicted RBP11.58□□□□□ -0.56
VEGFA-216ENST00000512683 RASSF1Q9NS23 344 aa11.58□□□□□ -0.56
VEGFA-216ENST00000512683 NUDT4Q9NZJ9 180 aa11.58□□□□□ -0.56
VEGFA-216ENST00000512683 MTRF1LQ9UGC7 380 aaKnown RBP11.58□□□□□ -0.56
VEGFA-216ENST00000512683 ACOT9Q9Y305 439 aa11.58□□□□□ -0.56
VEGFA-216ENST00000512683 CELSR1Q9NYQ6 3014 aa11.58□□□□□ -0.56
VEGFA-216ENST00000512683 NF1P21359 2839 aa11.58□□□□□ -0.56
VEGFA-216ENST00000512683 A0A0G2JMM0 328 aa11.57□□□□□ -0.56
VEGFA-216ENST00000512683 A0A1W2PPB8 328 aa11.57□□□□□ -0.56
VEGFA-216ENST00000512683 A0A1W2PRS3 328 aa11.57□□□□□ -0.56
VEGFA-216ENST00000512683 KIR3DP1A8MWS1 328 aa11.57□□□□□ -0.56
VEGFA-216ENST00000512683 TP53I11O14683 189 aa11.57□□□□□ -0.56
VEGFA-216ENST00000512683 PROM1O43490 865 aa11.57□□□□□ -0.56
VEGFA-216ENST00000512683 FGF17O60258 216 aa11.57□□□□□ -0.56
VEGFA-216ENST00000512683 UGDHO60701 494 aa11.57□□□□□ -0.56
VEGFA-216ENST00000512683 ZNF354AO60765 605 aaPredicted RBP11.57□□□□□ -0.56
VEGFA-216ENST00000512683 KRT38O76015 456 aa11.57□□□□□ -0.56
VEGFA-216ENST00000512683 URI1O94763 535 aaPredicted RBP11.57□□□□□ -0.56
VEGFA-216ENST00000512683 TGFB1P01137 390 aa11.57□□□□□ -0.56
VEGFA-216ENST00000512683 C2P06681 752 aa11.57□□□□□ -0.56
VEGFA-216ENST00000512683 FBXO45P0C2W1 286 aa11.57□□□□□ -0.56
VEGFA-216ENST00000512683 EPB42P16452 691 aa11.57□□□□□ -0.56
VEGFA-216ENST00000512683 CEACAM8P31997 349 aaPredicted RBP11.57□□□□□ -0.56
VEGFA-216ENST00000512683 ADH7P40394 386 aa11.57□□□□□ -0.56
VEGFA-216ENST00000512683 SSR2P43308 183 aa11.57□□□□□ -0.56
VEGFA-216ENST00000512683 KCNJ2P63252 427 aa11.57□□□□□ -0.56
VEGFA-216ENST00000512683 RPP38P78345 283 aaKnown RBP11.57□□□□□ -0.56
VEGFA-216ENST00000512683 PHEXP78562 749 aa11.57□□□□□ -0.56
VEGFA-216ENST00000512683 NTRK2Q16620 822 aa11.57□□□□□ -0.56
VEGFA-216ENST00000512683 MROH9Q5TGP6 573 aa11.57□□□□□ -0.56
VEGFA-216ENST00000512683 LIPJQ5W064 366 aa11.57□□□□□ -0.56
VEGFA-216ENST00000512683 TMEM198Q66K66 360 aa11.57□□□□□ -0.56
VEGFA-216ENST00000512683 GRHL2Q6ISB3 625 aa11.57□□□□□ -0.56
VEGFA-216ENST00000512683 ADGRD1Q6QNK2 874 aa11.57□□□□□ -0.56
VEGFA-216ENST00000512683 LYPD8Q6UX82 237 aa11.57□□□□□ -0.56
VEGFA-216ENST00000512683 TBC1D1Q86TI0 1168 aaPredicted RBP11.57□□□□□ -0.56
VEGFA-216ENST00000512683 KIF18BQ86Y91 864 aa11.57□□□□□ -0.56
VEGFA-216ENST00000512683 LIX1LQ8IVB5 337 aa11.57□□□□□ -0.56
VEGFA-216ENST00000512683 ULK2Q8IYT8 1036 aa11.57□□□□□ -0.56
VEGFA-216ENST00000512683 LIX1Q8N485 282 aa11.57□□□□□ -0.56
VEGFA-216ENST00000512683 UBTD2Q8WUN7 234 aa11.57□□□□□ -0.56
VEGFA-216ENST00000512683 KCTD4Q8WVF5 259 aa11.57□□□□□ -0.56
VEGFA-216ENST00000512683 RNASE6Q93091 150 aaKnown RBP11.57□□□□□ -0.56
VEGFA-216ENST00000512683 REPS1Q96D71 796 aa11.57□□□□□ -0.56
VEGFA-216ENST00000512683 MBD6Q96DN6 1003 aa11.57□□□□□ -0.56
VEGFA-216ENST00000512683 MRRFQ96E11 262 aaKnown RBP11.57□□□□□ -0.56
VEGFA-216ENST00000512683 GPR78Q96P69 363 aa11.57□□□□□ -0.56
VEGFA-216ENST00000512683 POLDIP3Q9BY77 421 aaKnown RBP11.57□□□□□ -0.56
VEGFA-216ENST00000512683 ZNF703Q9H7S9 590 aaPredicted RBP11.57□□□□□ -0.56
VEGFA-216ENST00000512683 WDR41Q9HAD4 459 aa11.57□□□□□ -0.56
VEGFA-216ENST00000512683 SNX15Q9NRS6 342 aa11.57□□□□□ -0.56
VEGFA-216ENST00000512683 LYARQ9NX58 379 aaKnown RBP11.57□□□□□ -0.56
VEGFA-216ENST00000512683 ALKBH4Q9NXW9 302 aa11.57□□□□□ -0.56
VEGFA-216ENST00000512683 NINJ2Q9NZG7 142 aa11.57□□□□□ -0.56
VEGFA-216ENST00000512683 OPTCQ9UBM4 332 aa11.57□□□□□ -0.56
VEGFA-216ENST00000512683 DMGDHQ9UI17 866 aaKnown RBP11.57□□□□□ -0.56
VEGFA-216ENST00000512683 ST6GALNAC2Q9UJ37 374 aa11.57□□□□□ -0.56
VEGFA-216ENST00000512683 LIPGQ9Y5X9 500 aa11.57□□□□□ -0.56
VEGFA-216ENST00000512683 SYCE1LA8MT33 242 aa11.56□□□□□ -0.56
VEGFA-216ENST00000512683 SUPT3HB4E1H0 165 aa11.56□□□□□ -0.56
VEGFA-216ENST00000512683 G3V3Y1 287 aa11.56□□□□□ -0.56
VEGFA-216ENST00000512683 SUPT3HO75486 399 aa11.56□□□□□ -0.56
VEGFA-216ENST00000512683 NADKO95544 446 aaPredicted RBP11.56□□□□□ -0.56
VEGFA-216ENST00000512683 ALDOAP04075 364 aaKnown RBP11.56□□□□□ -0.56
VEGFA-216ENST00000512683 SLC35E2P0CK97 266 aa11.56□□□□□ -0.56
VEGFA-216ENST00000512683 DNASE1P24855 282 aa11.56□□□□□ -0.56
VEGFA-216ENST00000512683 PIGAP37287 484 aa11.56□□□□□ -0.56
VEGFA-216ENST00000512683 NR0B1P51843 470 aaKnown RBP11.56□□□□□ -0.56
VEGFA-216ENST00000512683 RAP1GDS1P52306 607 aa11.56□□□□□ -0.56
VEGFA-216ENST00000512683 PPP2R2AP63151 447 aa11.56□□□□□ -0.56
VEGFA-216ENST00000512683 CUL3Q13618 768 aa11.56□□□□□ -0.56
VEGFA-216ENST00000512683 WHAMMP3Q1A5X7 153 aa11.56□□□□□ -0.56
VEGFA-216ENST00000512683 NHSL2Q5HYW2 709 aa11.56□□□□□ -0.56
VEGFA-216ENST00000512683 C10orf62Q5T681 223 aaPredicted RBP11.56□□□□□ -0.56
VEGFA-216ENST00000512683 RELL1Q8IUW5 271 aa11.56□□□□□ -0.56
VEGFA-216ENST00000512683 LACC1Q8IV20 430 aa11.56□□□□□ -0.56
VEGFA-216ENST00000512683 C9orf40Q8IXQ3 194 aa11.56□□□□□ -0.56
VEGFA-216ENST00000512683 MMGT1Q8N4V1 131 aa11.56□□□□□ -0.56
VEGFA-216ENST00000512683 NOA1Q8NC60 698 aaKnown RBP11.56□□□□□ -0.56
VEGFA-216ENST00000512683 C17orf47Q8NEP4 570 aa11.56□□□□□ -0.56
VEGFA-216ENST00000512683 GOT1L1Q8NHS2 421 aaPredicted RBP11.56□□□□□ -0.56
VEGFA-216ENST00000512683 RHEBL1Q8TAI7 183 aa11.56□□□□□ -0.56
VEGFA-216ENST00000512683 ALPK1Q96QP1 1244 aa11.56□□□□□ -0.56
VEGFA-216ENST00000512683 FUT8Q9BYC5 575 aa11.56□□□□□ -0.56
VEGFA-216ENST00000512683 CLEC4MQ9H2X3 399 aaPredicted RBP11.56□□□□□ -0.56
VEGFA-216ENST00000512683 ACSS3Q9H6R3 686 aa11.56□□□□□ -0.56
VEGFA-216ENST00000512683 DDX31Q9H8H2 851 aaKnown RBP11.56□□□□□ -0.56
VEGFA-216ENST00000512683 SEMA4BQ9NPR2 832 aaPredicted RBP11.56□□□□□ -0.56
VEGFA-216ENST00000512683 FETUBQ9UGM5 382 aa11.56□□□□□ -0.56
VEGFA-216ENST00000512683 CHCHD2Q9Y6H1 151 aaPredicted RBP11.56□□□□□ -0.56
VEGFA-216ENST00000512683 ABCA2Q9BZC7 2435 aa11.55□□□□□ -0.56
VEGFA-216ENST00000512683 A0A087X1B8 175 aa11.55□□□□□ -0.56
VEGFA-216ENST00000512683 H0YIV9 168 aa11.55□□□□□ -0.56
VEGFA-216ENST00000512683 FOXE1O00358 373 aaPredicted RBP11.55□□□□□ -0.56
VEGFA-216ENST00000512683 RTCAO00442 366 aaKnown RBP11.55□□□□□ -0.56
VEGFA-216ENST00000512683 OR10H2O60403 315 aa11.55□□□□□ -0.56
VEGFA-216ENST00000512683 TRIM3O75382 744 aaPredicted RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms